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FFCP PHASE1:Mm9::chr11:59953568..59953582,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=19377|HGNC=|UniProt=Q61818,Q5QGZ6,B1AU86|association_with_transcript=-1bp_to_ENSMUST00000171108,NM_001037764,uc007jfl.1,uc007jfm.1_5end|description=CAGE_peak_11_at_Rai1_5end|id=chr11:59953568..59953582,+|ontology_enrichment_celltype=CL:0000221!9.73e-08!44;CL:0000133!9.73e-08!44;CL:0002319!2.57e-07!43|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.86e-10!102;UBERON:0000924!2.86e-10!102;UBERON:0006601!2.86e-10!102;UBERON:0001017!7.79e-10!73;UBERON:0005743!7.79e-10!73;UBERON:0002346!9.48e-10!71;UBERON:0003075!9.48e-10!71;UBERON:0007284!9.48e-10!71;UBERON:0000073!1.70e-09!75;UBERON:0001016!1.70e-09!75;UBERON:0000033!1.28e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.44e-08,95;UBERON:0000924,2.44e-08,95;UBERON:0006601,2.44e-08,95;UBERON:0000970,3.13e-08,9;UBERON:0000019,3.13e-08,9;UBERON:0000047,3.13e-08,9;UBERON:0010312,3.13e-08,9;UBERON:0004088,3.13e-08,9;UBERON:0002104,3.13e-08,9;UBERON:0001456,3.13e-08,9;UBERON:0003072,3.13e-08,9;UBERON:0004128,3.13e-08,9;UBERON:0003071,3.13e-08,9;UBERON:0000020,7.37e-08,12;UBERON:0001032,7.37e-08,12;UBERON:0004456,7.37e-08,12;UBERON:0001894,1.69e-07,10;UBERON:0006222,1.69e-07,10;UBERON:0000033,3.58e-07,13;UBERON:0005085,3.58e-07,13;UBERON:0000007,6.93e-07,8;UBERON:0003296,6.93e-07,8;UBERON:0010133,6.93e-07,8;UBERON:0002346,8.27e-07,64;UBERON:0003075,8.27e-07,64;UBERON:0007284,8.27e-07,64|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,3.12956537739216,0.65407546914134,0.878744730937887,0.58328969722285,0.699932108126813,0,0,0,0,0.257259436035947,0,0.515672092277442,1.82084814773638,0.528990979272033,1.26766280701236,2.03306719241479,0.889294796111139,0,0,0,0.299600110518405,1.53687322128622,0.311068836925433,0.405017814995072,0.210324961351382,0.571301968807607,0.441737081903227,0.244981598429908,0.191690942036473,0,0,0.127687338085188,0.307213066512487,1.71452174049252,1.55528994124096,0.52091337055676,0.279182999001381,0.56276261003168,0.15279824777681,0.589257170947335,0.284743361598206,0.372798891650601,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0,0.681721290312231,0.519572009205738,0.70667914902068,1.12674735821344,2.56652954828636,0,7.11066703153331,1.08245520505607,1.01343946190039,0,0,0,0.445326417194474,0,0.304465478312141,0,0,0.705532242814229,0.125666591329675,0.741584903203122,0.144599356919912,0.884610551949874,0.485300549842228,0,0.969750506270444,0,0.878342391034642,0.83778682725382,0,0,0,0,0.149790639404823,0.457500602818626,0.125654352112864,0.347648640384553,0,1.24672826735736,0.162241263067758,0,0,0,0.631325567659422,1.82168620147785,1.14951052216736,0.900310649026746,0.60281927134286,2.04109497453984,1.2811372028485,1.40552586839593,1.29351685369508,2.37124792226126,0.378212160335639,0.351902248327898,0,0.278047249225598,0,0,0.199034266818493,0.702213187313235,0,0,0.828503090142008,0.938104239924385,0.720248245844059,0,0.590292695242212,0,0.232533944750408,0,0.233530684734339,0.329119699826961,0.492502392237286,0.162137619091711,0.146199987425332,0,0,0.420579897128254,0.720332286654991,0,0,0.639864751605702,0.696710015581316,0.515469845288373,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.758671603812327,0.571242563048644,0,0.610953983535943,0.969762435838129,0.841629838683823,0.189709611372772,0,0,0,0,0.166845105716094,0,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0.739012760666419,0.757965647081939,0.162964976442026,0.169745085775188,1.40814148973101,0.335012514883631,0.714130922658041,0.195133647857799,0.315270288212382,0.44292937929755,0.159454768657487,0,0.345369963731791,0.144649058581512,0,0,0,0,0.642202359951168,0.468846746368813,0,0.252470927204373,0.94652465824877,1.17131623288992,1.07711698866399,0.716906393857656,0.668396022247182,1.13230612315533,1.21443210502468,0.292255857911312,2.37172666767914,0,0.567760340833074,0.178065603667255,0.325773918707152,0.494910368917606,0,0.728341908464944,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0.712994756769443,0,0,0,3.06395645178409,2.88097750450096,1.29358683782755,0.857348140126369,0.532020700926821,1.07021290561242,0.493647061806