FFCP PHASE1:Hg19::chr2:65794002..65794044,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:65794002..65794044,+|id=chr2:65794002..65794044,+|ontology_enrichment_celltype=CL:0002076!5.46e-14!43;CL:0000066!1.64e-12!254;CL:0000223!1.09e-10!59;CL:0002159!7.11e-10!13;CL:0002251!7.11e-10!21;CL:0000622!9.32e-10!5;CL:0000221!1.15e-09!71;CL:0002274!1.37e-09!5;CL:0000457!1.37e-09!5;CL:0002191!1.37e-09!5;CL:0000097!1.37e-09!5;CL:0000831!1.37e-09!5;CL:0002028!1.37e-09!5;CL:0002077!2.64e-09!33;CL:0000154!5.17e-08!6;CL:0002368!2.56e-07!13|ontology_enrichment_celltype_v019=CL:0000622;2.17e-15;5!CL:0002251;1.65e-14;20!CL:0000154;6.36e-13;6!CL:0002166;3.46e-12;3!CL:0002623;6.22e-12;3!CL:0002336;1.42e-09;1!CL:0002261;1.42e-09;1!CL:0002252;1.42e-09;1!CL:0002170;1.42e-09;1!CL:0002327;2.31e-09;4!CL:0000150;8.63e-09;9!CL:0002076;3.44e-08;42!CL:0000097;8.24e-08;5|ontology_enrichment_celltype_v019_2=CL:0000622,1.50e-15,5;CL:0002251,1.76e-14,20;CL:0000154,4.68e-13,6;CL:0002166,3.99e-12,3;CL:0002623,5.58e-12,3;CL:0002252,1.62e-09,1;CL:0002327,1.92e-09,4;CL:0002336,2.08e-09,1;CL:0002261,2.08e-09,1;CL:0002170,2.08e-09,1;CL:0002076,5.98e-09,42;CL:0000150,7.05e-09,9;CL:0000066,1.29e-08,253;CL:0000223,3.47e-08,58;CL:0000097,7.98e-08,5;CL:0002028,7.98e-08,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1749!1.02e-15!14|ontology_enrichment_disease_v019=DOID:3151;4.26e-10;1!DOID:3149;4.26e-10;1!DOID:1749;7.15e-10;14|ontology_enrichment_disease_v019_2=DOID:3151,4.46e-10,1;DOID:3149,4.46e-10,1;DOID:1749,7.33e-10,14|ontology_enrichment_uberon=UBERON:0003729!2.30e-09!5;UBERON:0000166!3.00e-08!21;UBERON:0001004!5.31e-08!72;UBERON:0003343!1.01e-07!4;UBERON:0004785!1.01e-07!4;UBERON:0000924!6.41e-07!173;UBERON:0006601!6.41e-07!173;UBERON:0004121!7.60e-07!169;UBERON:0000165!9.81e-07!28;UBERON:0000930!9.81e-07!28|ontology_enrichment_uberon_v019=UBERON:0003343;1.87e-09;4!UBERON:0004785;1.87e-09;4!UBERON:0001911;2.31e-09;4!UBERON:0001708;2.31e-09;4!UBERON:0008895;2.31e-09;4!UBERON:0011159;1.17e-07;5!UBERON:0000165;2.69e-07;28!UBERON:0000161;3.13e-07;19!UBERON:0000166;3.13e-07;19|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.76e-09,4;UBERON:0004785,1.76e-09,4;UBERON:0001911,1.92e-09,4;UBERON:0005333,1.92e-09,4;UBERON:0008425,1.92e-09,4;UBERON:0005311,1.92e-09,4;UBERON:0001708,2.57e-09,4;UBERON:0008895,2.57e-09,4;UBERON:0011159,1.27e-07,5;UBERON:0000165,4.95e-07,29;UBERON:0000930,4.95e-07,29|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,1.0429658368404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.221729397462564,0,0,0.728590576585084,0,0,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0,0.573609190778008,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.658501712451753,0,0.804231779293047,1.11106134190236,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0.468008530278475,0,2.81201501960331,0.839910640994298,1.13420077793909,2.23896306757121,1.74380363108377,0.766765358330422,0.985326475791887,2.99364675644969,0.414656231081544,0.720599767084807,2.27236380167484,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0.601519410909855,0.552485933615378,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,1.72279661398852,0.650060246036521,0,0,0,0,0,0,0,0,0,0.495854746082934,0,1.91419068741876,0.2023155617111,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962221127255121,0.670302275535787,0,0,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0,0.614321404198464,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0,0,0,0,0,0,0,0,0,0,1.39423744278603,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.783939179315021,0.34823682632161,0.17472666824203,0,0,0,0,0,0,0,0,0,0.1266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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:65794002..65794044,+ | |||
|id=chr2:65794002..65794044,+ | |||
|ontology_enrichment_celltype=CL:0002076!5.46e-14!43;CL:0000066!1.64e-12!254;CL:0000223!1.09e-10!59;CL:0002159!7.11e-10!13;CL:0002251!7.11e-10!21;CL:0000622!9.32e-10!5;CL:0000221!1.15e-09!71;CL:0002274!1.37e-09!5;CL:0000457!1.37e-09!5;CL:0002191!1.37e-09!5;CL:0000097!1.37e-09!5;CL:0000831!1.37e-09!5;CL:0002028!1.37e-09!5;CL:0002077!2.64e-09!33;CL:0000154!5.17e-08!6;CL:0002368!2.56e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000622;2.17e-15;5!CL:0002251;1.65e-14;20!CL:0000154;6.36e-13;6!CL:0002166;3.46e-12;3!CL:0002623;6.22e-12;3!CL:0002336;1.42e-09;1!CL:0002261;1.42e-09;1!CL:0002252;1.42e-09;1!CL:0002170;1.42e-09;1!CL:0002327;2.31e-09;4!CL:0000150;8.63e-09;9!CL:0002076;3.44e-08;42!CL:0000097;8.24e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,1.50e-15,5;CL:0002251,1.76e-14,20;CL:0000154,4.68e-13,6;CL:0002166,3.99e-12,3;CL:0002623,5.58e-12,3;CL:0002252,1.62e-09,1;CL:0002327,1.92e-09,4;CL:0002336,2.08e-09,1;CL:0002261,2.08e-09,1;CL:0002170,2.08e-09,1;CL:0002076,5.98e-09,42;CL:0000150,7.05e-09,9;CL:0000066,1.29e-08,253;CL:0000223,3.47e-08,58;CL:0000097,7.98e-08,5;CL:0002028,7.98e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.02e-15!14 | |||
