FFCP PHASE1:Hg19::chr3:142338164..142338210,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C97|description=CAGE_peak_at_chr3:142338164..142338210,+|id=chr3:142338164..142338210,+|ontology_enrichment_celltype=CL:0000082!3.27e-08!19;CL:0002178!6.37e-07!3;CL:0002231!9.89e-07!3|ontology_enrichment_celltype_v019=CL:0000082;5.73e-08;19!CL:0000540;8.97e-07;6!CL:0000404;8.97e-07;6|ontology_enrichment_celltype_v019_2=CL:0000082,5.73e-08,19;CL:0000540,8.48e-07,6;CL:0000031,8.48e-07,6;CL:0000404,8.48e-07,6|ontology_enrichment_development_v019=CL:0000031;8.97e-07;6|ontology_enrichment_disease=DOID:0050615!2.29e-13!16;DOID:1324!1.39e-10!15;DOID:3493!2.02e-10!2;DOID:305!2.62e-08!106;DOID:0050687!6.53e-07!143;DOID:4556!7.60e-07!3|ontology_enrichment_disease_v019=DOID:0050619;7.06e-34;1!DOID:1357;7.06e-34;1!DOID:0050615;2.82e-19;16!DOID:1324;7.75e-10;15!DOID:5409;1.12e-09;4!DOID:4362;5.73e-08;5|ontology_enrichment_disease_v019_2=DOID:0050619,9.85e-34,1;DOID:1357,9.85e-34,1;DOID:0050615,3.00e-19,16;DOID:1324,7.75e-10,15;DOID:5409,1.12e-09,4;DOID:4362,5.73e-08,5|ontology_enrichment_uberon=UBERON:0005153!3.37e-10!37;UBERON:0004802!3.27e-08!19;UBERON:0000115!3.27e-08!19;UBERON:0005178!3.22e-07!34;UBERON:0002224!3.22e-07!34;UBERON:0002048!5.33e-07!22;UBERON:0000117!5.33e-07!22;UBERON:0000171!5.33e-07!22;UBERON:0000170!5.33e-07!22;UBERON:0005597!5.33e-07!22;UBERON:0000118!5.33e-07!22;UBERON:0005181!5.62e-07!35;UBERON:0004921!6.07e-07!129;UBERON:0004185!6.07e-07!129;UBERON:0005157!6.84e-07!51;UBERON:0001007!9.48e-07!155;UBERON:0001555!9.48e-07!155;UBERON:0007026!9.48e-07!155|ontology_enrichment_uberon_v019=UBERON:0001764;7.06e-34;1!UBERON:0001825;7.06e-34;1!UBERON:0004802;5.73e-08;19!UBERON:0000115;5.73e-08;19!UBERON:0002048;5.24e-07;22!UBERON:0004807;5.24e-07;22!UBERON:0000117;5.24e-07;22!UBERON:0000171;5.24e-07;22!UBERON:0000170;5.24e-07;22!UBERON:0000002;7.58e-07;6!UBERON:0001560;7.58e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0001764,9.85e-34,1;UBERON:0001825,9.85e-34,1;UBERON:0004802,5.73e-08,19;UBERON:0000115,5.73e-08,19;UBERON:0002048,5.24e-07,22;UBERON:0000117,5.24e-07,22;UBERON:0000171,5.24e-07,22;UBERON:0000170,5.24e-07,22;UBERON:0005597,5.24e-07,22;UBERON:0000118,5.24e-07,22;UBERON:0000002,7.58e-07,6;UBERON:0001560,7.58e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54657762555539,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0.276283915531148,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0.391102765469606,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0.105600336519406,0.717149357331379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36869470307464,0,0,0,0,0,0,0,0,0,0,0,0,1.25643277000187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0.111231401892069,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490751168076215,0.853425474875886,0,0,0,0,3.27515248846948,0,0,0,0,13.2847302338673,0.926089897295336,0,2.82190377816914,0,0.471353094203252,0,0,0,0,0,0,0,0,0,0.481448200135009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.162806537221949,0,0,0,0,0,0,0,0,0|short_description=p@chr3:142338164..142338210,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C97 | |||
|description=CAGE_peak_at_chr3:142338164..142338210,+ | |||
|id=chr3:142338164..142338210,+ | |||
|ontology_enrichment_celltype=CL:0000082!3.27e-08!19;CL:0002178!6.37e-07!3;CL:0002231!9.89e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000082;5.73e-08;19!CL:0000540;8.97e-07;6!CL:0000404;8.97e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000082,5.73e-08,19;CL:0000540,8.48e-07,6;CL:0000031,8.48e-07,6;CL:0000404,8.48e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;8.97e-07;6 | |||
