FFCP PHASE1:Hg19::chr4:159092554..159092575,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=29bp_to_ENST00000505532_5end|coexpression_cluster_id=C564|description=CAGE_peak_2_at_ENST00000505532_5end|id=chr4:159092554..159092575,+|ontology_enrichment_celltype=CL:0002076!1.90e-10!43;CL:0000223!6.71e-08!59;CL:0002251!2.12e-07!21|ontology_enrichment_celltype_v019=CL:0002076;2.57e-14;42!CL:0000622;9.84e-13;5!CL:0002251;1.53e-12;20!CL:0002159;6.83e-11;14!CL:0000154;1.55e-10;6!CL:0000244;3.36e-10;4!CL:0000731;3.36e-10;4!CL:0002623;2.58e-08;3!CL:0002504;9.20e-08;3!CL:1000279;9.20e-08;3!CL:1000280;9.20e-08;3!CL:0000150;7.21e-07;9!CL:0002368;9.70e-07;13|ontology_enrichment_celltype_v019_2=CL:0002076,9.06e-17,42;CL:0000622,3.94e-13,5;CL:0002251,1.81e-12,20;CL:0000223,4.42e-12,58;CL:0002159,4.86e-11,14;CL:0000154,7.32e-11,6;CL:0000244,2.49e-10,4;CL:0000731,2.49e-10,4;CL:0000066,1.34e-09,253;CL:0002623,1.94e-08,3;CL:0002321,6.43e-08,250;CL:0002504,1.14e-07,3;CL:1000279,1.14e-07,3;CL:1000280,1.14e-07,3;CL:0000150,4.47e-07,9;CL:0002368,7.52e-07,13|ontology_enrichment_development_v019=CL:0000223;5.42e-07;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!2.37e-13!659;UBERON:0000467!6.50e-13!625;UBERON:0000480!9.06e-13!626;UBERON:0002050!1.07e-09!605;UBERON:0005423!1.07e-09!605;UBERON:0000923!1.86e-09!604;UBERON:0005291!1.86e-09!604;UBERON:0006598!1.86e-09!604;UBERON:0002532!1.86e-09!604;UBERON:0000922!1.95e-09!612;UBERON:0000926!4.49e-09!448;UBERON:0004120!4.49e-09!448;UBERON:0006603!4.49e-09!448;UBERON:0000161!1.76e-07!35;UBERON:0004923!4.72e-07!57;UBERON:0005631!9.21e-07!14;UBERON:0000158!9.21e-07!14|ontology_enrichment_uberon_v019=UBERON:0000365;4.08e-12;5!UBERON:0005910;4.98e-10;6!UBERON:0000486;7.77e-09;12!UBERON:0000077;9.37e-07;27|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.34e-12,5;UBERON:0005910,3.16e-10,6;UBERON:0004119,6.02e-10,160;UBERON:0000925,6.02e-10,160;UBERON:0006595,6.02e-10,160;UBERON:0006554,6.31e-09,47;UBERON:0001008,1.16e-08,48;UBERON:0000161,1.50e-08,36;UBERON:0003102,3.91e-08,99;UBERON:0004923,4.42e-08,66;UBERON:0005631,2.22e-07,14;UBERON:0000158,2.22e-07,14|phase1_expression=0.363356758541113,0.214100523890983,1.12763523276777,0,0.446961094427288,1.74467704820074,0,0.631719873426831,0.783556884599516,0.245733936501509,0,1.74753097704138,2.11013582582763,0.247532705920093,0,0,1.20538905604795,0.730310090387373,0.975865597581014,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0.309632246632152,0.919421224478927,0.30120591877825,1.84877005083394,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0,0.242584061187816,0,0.822335776043652,1.23882548358041,0.863077176966451,0.768482119587302,0.945928919554341,0,0,0,0.376484679085209,0,0.449446968890169,0.306083892370903,0.320929027076094,0.639337125799041,0,0.398927315243264,0,0.870627715885752,0.56738522469114,0,0.251248665256743,0,0,0,0.368277635987565,0.949387162322653,0.422510572623884,0.212604299965044,0.209658645508376,0.336985893439485,0.150176892841506,0.32145117339416,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0.795285947051099,0,0,0.443458794925128,0.263504357079378,0,3.27865759463288,2.59549109949101,0.97364218096405,0.174129737299267,0.398873881556595,0.238490624305342,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