|ontology_enrichment_disease_v019=DOID:3151;4.26e-10;1!DOID:3149;4.26e-10;1!DOID:1749;7.15e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.46e-10,1;DOID:3149,4.46e-10,1;DOID:1749,7.33e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0003729!2.30e-09!5;UBERON:0000166!3.00e-08!21;UBERON:0001004!5.31e-08!72;UBERON:0003343!1.01e-07!4;UBERON:0004785!1.01e-07!4;UBERON:0000924!6.41e-07!173;UBERON:0006601!6.41e-07!173;UBERON:0004121!7.60e-07!169;UBERON:0000165!9.81e-07!28;UBERON:0000930!9.81e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;1.87e-09;4!UBERON:0004785;1.87e-09;4!UBERON:0001911;2.31e-09;4!UBERON:0001708;2.31e-09;4!UBERON:0008895;2.31e-09;4!UBERON:0011159;1.17e-07;5!UBERON:0000165;2.69e-07;28!UBERON:0000161;3.13e-07;19!UBERON:0000166;3.13e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.76e-09,4;UBERON:0004785,1.76e-09,4;UBERON:0001911,1.92e-09,4;UBERON:0005333,1.92e-09,4;UBERON:0008425,1.92e-09,4;UBERON:0005311,1.92e-09,4;UBERON:0001708,2.57e-09,4;UBERON:0008895,2.57e-09,4;UBERON:0011159,1.27e-07,5;UBERON:0000165,4.95e-07,29;UBERON:0000930,4.95e-07,29 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,1.0429658368404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.221729397462564,0,0,0.728590576585084,0,0,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0,0.573609190778008,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.658501712451753,0,0.804231779293047,1.11106134190236,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0.468008530278475,0,2.81201501960331,0.839910640994298,1.13420077793909,2.23896306757121,1.74380363108377,0.766765358330422,0.985326475791887,2.99364675644969,0.414656231081544,0.720599767084807,2.27236380167484,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0.601519410909855,0.552485933615378,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,1.72279661398852,0.650060246036521,0,0,0,0,0,0,0,0,0,0.495854746082934,0,1.91419068741876,0.2023155617111,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962221127255121,0.670302275535787,0,0,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0,0.614321404198464,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0,0,0,0,0,0,0,0,0,0,1.39423744278603,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.783939179315021,0.34823682632161,0.17472666824203,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0.288109595976299,0,0.235694034616795,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,3.35434687599266,0,0,0,0,2.68681276247223,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0.276697269872462,0.249960815924213,0.606596470166591,0.285465333544967,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0.184105950251841,0.419638523158333,0.622077260032973,0,0,0.471797825567689,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47221577751538,8.25788063434183,0.733714394086716,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828864656652147,1.53646629384555,1.38251932362818,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0.178553938605658,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,1.09265571963696,1.0135880080915,0.305966489225945,1.60330443159336,0.827054095813604,0.50141507858475,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0.684466602170562,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr2:65794002..65794044,+ | |||
}} |
Revision as of 19:22, 12 September 2013
Short description: | p@chr2:65794002..65794044, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:65794002..65794044, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 1.50e-15 | 5 |
epithelial cell of alimentary canal | 1.76e-14 | 20 |
protein secreting cell | 4.68e-13 | 6 |
epithelial cell of Malassez | 3.99e-12 | 3 |
acinar cell of salivary gland | 5.58e-12 | 3 |
epithelial cell of esophagus | 1.62e-09 | 1 |
mammary gland epithelial cell | 1.92e-09 | 4 |
buccal mucosa cell | 2.08e-09 | 1 |
endothelial cell of viscerocranial mucosa | 2.08e-09 | 1 |
keratinized cell of the oral mucosa | 2.08e-09 | 1 |
endo-epithelial cell | 5.98e-09 | 42 |
glandular epithelial cell | 7.05e-09 | 9 |
epithelial cell | 1.29e-08 | 253 |
endodermal cell | 3.47e-08 | 58 |
mast cell | 7.98e-08 | 5 |
basophil mast progenitor cell | 7.98e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.76e-09 | 4 |
respiratory system mucosa | 1.76e-09 | 4 |
mammary gland | 1.92e-09 | 4 |
mammary bud | 1.92e-09 | 4 |
mammary ridge | 1.92e-09 | 4 |
mammary placode | 1.92e-09 | 4 |
jaw skeleton | 2.57e-09 | 4 |
splanchnocranium | 2.57e-09 | 4 |
primary subdivision of cranial skeletal system | 1.27e-07 | 5 |
mouth | 4.95e-07 | 29 |
stomodeum | 4.95e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.46e-10 | 1 |
keratoacanthoma | 4.46e-10 | 1 |
squamous cell carcinoma | 7.33e-10 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.