363,1.8267896946876,1.17335854031855,3.38931313382112,0,0.16488625294148,0,0,0.119372344003136,0,0.291480836629851,1.11255181206306,0,0.412773735926445,0,0.188368457004691,0,0,0.339956859987711,0.279902904647316,0.138199973804424,0,0.790839983952838,0.203319467126849,0.216010681643603,0.418176592028937,0.655087691238533,0.404593039154462,0.495920734352016,0.26175594198403,0,0,0,0.448549638131936,0.827292452285488,1.16670713006429,0.387479470433193,0.844780627453891,1.17357238645754,1.0416350787516,0.314578033277133,0,0,0.316011120628178,0,0.205421914329655,0,0,0,0,0,0.100966449948148,0.228620419965,0,0,0,0.116876902181569,0.226730383615211,0.443971906748129,2.33256027184637,1.17519231454855,1.54551675225752,0.563047426353546,1.28206136987086,0,0,0,0.460325236507177,0.572895513439397,0.515559547031063,0,0,0,0,0,0,1.14166082342594,1.19707462020309,0.341467211508268,0.243106717068294,0.628839487883947,0.183843508450014,0.666740183404846,0.618105171716683,0.320919209591815,0.252697211763798,0.50695859978048,0.377252682772152,0.280924522409647,0.384150914429216,0.229741875822453,0.476293691283074,0.347652977834566,0.192909220463705,0,0.294397840268795,0.685738504770831,0.354951612318675,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0.365855945745545,0,0.679020569229309,0.561142271657738,0.355905054372522,0.29551344712669,0,0.619747364743864,0.385813221962283,0.749431733813838,0.233931608445408,0.429742108096597,0,0.220591419119515,0|short_description=p11@Rai1}}
|EntrezGene=19377
|HGNC=
|UniProt=Q61818,Q5QGZ6,B1AU86
|association_with_transcript=-1bp_to_ENSMUST00000171108,NM_001037764,uc007jfl.1,uc007jfm.1_5end
|description=CAGE_peak_11_at_Rai1_5end
|id=chr11:59953568..59953582,+
|ontology_enrichment_celltype=CL:0000221!9.73e-08!44;CL:0000133!9.73e-08!44;CL:0002319!2.57e-07!43
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!2.86e-10!102;UBERON:0000924!2.86e-10!102;UBERON:0006601!2.86e-10!102;UBERON:0001017!7.79e-10!73;UBERON:0005743!7.79e-10!73;UBERON:0002346!9.48e-10!71;UBERON:0003075!9.48e-10!71;UBERON:0007284!9.48e-10!71;UBERON:0000073!1.70e-09!75;UBERON:0001016!1.70e-09!75;UBERON:0000033!1.28e-07!63
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.44e-08,95;UBERON:0000924,2.44e-08,95;UBERON:0006601,2.44e-08,95;UBERON:0000970,3.13e-08,9;UBERON:0000019,3.13e-08,9;UBERON:0000047,3.13e-08,9;UBERON:0010312,3.13e-08,9;UBERON:0004088,3.13e-08,9;UBERON:0002104,3.13e-08,9;UBERON:0001456,3.13e-08,9;UBERON:0003072,3.13e-08,9;UBERON:0004128,3.13e-08,9;UBERON:0003071,3.13e-08,9;UBERON:0000020,7.37e-08,12;UBERON:0001032,7.37e-08,12;UBERON:0004456,7.37e-08,12;UBERON:0001894,1.69e-07,10;UBERON:0006222,1.69e-07,10;UBERON:0000033,3.58e-07,13;UBERON:0005085,3.58e-07,13;UBERON:0000007,6.93e-07,8;UBERON:0003296,6.93e-07,8;UBERON:0010133,6.93e-07,8;UBERON:0002346,8.27e-07,64;UBERON:0003075,8.27e-07,64;UBERON:0007284,8.27e-07,64
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,3.12956537739216,0.65407546914134,0.878744730937887,0.58328969722285,0.699932108126813,0,0,0,0,0.257259436035947,0,0.515672092277442,1.82084814773638,0.528990979272033,1.26766280701236,2.03306719241479,0.889294796111139,0,0,0,0.299600110518405,1.53687322128622,0.311068836925433,0.405017814995072,0.210324961351382,0.571301968807607,0.441737081903227,0.244981598429908,0.191690942036473,0,0,0.127687338085188,0.307213066512487,1.71452174049252,1.55528994124096,0.52091337055676,0.279182999001381,0.56276261003168,0.15279824777681,0.589257170947335,0.284743361598206,0.372798891650601,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0,0.681721290312231,0.519572009205738,0.70667914902068,1.12674735821344,2.56652954828636,0,7.11066703153331,1.08245520505607,1.01343946190039,0,0,0,0.445326417194474,0,0.304465478312141,0,0,0.705532242814229,0.125666591329675,0.741584903203122,0.144599356919912,0.884610551949874,0.485300549842228,0,0.969750506270444,0,0.878342391034642,0.83778682725382,0,0,0,0,0.149790639404823,0.457500602818626,0.125654352112864,0.347648640384553,0,1.24672826735736,0.162241263067758,0,0,0,0.631325567659422,1.82168620147785,1.14951052216736,0.900310649026746,0.60281927134286,2.04109497453984,1.2811372028485,1.40552586839593,1.29351685369508,2.37124792226126,0