FFCP PHASE1:Hg19::chr2:242194488..242194506,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3069|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4857|TSSclassifier=N|UniProt=|association_with_transcript=308bp_to_ENST00000498595_5end|description=CAGE_peak_10_at_HDLBP_5end|id=chr2:242194488..242194506,-|ontology_enrichment_celltype=CL:0000055!1.39e-09!180;CL:0000680!8.09e-08!57;CL:0000056!8.09e-08!57;CL:0000355!8.09e-08!57;CL:0000359!7.83e-07!32;CL:0000187!8.55e-07!54|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000680,5.60e-07,58;CL:0000056,5.60e-07,58;CL:0000355,5.60e-07,58|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2394;2.81e-07;14|ontology_enrichment_disease_v019_2=DOID:2394,2.26e-07,14|ontology_enrichment_uberon=UBERON:0000914!6.65e-09!83;UBERON:0002329!6.65e-09!83;UBERON:0003077!6.65e-09!83;UBERON:0003059!6.65e-09!83;UBERON:0007282!6.65e-09!83;UBERON:0009618!6.65e-09!83;UBERON:0007285!6.65e-09!83;UBERON:0004290!1.84e-07!70;UBERON:0005256!2.54e-07!143;UBERON:0001134!6.47e-07!61;UBERON:0002036!6.47e-07!61;UBERON:0003082!6.47e-07!61|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.11e-07,73;UBERON:0005256,2.11e-07,122;UBERON:0002329,4.08e-07,71;UBERON:0003059,4.08e-07,71;UBERON:0007282,4.08e-07,71;UBERON:0004290,4.08e-07,71;UBERON:0009618,4.08e-07,71;UBERON:0003077,6.41e-07,72;UBERON:0007285,6.41e-07,72;UBERON:0001134,9.11e-07,62;UBERON:0002036,9.11e-07,62;UBERON:0003082,9.11e-07,62;UBERON:0001637,9.92e-07,42;UBERON:0003509,9.92e-07,42;UBERON:0004572,9.92e-07,42|phase1_expression=0.363356758541113,3.21150785836475,0.845726424575827,0,1.34088328328186,1.74467704820074,2.53299878168311,0.631719873426831,0.522371256399677,0.245733936501509,0,0.218441372130172,0.263766978228454,1.23766352960047,1.65698687863958,3.36162573225888,3.01347264011988,2.19093027116212,1.95173119516203,0,0.204000691244253,0,0.572471974262113,0.684372125364421,0.376627918784408,0.534893840235659,0.57470412614962,0.708397031823113,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0.200544447470142,0,0.447830948479849,0.647787332037959,0,0.290796477559129,0.377875943688809,0,0,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0.188242339542605,0.545812300115692,0.224723484445085,0.306083892370903,0,0.639337125799041,0,0.398927315243264,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0,0,0.211255286311942,0,0.419317291016752,0,0.150176892841506,0,0,0.19891667719909,0,1.75996244461323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17903228824749,0,0,0,0,0,0.111410456885174,0,0,0,0,0.260118695119756,0.493313713811028,0,0.289803085735052,0,0,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.767175371061182,0,0.50133791063589,1.59331170856906,0.795285947051099,1.94653948121054,0.283604451492204,1.99556457716308,0.790513071238134,0.130979075497713,0,0.370784442784429,0,0.348259474598534,1.06366368415092,0.476981248610684,0,0,0.198762407366705,0,0,0,0,2.20094433552054,0.835979866147242,0.516833518338658,0.71153252537342,0.66944122552934,0,0,0,0,2.43042584364528,0.17859945656816,0.22452937262617,0,0,0,0.732806975721629,0,0,0,0.496971951695318,1.77282716330412,0.132409180813219,1.43418310374407,0.709336764396714,0.560677600142307,1.06748995729705,1.2333377420858,0,0.538842688278752,0.653847612453835,0.454072282934794,5.18558332031999,0.468642863667593,0.312160076830321,0,1.19558944441441,0.704606991862589,0.647491777472526,0.842704840213491,0,1.71968044236475,0.929932030581889,0,2.22540236350701,0,0,0.841680569770331,0.625592599359821,0.554128230968366,0.438977620880838,2.14541457059314,1.35214253015937,1.02088964844019,0,1.2813443329114,0.423863802319124,0,0.92747276314595,0.515281080091258,0.744467425326359,0.506328996723799,0.68205903612839,0.757301322732344,0.736399189138395,0.323292113637624,0,0.302256294682921,1.01736355386293,0.386521706326594,0.545492241181669,0,0.121973706129595,0.265059536642971,0.580969714347592,0.829288440122964,0.756962552626885,0,1.56449532329816,4.5026865673502,0,1.39310378409594,3.60939740834793,1.0647612003586,0,0.482022059766964,1.8749975364507,0.435758888184812,0.71181185733329,1.21348177344148,0.392442930250692,1.92373578473195,1.4763109092493,0,0.4115740113314,0,5.07020139287323,0.982