FFCP PHASE1:Mm9::chr11:86570839..86570846,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67300|HGNC=|UniProt=E9Q434,Q68FD5|association_with_transcript=147bp_to_ENSMUST00000100663,NM_001003908,uc007kta.1_5end|description=CAGE_peak_4_at_Cltc_5end|id=chr11:86570839..86570846,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000222,8.83e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002021,6.40e-08,10;UBERON:0000411,6.40e-08,10;UBERON:0001950,6.40e-08,10;UBERON:0010314,2.66e-07,92;UBERON:0000073,3.06e-07,54|phase1_expression=0.640595388419176,0,0,0,0.500895729946347,0.33575854382378,0.467225281191051,0,0.703943610758334,1.17032263160997,0.34243593645101,0.159544317990673,0,0.0874204024189974,0.333109761815663,0.404950534779652,0.699561878128147,0.473193248037357,0.137114433605739,0,1.10556277196391,0.496454756004426,0.261199789138935,0.159992422793407,0.45881856213434,0,0.430761996159075,0.215471232685889,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,2.09265815368454,0.7813353445238,0.523523743973798,1.76469446409304,1.36609096991689,0.485510353031154,2.64383317748712,3.54819259268301,2.56965453026354,0,0,0,0,0,0,0.503347818173209,0,0.336093799142464,3.08711323243136,8.02293631828519,2.06268836910977,0.202316460859598,0,0,0,0,0,0.988866362566974,0.7104801149461,0,0,0.311068836925433,0,0.210324961351382,0.856952953211411,0.441737081903227,0.367472397644862,0.191690942036473,0,5.50579404996943,1.65993539510744,3.07213066512487,0,0.274462930807229,0.52091337055676,1.67509799400829,2.25105044012672,3.0559649555362,1.47314292736834,2.42031857358475,0.559198337475902,0.37863096666592,0.0755715601067855,1.15945795480671,0.860423876981386,1.3599426674155,0,0,0,0.842666520790511,5.28333999991979,3.63700406444016,2.12003744706204,1.83096445709685,2.56652954828636,0,7.11066703153331,0,0.253359865475099,0,0.79928715803342,0.517875767294343,1.03909497345377,1.04091196059682,0.608930956624282,0.230615497256059,0.904335843315735,0.587943535678524,1.88499886994513,0.988779870937496,19.5209131841881,0,0.970601099684455,1.10420759230197,0.484875253135222,0,2.04946557908083,2.51336048176146,0.510914110417183,0.838705871541442,1.79970819298022,0.635351135365324,4.34392854273986,1.37250180845588,0.376963056338593,1.73824320192276,1.53429274398198,3.1168206683934,2.27137768294861,0.611036183101898,0.497627882440372,0.758168275301024,0.841767423545896,0.780722657776222,0,0.180062129805349,0.60281927134286,0.544291993210623,0.640568601424249,0.468508622798644,1.55222022443409,0,0.189106080167819,0.879755620819744,0.876782929710299,0.278047249225598,0.696504333044333,0.411564272815887,0.199034266818493,0,1.80143534980301,0.568326998791185,0.621377317606506,0.469052119962192,0.540186184383045,1.18372367792605,0.787056926989615,1.54267112887378,0.930135779001631,1.3413670069981,1.28441876603886,0.987359099480883,1.97000956894914,1.29710095273369,1.16959989940266,0.658650345873152,1.34206418760372,1.68231958851302,1.13195073617213,0.991256348951394,0,0,0.464473343720877,0,0.201683524623343,0.667134131534611,0.380451252225118,0,0.329397909448022,0.754005626400808,0.596869416123452,0,0,0.432276099749388,0.597423819763102,0.379335801906163,0.456994050438915,0,0.610953983535943,0.581857461502877,0.561086559122548,1.01178459398812,0.738050739898011,1.41298855057237,0.863780147452604,0,0.333690211432188,0.786235980452812,0,0.202860121388503,0,0,0,1.29708181420028,0.549122826376163,0,0.744281895337007,0.624075346229121,0.252578877947112,0.358794827043824,0.964887042726734,0.184753190166605,0.37898282354097,0.162964976442026,0.169745085775188,0,0,0.476087281772027,0.975668239288994,0.315270288212382,0.44292937929755,0.159454768657487,0.491589944147214,0.345369963731791,0.867894