FFCP PHASE1:Hg19::chr4:138450850..138450867,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C4371|description=CAGE_peak_at_chr4:138450850..138450867,-|id=chr4:138450850..138450867,-|ontology_enrichment_celltype=CL:0000057!1.17e-25!75;CL:0002620!3.63e-23!23;CL:0000055!2.09e-13!180;CL:0000197!3.14e-08!6;CL:0000098!3.14e-08!6;CL:0002167!3.14e-08!6;CL:0002556!5.38e-08!6;CL:0002552!2.91e-07!5;CL:0002580!8.08e-07!3|ontology_enrichment_celltype_v019=CL:0002620;1.75e-25;23!CL:0002195;1.57e-09;2!CL:0002571;1.57e-09;2!CL:0002570;2.45e-09;8!CL:0000057;1.30e-07;73|ontology_enrichment_celltype_v019_2=CL:0002620,1.68e-25,23;CL:0000057,2.92e-10,76;CL:0002195,1.86e-09,2;CL:0002571,1.86e-09,2;CL:0002570,2.45e-09,8|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:17!2.86e-11!5;DOID:450!2.86e-11!5;DOID:66!2.86e-11!5;DOID:423!2.86e-11!5;DOID:0080000!2.86e-11!5;DOID:11722!2.86e-11!5|ontology_enrichment_disease_v019=DOID:17;4.39e-14;5!DOID:450;4.39e-14;5!DOID:66;4.39e-14;5!DOID:423;4.39e-14;5!DOID:0080000;4.39e-14;5!DOID:11722;4.39e-14;5|ontology_enrichment_disease_v019_2=DOID:17,3.84e-14,5;DOID:450,3.84e-14,5;DOID:66,3.84e-14,5;DOID:423,3.84e-14,5;DOID:0080000,3.84e-14,5;DOID:11722,3.84e-14,5|ontology_enrichment_uberon=UBERON:0003102!6.35e-21!95;UBERON:0002097!7.22e-13!40;UBERON:0002199!2.69e-12!45;UBERON:0002416!2.69e-12!45;UBERON:0001758!5.38e-08!6;UBERON:0003672!5.38e-08!6;UBERON:0000475!2.72e-07!365|ontology_enrichment_uberon_v019=UBERON:0002097;6.09e-12;41!UBERON:0002199;1.85e-10;46!UBERON:0002416;1.85e-10;46!UBERON:0003102;3.71e-08;50|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.88e-14,41;UBERON:0002199,1.06e-12,46;UBERON:0002416,1.06e-12,46;UBERON:0003102,8.98e-08,99|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0.298897361103602,0.117434498643765,0,0.140450806702248,0,0.245668634623536,0.309977343527296,3.56400857184616,0.741800787835671,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0.438977620880838,0,0.150238058906597,0.113432183160021,1.25572744982203,0.85422955527427,0.211931901159562,1.80054657650641,0.412210116953756,0.772921620136887,0.18611685633159,1.18143432568886,1.94874010322397,2.27190396819703,0.460249493211497,0,1.06502877754984,0.403008392910561,0.508681776931463,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797814349754612,0,0,0,0,1.14382394926518,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0,0.415941723061614,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0.280660094433074,0.128139149255701,0,0,0,0.308419387605311,0,0,0,0,0,0,0,0.574072240823034,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0.165018999841176,0.574265537996172,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,0.987884678879706,0,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.193978032976839,0.706049013532002,0,0,0,0,0,0,0,0,0,6.41404938529128,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0.276697269872462,0,0,0,0,0,0,0,0.467426619694449,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40376993627955,2.02049693259551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0.352675943690684,1.531227386766,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0.207216164163037,0.85359238546975,0,0,0,0,0.4233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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4371 | |||
|description=CAGE_peak_at_chr4:138450850..138450867,- | |||
|id=chr4:138450850..138450867,- | |||
