FFCP PHASE1:Mm9::chr11:60351491..60351576,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=268420|HGNC=|UniProt=Q3TSG4|association_with_transcript=11bp_to_ENSMUST00000044250_5end|description=CAGE_peak_1_at_Alkbh5_5end|id=chr11:60351491..60351576,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.03e-12!130;UBERON:0000925!1.03e-12!130;UBERON:0006595!1.03e-12!130;UBERON:0001007!1.35e-12!128;UBERON:0001555!1.35e-12!128;UBERON:0007026!1.35e-12!128;UBERON:0002405!1.51e-12!70;UBERON:0005057!1.52e-12!51;UBERON:0003929!1.96e-12!55;UBERON:0004921!2.32e-12!126;UBERON:0004185!2.32e-12!126;UBERON:0002530!4.46e-11!65;UBERON:0000949!1.10e-10!72;UBERON:0000926!9.34e-10!193;UBERON:0004120!9.34e-10!193;UBERON:0006603!9.34e-10!193;UBERON:0002365!5.06e-09!25;UBERON:0002330!5.06e-09!25;UBERON:0002368!5.37e-09!60;UBERON:0000490!2.14e-08!66;UBERON:0005911!4.36e-08!69;UBERON:0009854!6.21e-08!23;UBERON:0009856!6.21e-08!23;UBERON:0002107!8.00e-08!22;UBERON:0007499!8.00e-08!22;UBERON:0006925!8.00e-08!22;UBERON:0009497!8.00e-08!22;UBERON:0000015!8.00e-08!22;UBERON:0002423!8.00e-08!22;UBERON:0006235!8.00e-08!22;UBERON:0008835!8.00e-08!22;UBERON:0003894!8.00e-08!22;UBERON:0004161!8.00e-08!22;UBERON:0008836!8.00e-08!22;UBERON:0005172!1.34e-07!49;UBERON:0005173!1.34e-07!49;UBERON:0002417!1.34e-07!49;UBERON:0000916!1.34e-07!49;UBERON:0000077!1.50e-07!97;UBERON:0001041!4.16e-07!92;UBERON:0003104!9.29e-07!131;UBERON:0009142!9.29e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0003929,1.96e-12,55;UBERON:0002530,4.46e-11,65;UBERON:0000949,1.10e-10,72;UBERON:0004119,1.11e-10,118;UBERON:0000925,1.11e-10,118;UBERON:0006595,1.11e-10,118;UBERON:0001007,1.40e-10,116;UBERON:0001555,1.40e-10,116;UBERON:0007026,1.40e-10,116;UBERON:0004921,2.29e-10,114;UBERON:0002365,5.06e-09,25;UBERON:0002330,5.06e-09,25;UBERON:0002368,5.37e-09,60;UBERON:0000490,2.14e-08,66;UBERON:0005911,4.36e-08,69;UBERON:0009854,6.21e-08,23;UBERON:0009856,6.21e-08,23;UBERON:0002107,8.00e-08,22;UBERON:0007499,8.00e-08,22;UBERON:0006925,8.00e-08,22;UBERON:0009497,8.00e-08,22;UBERON:0000015,8.00e-08,22;UBERON:0002423,8.00e-08,22;UBERON:0006235,8.00e-08,22;UBERON:0008835,8.00e-08,22;UBERON:0003894,8.00e-08,22;UBERON:0004161,8.00e-08,22;UBERON:0008836,8.00e-08,22;UBERON:0005172,1.34e-07,49;UBERON:0005173,1.34e-07,49;UBERON:0002417,1.34e-07,49;UBERON:0000916,1.34e-07,49|phase1_expression=10.5698239089164,45.0178275854776,37.7649368693315,53.8386296126157,49.5886772646884,28.2037176811975,29.6688053556318,49.1959862312406,62.087826468885,73.496261265106,32.873849899297,32.9459016650739,48.9634087603248,52.3648210489794,36.3089640379072,27.7391116324062,48.2697695908421,34.8585692720853,37.0208970735495,42.014575528005,31.4660173558958,21.3475545081903,17.2391860831697,24.798825532978,24.31738379312,35.6023817751313,30.1533397311352,22.8399506647042,31.9239344686708,32.0078264795112,23.7251646401176,13.3356441426523,15.9916844771988,15.8481681015439,10.9763615505484,16.6234645358492