351489069,1.50791283939272,0.54390568381871,0.491764273019036,1.65562047782839,5.29816946959713,2.34423373184406,1.96721934452011,2.01976741763498,1.57754109708128,0.390438744296638,1.29254038639679,0.477937595905104,0.445597348164788,0.566153061577665,0.404810701674894,0.876767573733936,0.395287777946524,2.57057053137446,1.13552068166615,0,0.651547837414304,0.989820737835213,0,0.485561272309963,0.302323556964751,0,0.590603785761546,0.614870295887855,1.29214146584111,1.09060118843252,0.356497378384721,0.632073515871632,1.05418608574999,0,1.02131881726136,0.36012218806262,0.517434735131018,0.214337035031592,0.709360934569094,0.535106452806212,0.493647061806363,0.608929898229199,1.87737366450968,1.90648863777438,0.661585194164886,0.16488625294148,0.807322133479528,1.93001359770099,0.358117032009409,0.492422699235184,0.582961673259701,5.7481843623258,0.854354403989263,0,0.925972636848558,0.376736914009382,0.27338845544205,0.457556346413045,1.69978429993855,2.51912614182584,2.21119958087078,0,0.316335993581135,0.203319467126849,0.108005340821801,0.418176592028937,0.87345025498471,0.404593039154462,0.330613822901344,0.523511883968059,0.777689839750757,0,1.69107881605257,0.29903309208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| ||
|EntrezGene=67300 | |||
|HGNC= | |||
|UniProt=E9Q434,Q68FD5 | |||
|association_with_transcript=147bp_to_ENSMUST00000100663,NM_001003908,uc007kta.1_5end | |||
|description=CAGE_peak_4_at_Cltc_5end | |||
|id=chr11:86570839..86570846,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,8.83e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,6.40e-08,10;UBERON:0000411,6.40e-08,10;UBERON:0001950,6.40e-08,10;UBERON:0010314,2.66e-07,92;UBERON:0000073,3.06e-07,54 | |||
|phase1_expression=0.640595388419176,0,0,0,0.500895729946347,0.33575854382378,0.467225281191051,0,0.703943610758334,1.17032263160997,0.34243593645101,0.159544317990673,0,0.0874204024189974,0.333109761815663,0.404950534779652,0.699561878128147,0.473193248037357,0.137114433605739,0,1.10556277196391,0.496454756004426,0.261199789138935,0.159992422793407,0.45881856213434,0,0.430761996159075,0.215471232685889,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,2.09265815368454,0.7813353445238,0.523523743973798,1.76469446409304,1.36609096991689,0.485510353031154,2.64383317748712,3.54819259268301,2.56965453026354,0,0,0,0,0,0,0.503347818173209,0,0.336093799142464,3.08711323243136,8.02293631828519,2.06268836910977,0.202316460859598,0,0,0,0,0,0.988866362566974,0.7104801149461,0,0,0.311068836925433,0,0.210324961351382,0.856952953211411,0.441737081903227,0.367472397644862,0.191690942036473,0,5.50579404996943,1.65993539510744,3.07213066512487,0,0.274462930807229,0.52091337055676,1.67509799400829,2.25105044012672,3.0559649555362,1.47314292736834,2.42031857358475,0.559198337475902,0.37863096666592,0.0755715601067855,1.15945795480671,0.860423876981386,1.3599426674155,0,0,0,0.842666520790511,5.28333999991979,3.63700406444016,2.12003744706204,1.83096445709685,2.56652954828636,0,7.11066703153331,0,0.253359865475099,0,0.79928715803342,0.517875767294343,1.03909497345377,1.04091196059682,0.608930956624282,0.230615497256059,0.904335843315735,0.587943535678524,1.88499886994513,0.988779870937496,19.5209131841881,0,0.970601099684455,1.10420759230197,0.484875253135222,0,2.04946557908083,2.51336048176146,0.510914110417183,0.838705871541442,1.79970819298022,0.635351135365324,4.34392854273986,1.37250180845588,0.376963056338593,1.73824320192276,1.53429274398198,3.1168206683934,2.27137768294861,0.611036183101898,0.497627882440372,0.758168275301024,0.841767423545896,0.780722657776222,0,0.180062129805349,0.60281927134286,0.544291993210623,0.640568601424249,0.468508622798644,1.55222022443409,0,0.189106080