FFCP PHASE1:Mm9::chr13:83711251..83711276,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:83711251..83711276,-|id=chr13:83711251..83711276,-|ontology_enrichment_celltype=CL:0000988!1.22e-07!32;CL:0002032!1.22e-07!32;CL:0000037!1.22e-07!32;CL:0000566!1.22e-07!32;CL:0000837!1.22e-07!32|ontology_enrichment_celltype_v019_2=CL:0000945,3.20e-07,1;CL:0000236,3.20e-07,1;CL:0000826,3.20e-07,1;CL:0000034,3.33e-07,97;CL:0000213,3.67e-07,1;CL:0002078,3.67e-07,1;CL:0000115,3.67e-07,1;CL:0002262,3.67e-07,1;CL:1000398,3.67e-07,1|ontology_enrichment_disease=DOID:0060100!8.27e-07!3;DOID:4045!8.27e-07!3|ontology_enrichment_disease_v019_2=DOID:0060100,8.99e-19,3;DOID:4045,8.99e-19,3;DOID:0050686,1.13e-09,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002394,3.67e-07,1;UBERON:0001281,3.67e-07,1;UBERON:0000353,3.67e-07,1;UBERON:0003497,3.67e-07,1;UBERON:0003909,3.67e-07,1;UBERON:0003928,3.67e-07,1;UBERON:0003835,3.67e-07,1;UBERON:0003513,3.67e-07,1;UBERON:0001280,3.67e-07,1;UBERON:0004647,3.67e-07,1;UBERON:0002294,3.67e-07,1;UBERON:0001173,3.67e-07,1;UBERON:0004912,3.67e-07,1;UBERON:0005171,3.67e-07,1|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0.171200729931206,0,0,0.202475267389826,0,0.788655413395594,0.548457734422955,0,0.0850432901510698,0.794327609607082,1.04479915655574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.9042019680025,10.9386948233332,2.09409497589519,20.5881020810855,11.6117732442936,8.25367600152961,0,0,0,0,0,0,0,0,0,3.85899993932794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47837386442013,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838705871541442,1.79970819298022,1.01656181658452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0.278047249225598,0,0,0,0,1.54408744268829,0.284163499395593,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0.0810688095458557,0.292399974850665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0.228778173206523,3.90950388985867,6.01791244991729,2.76399947608848,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p@chr13:83711251..83711276,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:83711251..83711276,- | |||
|id=chr13:83711251..83711276,- | |||
|ontology_enrichment_celltype=CL:0000988!1.22e-07!32;CL:0002032!1.22e-07!32;CL:0000037!1.22e-07!32;CL:0000566!1.22e-07!32;CL:0000837!1.22e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.20e-07,1;CL:0000236,3.20e-07,1;CL:0000826,3.20e-07,1;CL:0000034,3.33e-07,97;CL:0000213,3.67e-07,1;CL:0002078,3.67e-07,1;CL:0000115,3.67e-07,1;CL:0002262,3.67e-07,1;CL:1000398,3.67e-07,1 | |||
|ontology_enrichment_disease=DOID:0060100!8.27e-07!3;DOID:4045!8.27e-07!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,8.99e-19,3;DOID:4045,8.99e-19,3;DOID:0050686,1.13e-09,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,3.67e-07,1;UBERON:0001281,3.67e-07,1;UBERON:0000353,3.67e-07,1;UBERON:0003497,3.67e-07,1;UBERON:0003909,3.67e-07,1;UBERON:0003928,3.67e-07,1;UBERON:0003835,3.67e-07,1;UBERON:0003513,3.67e-07,1;UBERON:0001280,3.67e-07,1;UBERON:0004647,3.67e-07,1;UBERON:0002294,3.67e-07,1;UBERON:0001173,3.67e-07,1;UBERON:0004912,3.67e-07,1;UBERON:0005171,3.67e-07,1 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0.171200729931206,0,0,0.202475267389826,0,0.788655413395594,0.548457734422955,0,0.0850432901510698,0.794327609607082,1.04479915655574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.9042019680025,10.9386948233332,2.09409497589519,20.5881020810855,11.6117732442936,8.25367600152961,0,0,0,0,0,0,0,0,0,3.85899993932794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47837386442013,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838705871541442,1.79970819298022,1.01656181658452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0.278047249225598,0,0,0,0,1.54408744268829,0.284163499395593,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0.0810688095458557,0.292399974850665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0.228778173206523,3.90950388985867,6.01791244991729,2.76399947608848,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr13:83711251..83711276,- | |||
}} |
Revision as of 01:10, 13 September 2013
Short description: | p@chr13:83711251..83711276, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:83711251..83711276, - |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.20e-07 | 1 |
B cell | 3.20e-07 | 1 |
pro-B cell | 3.20e-07 | 1 |
stem cell | 3.33e-07 | 97 |
lining cell | 3.67e-07 | 1 |
meso-epithelial cell | 3.67e-07 | 1 |
endothelial cell | 3.67e-07 | 1 |
endothelial cell of sinusoid | 3.67e-07 | 1 |
endothelial cell of hepatic sinusoid | 3.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bile duct | 3.67e-07 | 1 |
hepatic sinusoid | 3.67e-07 | 1 |
parenchyma | 3.67e-07 | 1 |
abdomen blood vessel | 3.67e-07 | 1 |
sinusoid | 3.67e-07 | 1 |
digestive system duct | 3.67e-07 | 1 |
abdominal segment blood vessel | 3.67e-07 | 1 |
trunk blood vessel | 3.67e-07 | 1 |
liver parenchyma | 3.67e-07 | 1 |
liver lobule | 3.67e-07 | 1 |
biliary system | 3.67e-07 | 1 |
biliary tree | 3.67e-07 | 1 |
biliary bud | 3.67e-07 | 1 |
hepatic duct | 3.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 8.99e-19 | 3 |
muscle cancer | 8.99e-19 | 3 |
organ system cancer | 1.13e-09 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.