FFCP PHASE1:Hg19::chr3:187463154..187463172,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C344 | |||
|description=CAGE_peak_at_chr3:187463154..187463172,- | |||
|id=chr3:187463154..187463172,- | |||
|ontology_enrichment_celltype=CL:0002057!1.35e-20!42;CL:0000766!9.18e-20!76;CL:0000738!1.35e-19!140;CL:0000860!3.91e-18!45;CL:0002031!1.76e-17!124;CL:0000839!8.20e-17!70;CL:0002009!2.42e-16!65;CL:0002087!2.51e-16!119;CL:0000557!6.78e-16!71;CL:0002194!8.12e-16!63;CL:0000576!8.12e-16!63;CL:0000040!8.12e-16!63;CL:0000559!8.12e-16!63;CL:0000037!3.12e-14!172;CL:0000566!3.12e-14!172;CL:0000988!7.10e-14!182;CL:0002032!8.61e-14!165;CL:0000837!8.61e-14!165;CL:0000763!3.48e-12!112;CL:0000049!3.48e-12!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.95e-19;33!CL:0002057;4.95e-19;33!CL:0000473;4.68e-16;39!CL:0000234;4.68e-16;39!CL:0000576;3.39e-13;48!CL:0000766;3.47e-11;69!CL:0000791;8.18e-08;18!CL:0000789;8.18e-08;18!CL:0002419;8.18e-08;18!CL:0002087;6.89e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.30e-26,72;CL:0000738,1.20e-25,136;CL:0000860,6.46e-25,42;CL:0002057,6.46e-25,42;CL:0000473,2.08e-24,48;CL:0000234,2.08e-24,48;CL:0002031,1.82e-23,120;CL:0000839,9.74e-23,66;CL:0002087,5.75e-22,115;CL:0002009,6.68e-22,61;CL:0000557,9.19e-22,67;CL:0002194,3.11e-21,59;CL:0000576,3.11e-21,59;CL:0000040,3.11e-21,59;CL:0000559,3.11e-21,59;CL:0002032,5.38e-20,161;CL:0000837,5.38e-20,161;CL:0000037,7.87e-20,168;CL:0000988,2.39e-19,177;CL:0000763,1.15e-17,108;CL:0000049,1.15e-17,108;CL:0000791,8.36e-08,18;CL:0000789,8.36e-08,18;CL:0002420,8.36e-08,18;CL:0002419,8.36e-08,18;CL:0000790,8.36e-08,18 | |||
|ontology_enrichment_development_v019=CL:0002057;1.02e-17;42!CL:0000790;8.18e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.09e-39!115;UBERON:0002390!2.07e-22!102;UBERON:0003061!2.07e-22!102;UBERON:0002193!6.08e-20!112;UBERON:0002371!3.04e-14!80;UBERON:0002405!4.70e-12!115;UBERON:0001049!6.45e-12!57;UBERON:0005068!6.45e-12!57;UBERON:0006241!6.45e-12!57;UBERON:0007135!6.45e-12!57;UBERON:0001474!1.94e-11!86;UBERON:0002616!1.03e-10!59;UBERON:0003080!1.45e-09!42;UBERON:0001017!2.90e-09!82;UBERON:0000178!4.09e-09!15;UBERON:0000179!4.09e-09!15;UBERON:0000463!4.09e-09!15;UBERON:0005743!5.07e-09!86;UBERON:0002780!5.09e-09!41;UBERON:0001890!5.09e-09!41;UBERON:0006240!5.09e-09!41;UBERON:0000955!1.85e-08!69;UBERON:0006238!1.85e-08!69;UBERON:0004765!4.01e-08!101;UBERON:0001434!4.01e-08!101;UBERON:0000073!7.25e-08!94;UBERON:0001016!7.25e-08!94;UBERON:0002020!1.98e-07!34;UBERON:0003528!1.98e-07!34;UBERON:0003075!3.56e-07!86;UBERON:0007284!3.56e-07!86;UBERON:0002346!3.65e-07!90;UBERON:0001893!7.11e-07!34;UBERON:0002791!9.21e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.76e-11;15!UBERON:0000179;3.76e-11;15!UBERON:0000463;3.76e-11;15!UBERON:0007023;1.01e-10;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.03e-43,114;UBERON:0002390,5.70e-30,98;UBERON:0003061,5.70e-30,98;UBERON:0002193,7.60e-27,108;UBERON:0002371,4.92e-19,76;UBERON:0002405,2.61e-18,93;UBERON:0001474,4.94e-16,82;UBERON:0004765,5.78e-14,90;UBERON:0000178,3.90e-11,15;UBERON:0000179,3.90e-11,15;UBERON:0000463,3.90e-11,15;UBERON:0001434,5.61e-11,100;UBERON:0001049,1.56e-10,56;UBERON:0005068,1.56e-10,56;UBERON:0006241,1.56e-10,56;UBERON:0007135,1.56e-10,56;UBERON:0000073,3.19e-09,53;UBERON:0002616,3.19e-09,53;UBERON:0003081,7.81e-09,203;UBERON:0002780,5.66e-08,41;UBERON:0001890,5.66e-08,41;UBERON:0003080,5.66e-08,41;UBERON:0006240,5.66e-08,41 | |||
|phase1_expression=0.54503513781167,1.92690471501885,1.26858963686374,3.00219895059391,1.78784437770915,0,0,1.26343974685366,4.17897005119742,0,0,0,0,0.866364470720326,0.662794751455832,0,0.602694528023977,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0.572471974262113,0.273748850145768,0.627713197974014,0,0,0,11.4075640286182,4.60595277716655,2.94150634300544,0,0.30120591877825,0,1.47187681102573,3.12772311472327,0.587200878669695,35.4557061460402,44.3203228909013,34.2877175731046,0.223915474239924,0.647787332037959,1.03030227053675,2.61716829803216,0.755751887377619,1.69808842831471,9.99444858694444,29.6040879375715,41.810360070839,133.489270037478,104.001246850815,104.525145610755,24.4769433322999,50.3478053195384,43.3364757101894,3.76484679085209,4.36649840092553,6.96642801779762,48.3612549946026,31.4510446534572,60.7370269509089,50.1373976283808,75.5967262385985,70.7533085884272,49.9159890441165,103.264110893787,150.100162007934,147.985463836222,118.898105