827216677626,1.18157981336281,0,0,0.857839051492628,0.329250856225877,0,0.904760751704678,0.740707561268237,0.651616610620649,0,1.44331342025273,0.115930404975077,0,0.288732895522148,1.38895653772983,0.761016608938393,2.37061319387782,1.71697232418975,0,0.468008530278475,0.594524649154913,0,0.16798212819886,0.567100388969546,0.447792613514241,0,0,0,0.088048434013226,0,0.144119953416961,0,0.063497894292169,0,1.17217447210047,0,0.102827492703324,0.300343057843917,0.571652865261156,0,0.43596006883328,0.1466765716419,0.646358578788889,0,0.845302752556,1.06375246633948,1.04007436911366,0,0,0.532844358032199,0.142977993658148,0.542621605391443,0,0.325736184293735,1.42156779497018,0,0,1.74306691720059,0.7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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3069 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4857 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=308bp_to_ENST00000498595_5end | |||
|description=CAGE_peak_10_at_HDLBP_5end | |||
|id=chr2:242194488..242194506,- | |||
|ontology_enrichment_celltype=CL:0000055!1.39e-09!180;CL:0000680!8.09e-08!57;CL:0000056!8.09e-08!57;CL:0000355!8.09e-08!57;CL:0000359!7.83e-07!32;CL:0000187!8.55e-07!54 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,5.60e-07,58;CL:0000056,5.60e-07,58;CL:0000355,5.60e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;2.81e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.26e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!6.65e-09!83;UBERON:0002329!6.65e-09!83;UBERON:0003077!6.65e-09!83;UBERON:0003059!6.65e-09!83;UBERON:0007282!6.65e-09!83;UBERON:0009618!6.65e-09!83;UBERON:0007285!6.65e-09!83;UBERON:0004290!1.84e-07!70;UBERON:0005256!2.54e-07!143;UBERON:0001134!6.47e-07!61;UBERON:0002036!6.47e-07!61;UBERON:0003082!6.47e-07!61 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.11e-07,73;UBERON:0005256,2.11e-07,122;UBERON:0002329,4.08e-07,71;UBERON:0003059,4.08e-07,71;UBERON:0007282,4.08e-07,71;UBERON:0004290,4.08e-07,71;UBERON:0009618,4.08e-07,71;UBERON:0003077,6.41e-07,72;UBERON:0007285,6.41e-07,72;UBERON:0001134,9.11e-07,62;UBERON:0002036,9.11e-07,62;UBERON:0003082,9.11e-07,62;UBERON:0001637,9.92e-07,42;UBERON:0003509,9.92e-07,42;UBERON:0004572,9.92e-07,42 | |||
|phase1_expression=0.363356758541113,3.21150785836475,0.845726424575827,0,1.34088328328186,1.74467704820074,2.53299878168311,0.631719873426831,0.522371256399677,0.245733936501509,0,0.218441372130172,0.263766978228454,1.23766352960047,1.65698687863958,3.36162573225888,3.01347264011988,2.19093027116212,1.95173119516203,0,0.204000691244253,0,0.572471974262113,0.684372125364421,0.376627918784408,0.534893840235659,0.57470412614962,0.708397031823113,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0.200544447470142,0,0.447830948479849,0.647787332037959,0,0.290796477559129,0.377875943688809,0,0,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0.188242339542605,0.545812300115692,0.224723484445085,0.306083892370903,0,0.639337125799041,0,0.398927315243264,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0,0,0.211255286311942,0,0.419317291016752,0,0.150176892841506,0,0,0.19891667719909,0,1.75996244461323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17903228824749,0,0,0,0,0,0.111410456885174,0,0,0,0,0.260118695119756,0.493313713811028,0,0.289803085735052,0,0,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.767175371061182,0,0.50133791063589,1.59331170856906,0.795285947051099,1.94653948121054,0.283604451492204,1.99556457716308,0.790513071238134,0.130979075497713,0,0.370784442784429,0,0.348259474598534,1.06366368415092,0.476981248610684,0,0,0.198762407366705,0,0,0,0,2.20094433552054,0.835979866147242,0.516833518338658,0.71153252537342,0.66944122552934,0,0,0,0,2.43042584364528,0.17859945656816,0.22452937262617,0,0,0,0.732806975721629,0,0,0,0.496971951695318,1.77282716330412,0.132409180813219,1.43418310374407,0.709336764396714,0.560677600142307,1.06748995729705,1.2333377420858,0,0.538842688278752,0.653847612453835,0.454072282934794,5.18558332031999,0.468642863667593,0.312160076830321,0,1.19558944441441,0.704606991862589,0.647491777472526,0.842704840213491,0,1.71968044236475,0.929932030581889,0,2.22540236350701,0,0,0.841