,15.3127017196777,21.7636447983192,25.0027310247616,27.7467584306113,39.999741186109,38.9335926426314,30.5871522409627,11.9601977076798,13.4831318521954,10.2786181210542,3.12956537739216,11.1192829754028,12.5221124158649,10.8880743481599,10.6389680435276,12.9377307928474,58.2205643020345,62.3811442129756,48.7336008756573,14.9210472900849,18.0516067161417,19.5955395065428,8.29497489524351,11.1088105647127,10.1413024560989,13.8926258148344,8.89294796111139,31.496490104849,25.7105254267413,29.8401648277362,20.3728075152515,14.2160772968975,11.0947885170071,12.5555522648472,13.2504725651371,8.56952953211411,11.0434270475807,13.1065155160001,14.6643570657902,12.8690630125403,24.2254938198655,18.1316020080967,24.7306518542552,12.0016521834476,10.0636407962651,11.4600941522487,20.3803589271008,19.1339287410771,21.3917546887534,11.490514833473,10.1083893367363,9.13357284543973,21.2033341332915,14.5097395405028,34.204009666798,36.1378028332182,78.1967033763913,49.6526936306792,32.4888208723835,32.7059627581055,47.1893251642686,10.5666799998396,7.01422212427746,8.48014978824817,11.8308472612412,2.56652954828636,12.7402619853323,0,14.5048997477513,11.4011939463794,15.6712577954583,38.7083352247613,11.6522047641227,25.0867215019554,19.6038419245734,17.0500667854799,28.8269371570073,20.0461111934988,18.2262496060342,28.4006496405067,30.404981031328,19.2317144703483,45.9997487013935,22.8091258425847,37.1013751013461,23.7588874036259,27.9587641827183,21.958559775866,16.9651832518899,37.2967300604543,26.7187727648202,28.7953310876836,21.0936576941287,19.472783122627,22.8750301409313,13.1937069718508,15.6441888173049,15.8543583544805,17.454195743003,15.0884374653015,18.025567401506,26.9963126223902,27.0413351524032,33.0393713741764,14.4433691688601,13.3343220571414,12.6043490863744,15.3718914192429,12.5867523429957,14.476850392188,16.3041000733928,24.3181168494675,20.2633913356872,18.9106080167819,16.0115522989193,19.7276159184817,18.9072129473407,22.984642990463,16.46257091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| ||
|EntrezGene=268420 | |||
|HGNC= | |||
|UniProt=Q3TSG4 | |||
|association_with_transcript=11bp_to_ENSMUST00000044250_5end | |||
|description=CAGE_peak_1_at_Alkbh5_5end | |||
|id=chr11:60351491..60351576,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.03e-12!130;UBERON:0000925!1.03e-12!130;UBERON:0006595!1.03e-12!130;UBERON:0001007!1.35e-12!128;UBERON:0001555!1.35e-12!128;UBERON:0007026!1.35e-12!128;UBERON:0002405!1.51e-12!70;UBERON:0005057!1.52e-12!51;UBERON:0003929!1.96e-12!55;UBERON:0004921!2.32e-12!126;UBERON:0004185!2.32e-12!126;UBERON:0002530!4.46e-11!65;UBERON:0000949!1.10e-10!72;UBERON:0000926!9.34e-10!193;UBERON:0004120!9.34e-10!193;UBERON:0006603!9.34e-10!193;UBERON:0002365!5.06e-09!25;UBERON:0002330!5.06e-09!25;UBERON:0002368!5.37e-09!60;UBERON:0000490!2.14e-08!66;UBERON:0005911!4.36e-08!69;UBERON:0009854!6.21e-08!23;UBERON:0009856!6.21e-08!23;UBERON:0002107!8.00e-08!22;UBERON:0007499!8.00