399806,122.494508413686,27.2429776185016,64.8168639338114,78.4826720853393,3.38008458099107,9.56719349842696,4.82214884669265,7.52601828681517,6.15725260650176,5.14321877430656,3.42015292489498,4.17725022118089,3.47061892152804,0,0,0,1.28019066769952,0.800791974072025,0.574752439954483,2.64417949113945,1.90810750907073,1.1384259382189,1.76171156811282,1.14681968437569,2.64342657158052,9.52864557068611,0,3.14735632182133,6.28817220398664,5.14003747498773,32.9357395919636,5.54067853277104,3.31413464014313,11.6896037044747,33.6459579793224,7.9543595018206,4.87374568083967,3.24964636518019,49.0589754549336,50.0728488105531,37.6562801542418,42.2815527212348,15.9391697154279,4.74517002118593,4.0131124213457,3.1360657141493,10.7643875562688,3.44898444241729,1.71813722741315,2.27717722817553,8.91983160107471,6.51083453856419,8.55406840003537,2.10805166708882,1.53583933385302,12.4930726552346,8.76075832562862,9.03240796613151,6.45141578319144,5.08136371988664,4.48955652036677,2.43806866313962,1.34140171940727,0.383587685530591,0,1.50401373190767,1.15877215168659,0.795285947051099,7.78615792484217,0.189069634328136,0.665188192387692,0.351339142772504,3.86388272718252,0,0,64.584931337282,77.4877330981739,64.085736970093,2.38490624305342,0.571994910780128,0,0,0,0,0,0,0,0.417989933073621,0,0,0,0,0.760272105718513,0,0,0,0.0892997282840798,0,0,1.53316637465883,0,0.183201743930407,35.5807127077371,31.022421131866,0.436094052142534,0,0.379891534993739,5.16395805171553,2.0078563452417,0.354668382198357,0.560677600142307,0,0,0.933633106199299,0.67355336034844,0.490385709340376,0.454072282934794,1.15235184896,0,0,0,0.597794722207204,0,0,0,0.61246251376468,0.122834317311768,1.23990937410919,1.18800285728205,0,0,0.718618141816238,0,0,0,0,0,0.300476117813194,0.113432183160021,0,0.640672166455702,0.211931901159562,0.300091096084402,0.103052529238439,0.772921620136887,0.18611685633159,0.843881661206331,0.194874010322397,0,0.736399189138395,0,1.06502877754984,0.10075209822764,0.169560592310488,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,6.03678306441573,6.49691533502627,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,2.94848165003288,6.49868897349544,0.441463099414651,0,0.343135620597051,0,0,0.100528972411631,0,0.325808305310325,0,0,0.115930404975077,0,0,1.38895653772983,0.761016608938393,0,0,4.43190610957315,7.02012795417713,9.21513206190115,0,0,0.283550194484773,0,0,0,3.94130590316755,0,2.69526550203004,10.9531164596891,2.27236380167484,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0.07333828582095,0.387815147273333,7.15312891703765,0,0.26593811658487,0,0.257207374262142,0,0,1.28680194292333,1.08524321078289,0,0.325736184293735,0.710783897485092,0,0,0,0.599837947092342,4.86495122564762,0.502257091432126,0,0.239624855491583,0,0,0.434343920002738,0.410952645100767,0.358121926479791,13.8985578551974,8.27529192848094,3.88129634747131,8.08561128562415,0,0,0.773288812777695,0.837581326671744,1.27587750330633,193.99281920232,131.631042049771,283.045795676812,1.34960640891054,6.00204625271613,0,0.207970861530807,0.356857977594324,0.315404830067869,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0.195801157462741,0.686286847621712,5.16920065307218,26.3171324998713,7.36420148843766,0,0,0,0.496215615637554,0.767309866440312,0,1.02511319404561,0.511707249066704,0.160853921143607,0,0,0,0.328508624055237,0,0.232420756919918,0.241718899183244,0,0.0920809889358963,0.918515585316854,0,1.18011973463482,0,0.385076685522074,0,0,0.316654886678627,0,0,0,0,0.270946437543853,0,0,0,0,10.085954325713,9.15024078587152,0.512900250232778,0,0.650756789328606,49.356644579259,0,0,0,0,1.6068392984416,0.676695028044854,0.616194468458578,0.460511024178389,0.689182862422653,2.14840489736547,1.59518363305651,0.511359764496605,0,0,0.192190067365106,0.127612712494584,0.30347334256665,0,0.31481234683064,0,0.616067160352178,0,0,0,0,0.372158369359667,0.949138274156178,2.47819252100972,0.255897791311334,0.42793898803392,0.95460974377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| |||
|short_description=p@chr3:187463154..187463172,- | |||
}} |
Revision as of 23:13, 12 September 2013
Short description: | p@chr3:187463154..187463172, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:187463154..187463172, - |
Coexpression cluster: | C344_Neutrophils_CD14_Eosinophils_Whole_blood_CD14CD16_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
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