680569770331,0.625592599359821,0.554128230968366,0.438977620880838,2.14541457059314,1.35214253015937,1.02088964844019,0,1.2813443329114,0.423863802319124,0,0.92747276314595,0.515281080091258,0.744467425326359,0.506328996723799,0.68205903612839,0.757301322732344,0.736399189138395,0.323292113637624,0,0.302256294682921,1.01736355386293,0.386521706326594,0.545492241181669,0,0.121973706129595,0.265059536642971,0.580969714347592,0.829288440122964,0.756962552626885,0,1.56449532329816,4.5026865673502,0,1.39310378409594,3.60939740834793,1.0647612003586,0,0.482022059766964,1.8749975364507,0.435758888184812,0.71181185733329,1.21348177344148,0.392442930250692,1.92373578473195,1.4763109092493,0,0.4115740113314,0,5.07020139287323,0.982827216677626,1.18157981336281,0,0,0.857839051492628,0.329250856225877,0,0.904760751704678,0.740707561268237,0.651616610620649,0,1.44331342025273,0.115930404975077,0,0.288732895522148,1.38895653772983,0.761016608938393,2.37061319387782,1.71697232418975,0,0.468008530278475,0.594524649154913,0,0.16798212819886,0.567100388969546,0.447792613514241,0,0,0,0.088048434013226,0,0.144119953416961,0,0.063497894292169,0,1.17217447210047,0,0.102827492703324,0.300343057843917,0.571652865261156,0,0.43596006883328,0.1466765716419,0.646358578788889,0,0.845302752556,1.06375246633948,1.04007436911366,0,0,0.532844358032199,0.142977993658148,0.542621605391443,0,0.325736184293735,1.42156779497018,0,0,1.74306691720059,0.799783929456456,1.2162378064119,0.502257091432126,0,0.718874566474748,0,0,1.88215698667853,1.64381058040307,1.07436577943937,0.224170287987055,0,0,0.128343036279748,0,0,0,0.502548796003046,0,0,0,0.414415513436035,0.49076596687656,1.00034104211935,1.35632511849868,1.66376689224646,4.99601168632053,1.73472656537328,1.05427273493442,0.601892199455438,4.5481500811197,0,0.664225598535437,1.10621501125022,1.12948698808508,0,0.686286847621712,0,0,0,0,0,0,0.744323423456331,1.07423381301644,3.08726103876381,0.768834895534206,0.511707249066704,1.44768529029247,0,2.31314540703983,1.24293207719189,0.0821271560138091,3.63478100428535,1.04589340613963,0.120859449591622,1.60405176242628,0.276242966807689,0.803701137152247,2.73136752010076,1.83574180943194,0.451199612907412,0.308061348417659,0,0,0.949964660035881,0,0,0.431831832204279,0,0.270946437543853,0,0,0.831076008928724,0,0,0.261435451024901,0.769350375349168,0.328014645699706,0.325378394664303,0.103041011647722,0.732555718546747,0.330037999682352,0.574265537996172,0.650060246036521,0,0.193341436584244,0.924291702687866,0.460511024178389,0.413509717453592,0.429680979473094,3.0453505721988,0.93749290157711,0.356128142586949,0.165284915360978,1.53752053892085,0.382838137483752,0.50578890427775,2.32422774648643,0.94443704049192,0,1.23213432070436,0.532306030317022,0.869932992075073,0.18532421910392,2.00374841438788,0.744316738719335,1.2655176988749,0.953150969619124,0,0.855877976067841,0.318203247925937,0.78494864019923,1.2591072030832,2.19629623788844,0.706874414074119,0.606547444719948,1.58510321173008,0.842516912477962,0.48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| |||
|short_description=p10@HDLBP | |||
}} |
Revision as of 17:50, 12 September 2013
Short description: | p10@HDLBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_HDLBP_5end |
Coexpression cluster: | NA |
Association with transcript: | 308bp_to_ENST00000498595_5end |
EntrezGene: | HDLBP |
HGNC: | 4857 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 5.60e-07 | 58 |
myoblast | 5.60e-07 | 58 |
multi-potent skeletal muscle stem cell | 5.60e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 2.11e-07 | 73 |
trunk mesenchyme | 2.11e-07 | 122 |
somite | 4.08e-07 | 71 |
presomitic mesoderm | 4.08e-07 | 71 |
presumptive segmental plate | 4.08e-07 | 71 |
dermomyotome | 4.08e-07 | 71 |
trunk paraxial mesoderm | 4.08e-07 | 71 |
paraxial mesoderm | 6.41e-07 | 72 |
presumptive paraxial mesoderm | 6.41e-07 | 72 |
skeletal muscle tissue | 9.11e-07 | 62 |
striated muscle tissue | 9.11e-07 | 62 |
myotome | 9.11e-07 | 62 |
artery | 9.92e-07 | 42 |
arterial blood vessel | 9.92e-07 | 42 |
arterial system | 9.92e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.26e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.