|ontology_enrichment_disease=DOID:0050615!2.29e-13!16;DOID:1324!1.39e-10!15;DOID:3493!2.02e-10!2;DOID:305!2.62e-08!106;DOID:0050687!6.53e-07!143;DOID:4556!7.60e-07!3 | |||
|ontology_enrichment_disease_v019=DOID:0050619;7.06e-34;1!DOID:1357;7.06e-34;1!DOID:0050615;2.82e-19;16!DOID:1324;7.75e-10;15!DOID:5409;1.12e-09;4!DOID:4362;5.73e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,9.85e-34,1;DOID:1357,9.85e-34,1;DOID:0050615,3.00e-19,16;DOID:1324,7.75e-10,15;DOID:5409,1.12e-09,4;DOID:4362,5.73e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0005153!3.37e-10!37;UBERON:0004802!3.27e-08!19;UBERON:0000115!3.27e-08!19;UBERON:0005178!3.22e-07!34;UBERON:0002224!3.22e-07!34;UBERON:0002048!5.33e-07!22;UBERON:0000117!5.33e-07!22;UBERON:0000171!5.33e-07!22;UBERON:0000170!5.33e-07!22;UBERON:0005597!5.33e-07!22;UBERON:0000118!5.33e-07!22;UBERON:0005181!5.62e-07!35;UBERON:0004921!6.07e-07!129;UBERON:0004185!6.07e-07!129;UBERON:0005157!6.84e-07!51;UBERON:0001007!9.48e-07!155;UBERON:0001555!9.48e-07!155;UBERON:0007026!9.48e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;7.06e-34;1!UBERON:0001825;7.06e-34;1!UBERON:0004802;5.73e-08;19!UBERON:0000115;5.73e-08;19!UBERON:0002048;5.24e-07;22!UBERON:0004807;5.24e-07;22!UBERON:0000117;5.24e-07;22!UBERON:0000171;5.24e-07;22!UBERON:0000170;5.24e-07;22!UBERON:0000002;7.58e-07;6!UBERON:0001560;7.58e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,9.85e-34,1;UBERON:0001825,9.85e-34,1;UBERON:0004802,5.73e-08,19;UBERON:0000115,5.73e-08,19;UBERON:0002048,5.24e-07,22;UBERON:0000117,5.24e-07,22;UBERON:0000171,5.24e-07,22;UBERON:0000170,5.24e-07,22;UBERON:0005597,5.24e-07,22;UBERON:0000118,5.24e-07,22;UBERON:0000002,7.58e-07,6;UBERON:0001560,7.58e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54657762555539,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0.276283915531148,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0.391102765469606,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0.105600336519406,0.717149357331379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36869470307464,0,0,0,0,0,0,0,0,0,0,0,0,1.25643277000187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0.111231401892069,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490751168076215,0.853425474875886,0,0,0,0,3.27515248846948,0,0,0,0,13.2847302338673,0.926089897295336,0,2.82190377816914,0,0.471353094203252,0,0,0,0,0,0,0,0,0,0.481448200135009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:142338164..142338210,+ | |||
}} |
Revision as of 21:52, 12 September 2013
Short description: | p@chr3:142338164..142338210, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:142338164..142338210, + |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 5.73e-08 | 19 |
neuron | 8.48e-07 | 6 |
neuroblast | 8.48e-07 | 6 |
electrically signaling cell | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 9.85e-34 | 1 |
paranasal sinus | 9.85e-34 | 1 |
respiratory tract epithelium | 5.73e-08 | 19 |
lung epithelium | 5.73e-08 | 19 |
lung | 5.24e-07 | 22 |
respiratory tube | 5.24e-07 | 22 |
respiration organ | 5.24e-07 | 22 |
pair of lungs | 5.24e-07 | 22 |
lung primordium | 5.24e-07 | 22 |
lung bud | 5.24e-07 | 22 |
uterine cervix | 7.58e-07 | 6 |
neck of organ | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 9.85e-34 | 1 |
maxillary sinus cancer | 9.85e-34 | 1 |
respiratory system cancer | 3.00e-19 | 16 |
lung cancer | 7.75e-10 | 15 |
lung small cell carcinoma | 1.12e-09 | 4 |
cervical cancer | 5.73e-08 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.