167819,0.879755620819744,0.876782929710299,0.278047249225598,0.696504333044333,0.411564272815887,0.199034266818493,0,1.80143534980301,0.568326998791185,0.621377317606506,0.469052119962192,0.540186184383045,1.18372367792605,0.787056926989615,1.54267112887378,0.930135779001631,1.3413670069981,1.28441876603886,0.987359099480883,1.97000956894914,1.29710095273369,1.16959989940266,0.658650345873152,1.34206418760372,1.68231958851302,1.13195073617213,0.991256348951394,0,0,0.464473343720877,0,0.201683524623343,0.667134131534611,0.380451252225118,0,0.329397909448022,0.754005626400808,0.596869416123452,0,0,0.432276099749388,0.597423819763102,0.379335801906163,0.456994050438915,0,0.610953983535943,0.581857461502877,0.561086559122548,1.01178459398812,0.738050739898011,1.41298855057237,0.863780147452604,0,0.333690211432188,0.786235980452812,0,0.202860121388503,0,0,0,1.29708181420028,0.549122826376163,0,0.744281895337007,0.624075346229121,0.252578877947112,0.358794827043824,0.964887042726734,0.184753190166605,0.37898282354097,0.162964976442026,0.169745085775188,0,0,0.476087281772027,0.975668239288994,0.315270288212382,0.44292937929755,0.159454768657487,0.491589944147214,0.345369963731791,0.867894351489069,1.50791283939272,0.54390568381871,0.491764273019036,1.65562047782839,5.29816946959713,2.34423373184406,1.96721934452011,2.01976741763498,1.57754109708128,0.390438744296638,1.29254038639679,0.477937595905104,0.445597348164788,0.566153061577665,0.404810701674894,0.876767573733936,0.395287777946524,2.57057053137446,1.13552068166615,0,0.651547837414304,0.989820737835213,0,0.485561272309963,0.302323556964751,0,0.590603785761546,0.614870295887855,1.29214146584111,1.09060118843252,0.356497378384721,0.632073515871632,1.05418608574999,0,1.02131881726136,0.36012218806262,0.517434735131018,0.214337035031592,0.709360934569094,0.535106452806212,0.493647061806363,0.608929898229199,1.87737366450968,1.90648863777438,0.661585194164886,0.16488625294148,0.807322133479528,1.93001359770099,0.358117032009409,0.492422699235184,0.582961673259701,5.7481843623258,0.854354403989263,0,0.925972636848558,0.376736914009382,0.27338845544205,0.457556346413045,1.69978429993855,2.51912614182584,2.21119958087078,0,0.316335993581135,0.203319467126849,0.108005340821801,0.418176592028937,0.87345025498471,0.404593039154462,0.330613822901344,0.523511883968059,0.777689839750757,0,1.69107881605257,0.299033092087958,0.165458490457098,0.388902376688095,0.387479470433193,0.506868376472335,0.352071715937262,0.13020438484395,0.419437377702843,0.724752362478018,0.576060012515731,0,0.608175645870493,0.513554785824136,0.77952493786677,0.179026695667481,0.596044064343795,0.240390899039938,0.295379054349154,0.807731599585181,0.228620419965,0.201652370273681,0.292373642219257,0.481059208201647,0.233753804363138,1.13365191807606,0.443971906748129,0.269141569828427,0.503653849092235,0.965947970160952,0.563047426353546,0.183151624267265,0.428736758158132,0,5.08276658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| |||
|short_description=p4@Cltc | |||
}} | |||
Revision as of 21:19, 12 September 2013
| Short description: | p4@Cltc |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Cltc_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 147bp_to_ENSMUST00000100663, NM_001003908, uc007kta.1_5end |
| EntrezGene: | Cltc |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mesodermal cell | 8.83e-07 | 7 |
| Ontology term | p-value | n |
|---|---|---|
| occipital lobe | 6.40e-08 | 10 |
| visual cortex | 6.40e-08 | 10 |
| neocortex | 6.40e-08 | 10 |
| structure with developmental contribution from neural crest | 2.66e-07 | 92 |
| regional part of nervous system | 3.06e-07 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