.378212160335639,0.351902248327898,0,0.278047249225598,0,0,0.199034266818493,0.702213187313235,0,0,0.828503090142008,0.938104239924385,0.720248245844059,0,0.590292695242212,0,0.232533944750408,0,0.233530684734339,0.329119699826961,0.492502392237286,0.162137619091711,0.146199987425332,0,0,0.420579897128254,0.720332286654991,0,0,0.639864751605702,0.696710015581316,0.515469845288373,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.758671603812327,0.571242563048644,0,0.610953983535943,0.969762435838129,0.841629838683823,0.189709611372772,0,0,0,0,0.166845105716094,0,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0.739012760666419,0.757965647081939,0.162964976442026,0.169745085775188,1.40814148973101,0.335012514883631,0.714130922658041,0.195133647857799,0.315270288212382,0.44292937929755,0.159454768657487,0,0.345369963731791,0.144649058581512,0,0,0,0,0.642202359951168,0.468846746368813,0,0.252470927204373,0.94652465824877,1.17131623288992,1.07711698866399,0.716906393857656,0.668396022247182,1.13230612315533,1.21443210502468,0.292255857911312,2.37172666767914,0,0.567760340833074,0.178065603667255,0.325773918707152,0.494910368917606,0,0.728341908464944,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0.712994756769443,0,0,0,3.06395645178409,2.88097750450096,1.29358683782755,0.857348140126369,0.532020700926821,1.07021290561242,0.493647061806363,1.8267896946876,1.17335854031855,3.38931313382112,0,0.16488625294148,0,0,0.119372344003136,0,0.291480836629851,1.11255181206306,0,0.412773735926445,0,0.188368457004691,0,0,0.339956859987711,0.279902904647316,0.138199973804424,0,0.790839983952838,0.203319467126849,0.216010681643603,0.418176592028937,0.655087691238533,0.404593039154462,0.495920734352016,0.26175594198403,0,0,0,0.448549638131936,0.827292452285488,1.16670713006429,0.387479470433193,0.844780627453891,1.17357238645754,1.0416350787516,0.314578033277133,0,0,0.316011120628178,0,0.205421914329655,0,0,0,0,0,0.100966449948148,0.228620419965,0,0,0,0.116876902181569,0.226730383615211,0.443971906748129,2.33256027184637,1.17519231454855,1.54551675225752,0.563047426353546,1.28206136987086,0,0,0,0.460325236507177,0.572895513439397,0.515559547031063,0,0,0,0,0,0,1.14166082342594,1.19707462020309,0.341467211508268,0.243106717068294,0.628839487883947,0.183843508450014,0.666740183404846,0.618105171716683,0.320919209591815,0.252697211763798,0.50695859978048,0.377252682772152,0.280924522409647,0.384150914429216,0.229741875822453,0.476293691283074,0.347652977834566,0.192909220463705,0,0.294397840268795,0.685738504770831,0.354951612318675,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0.365855945745545,0,0.679020569229309,0.561142271657738,0.355905054372522,0.29551344712669,0,0.619747364743864,0.385813221962283,0.749431733813838,0.233931608445408,0.429742108096597,0,0.220591419119515,0
|short_description=p11@Rai1
}}

Revision as of 20:12, 12 September 2013

Short description:p11@Rai1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_11_at_Rai1_5end
Coexpression cluster:NA
Association with transcript: -1bp_to_ENSMUST00000171108, NM_001037764, uc007jfl.1, uc007jfm.1_5end
EntrezGene:Rai1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p11@Rai1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C62.04
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E62.88
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G33.39
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.33
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure2.44e-0895
ectoderm2.44e-0895
presumptive ectoderm2.44e-0895
eye3.13e-089
camera-type eye3.13e-089
simple eye3.13e-089
immature eye3.13e-089
ocular region3.13e-089
visual system3.13e-089
face3.13e-089
optic cup3.13e-089
optic vesicle3.13e-089
eye primordium3.13e-089
sense organ7.37e-0812
sensory system7.37e-0812
entire sense organ system7.37e-0812
diencephalon1.69e-0710
future diencephalon1.69e-0710
head3.58e-0713
ectodermal placode3.58e-0713
pituitary gland6.93e-078
gland of diencephalon6.93e-078
neuroendocrine gland6.93e-078
neurectoderm8.27e-0764
neural plate8.27e-0764
presumptive neural plate8.27e-0764







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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