|ontology_enrichment_celltype=CL:0000057!1.17e-25!75;CL:0002620!3.63e-23!23;CL:0000055!2.09e-13!180;CL:0000197!3.14e-08!6;CL:0000098!3.14e-08!6;CL:0002167!3.14e-08!6;CL:0002556!5.38e-08!6;CL:0002552!2.91e-07!5;CL:0002580!8.08e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.75e-25;23!CL:0002195;1.57e-09;2!CL:0002571;1.57e-09;2!CL:0002570;2.45e-09;8!CL:0000057;1.30e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.68e-25,23;CL:0000057,2.92e-10,76;CL:0002195,1.86e-09,2;CL:0002571,1.86e-09,2;CL:0002570,2.45e-09,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.86e-11!5;DOID:450!2.86e-11!5;DOID:66!2.86e-11!5;DOID:423!2.86e-11!5;DOID:0080000!2.86e-11!5;DOID:11722!2.86e-11!5 | |||
|ontology_enrichment_disease_v019=DOID:17;4.39e-14;5!DOID:450;4.39e-14;5!DOID:66;4.39e-14;5!DOID:423;4.39e-14;5!DOID:0080000;4.39e-14;5!DOID:11722;4.39e-14;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.84e-14,5;DOID:450,3.84e-14,5;DOID:66,3.84e-14,5;DOID:423,3.84e-14,5;DOID:0080000,3.84e-14,5;DOID:11722,3.84e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!6.35e-21!95;UBERON:0002097!7.22e-13!40;UBERON:0002199!2.69e-12!45;UBERON:0002416!2.69e-12!45;UBERON:0001758!5.38e-08!6;UBERON:0003672!5.38e-08!6;UBERON:0000475!2.72e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;6.09e-12;41!UBERON:0002199;1.85e-10;46!UBERON:0002416;1.85e-10;46!UBERON:0003102;3.71e-08;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.88e-14,41;UBERON:0002199,1.06e-12,46;UBERON:0002416,1.06e-12,46;UBERON:0003102,8.98e-08,99 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0.298897361103602,0.117434498643765,0,0.140450806702248,0,0.245668634623536,0.309977343527296,3.56400857184616,0.741800787835671,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0.438977620880838,0,0.150238058906597,0.113432183160021,1.25572744982203,0.85422955527427,0.211931901159562,1.80054657650641,0.412210116953756,0.772921620136887,0.18611685633159,1.18143432568886,1.94874010322397,2.27190396819703,0.460249493211497,0,1.06502877754984,0.403008392910561,0.508681776931463,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797814349754612,0,0,0,0,1.14382394926518,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0,0.415941723061614,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0.280660094433074,0.128139149255701,0,0,0,0.308419387605311,0,0,0,0,0,0,0,0.574072240823034,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0.165018999841176,0.574265537996172,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,0.987884678879706,0,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.193978032976839,0.706049013532002,0,0,0,0,0,0,0,0,0,6.41404938529128,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0.276697269872462,0,0,0,0,0,0,0,0.467426619694449,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40376993627955,2.02049693259551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0.352675943690684,1.531227386766,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0.207216164163037,0.85359238546975,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0.33883824611688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:138450850..138450867,- | |||
}} |
Revision as of 02:26, 13 September 2013
Short description: | p@chr4:138450850..138450867, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:138450850..138450867, - |
Coexpression cluster: | C4371_Fibroblast_gastric_normal_Mesenchymal_Nucleus_Preadipocyte_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.68e-25 | 23 |
fibroblast | 2.92e-10 | 76 |
hepatic stem cell | 1.86e-09 | 2 |
hepatic mesenchymal stem cell | 1.86e-09 | 2 |
mesenchymal stem cell of adipose | 2.45e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
skin of body | 2.88e-14 | 41 |
integument | 1.06e-12 | 46 |
integumental system | 1.06e-12 | 46 |
surface structure | 8.98e-08 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.84e-14 | 5 |
myotonic disease | 3.84e-14 | 5 |
muscle tissue disease | 3.84e-14 | 5 |
myopathy | 3.84e-14 | 5 |
muscular disease | 3.84e-14 | 5 |
myotonic dystrophy | 3.84e-14 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.