e-08!22;UBERON:0006925!8.00e-08!22;UBERON:0009497!8.00e-08!22;UBERON:0000015!8.00e-08!22;UBERON:0002423!8.00e-08!22;UBERON:0006235!8.00e-08!22;UBERON:0008835!8.00e-08!22;UBERON:0003894!8.00e-08!22;UBERON:0004161!8.00e-08!22;UBERON:0008836!8.00e-08!22;UBERON:0005172!1.34e-07!49;UBERON:0005173!1.34e-07!49;UBERON:0002417!1.34e-07!49;UBERON:0000916!1.34e-07!49;UBERON:0000077!1.50e-07!97;UBERON:0001041!4.16e-07!92;UBERON:0003104!9.29e-07!131;UBERON:0009142!9.29e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003929,1.96e-12,55;UBERON:0002530,4.46e-11,65;UBERON:0000949,1.10e-10,72;UBERON:0004119,1.11e-10,118;UBERON:0000925,1.11e-10,118;UBERON:0006595,1.11e-10,118;UBERON:0001007,1.40e-10,116;UBERON:0001555,1.40e-10,116;UBERON:0007026,1.40e-10,116;UBERON:0004921,2.29e-10,114;UBERON:0002365,5.06e-09,25;UBERON:0002330,5.06e-09,25;UBERON:0002368,5.37e-09,60;UBERON:0000490,2.14e-08,66;UBERON:0005911,4.36e-08,69;UBERON:0009854,6.21e-08,23;UBERON:0009856,6.21e-08,23;UBERON:0002107,8.00e-08,22;UBERON:0007499,8.00e-08,22;UBERON:0006925,8.00e-08,22;UBERON:0009497,8.00e-08,22;UBERON:0000015,8.00e-08,22;UBERON:0002423,8.00e-08,22;UBERON:0006235,8.00e-08,22;UBERON:0008835,8.00e-08,22;UBERON:0003894,8.00e-08,22;UBERON:0004161,8.00e-08,22;UBERON:0008836,8.00e-08,22;UBERON:0005172,1.34e-07,49;UBERON:0005173,1.34e-07,49;UBERON:0002417,1.34e-07,49;UBERON:0000916,1.34e-07,49 | |||
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| |||
|short_description=p1@Alkbh5 | |||
}} |
Revision as of 20:12, 12 September 2013
Short description: | p1@Alkbh5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Alkbh5_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_ENSMUST00000044250_5end |
EntrezGene: | Alkbh5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gut epithelium | 1.96e-12 | 55 |
gland | 4.46e-11 | 65 |
endocrine system | 1.10e-10 | 72 |
endoderm-derived structure | 1.11e-10 | 118 |
endoderm | 1.11e-10 | 118 |
presumptive endoderm | 1.11e-10 | 118 |
digestive system | 1.40e-10 | 116 |
digestive tract | 1.40e-10 | 116 |
primitive gut | 1.40e-10 | 116 |
subdivision of digestive tract | 2.29e-10 | 114 |
exocrine gland | 5.06e-09 | 25 |
exocrine system | 5.06e-09 | 25 |
endocrine gland | 5.37e-09 | 60 |
unilaminar epithelium | 2.14e-08 | 66 |
endo-epithelium | 4.36e-08 | 69 |
digestive tract diverticulum | 6.21e-08 | 23 |
sac | 6.21e-08 | 23 |
liver | 8.00e-08 | 22 |
epithelial sac | 8.00e-08 | 22 |
digestive gland | 8.00e-08 | 22 |
epithelium of foregut-midgut junction | 8.00e-08 | 22 |
anatomical boundary | 8.00e-08 | 22 |
hepatobiliary system | 8.00e-08 | 22 |
foregut-midgut junction | 8.00e-08 | 22 |
hepatic diverticulum | 8.00e-08 | 22 |
liver primordium | 8.00e-08 | 22 |
septum transversum | 8.00e-08 | 22 |
liver bud | 8.00e-08 | 22 |
abdomen element | 1.34e-07 | 49 |
abdominal segment element | 1.34e-07 | 49 |
abdominal segment of trunk | 1.34e-07 | 49 |
abdomen | 1.34e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.