0,0.626984899610432,1.03366703667732,0.35576626268671,1.33888245105868,0.805658634218294,0,0.488124115096339,0,3.24056779152704,0.357198913136319,0,0.337834441449967,0,0.949265659568129,0.366403487860815,0,0,1.3082821564276,0.496971951695318,0,1.85372853138506,2.0078563452417,0.709336764396714,0,0,0,0.311211035399766,0,0,0,0,0,0.312160076830321,1.1409436430889,0,0,0,0,0.408308342509787,0,0.103325781175765,0,0,1.82032272387605,0,0,0,0.277064115484183,0,0,0,0.453728732640084,0,0,0,0.300091096084402,0.618315175430633,0.772921620136887,0.37223371266318,0,0.0974370051611986,0,0.368199594569197,0.161646056818812,0,0,0,0.773043412653187,1.36373060295417,1.14721838155602,0,0,0,0,0,0,0,0,0,0,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,1.10689594688802,0,6.14601598288303,0,0.301586917234893,3.24059558054854,0,0,0,0,0.469634776943287,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0,0.702012795417713,0.148631162288728,0.93733833986777,9.07103492273841,3.54437743105966,3.67189943081678,7.84711633987697,0.766765358330422,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,1.42198887333556,0,0,0.531876233169741,2.08014873822732,0,1.41849132023278,0,0.428933980974443,0,0.823240336780769,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0.184369168541703,1.47702144595741,0,0.343143423810856,0.206768026122887,0,0,0.909382714338778,3.32870879020994,1.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=29bp_to_ENST00000505532_5end | |||
|coexpression_cluster_id=C564 | |||
|description=CAGE_peak_2_at_ENST00000505532_5end | |||
|id=chr4:159092554..159092575,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.90e-10!43;CL:0000223!6.71e-08!59;CL:0002251!2.12e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.57e-14;42!CL:0000622;9.84e-13;5!CL:0002251;1.53e-12;20!CL:0002159;6.83e-11;14!CL:0000154;1.55e-10;6!CL:0000244;3.36e-10;4!CL:0000731;3.36e-10;4!CL:0002623;2.58e-08;3!CL:0002504;9.20e-08;3!CL:1000279;9.20e-08;3!CL:1000280;9.20e-08;3!CL:0000150;7.21e-07;9!CL:0002368;9.70e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,9.06e-17,42;CL:0000622,3.94e-13,5;CL:0002251,1.81e-12,20;CL:0000223,4.42e-12,58;CL:0002159,4.86e-11,14;CL:0000154,7.32e-11,6;CL:0000244,2.49e-10,4;CL:0000731,2.49e-10,4;CL:0000066,1.34e-09,253;CL:0002623,1.94e-08,3;CL:0002321,6.43e-08,250;CL:0002504,1.14e-07,3;CL:1000279,1.14e-07,3;CL:1000280,1.14e-07,3;CL:0000150,4.47e-07,9;CL:0002368,7.52e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000223;5.42e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.37e-13!659;UBERON:0000467!6.50e-13!625;UBERON:0000480!9.06e-13!626;UBERON:0002050!1.07e-09!605;UBERON:0005423!1.07e-09!605;UBERON:0000923!1.86e-09!604;UBERON:0005291!1.86e-09!604;UBERON:0006598!1.86e-09!604;UBERON:0002532!1.86e-09!604;UBERON:0000922!1.95e-09!612;UBERON:0000926!4.49e-09!448;UBERON:0004120!4.49e-09!448;UBERON:0006603!4.49e-09!448;UBERON:0000161!1.76e-07!35;UBERON:0004923!4.72e-07!57;UBERON:0005631!9.21e-07!14;UBERON:0000158!9.21e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;4.08e-12;5!UBERON:0005910;4.98e-10;6!UBERON:0000486;7.77e-09;12!UBERON:0000077;9.37e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.34e-12,5;UBERON:0005910,3.16e-10,6;UBERON:0004119,6.02e-10,160;UBERON:0000925,6.02e-10,160;UBERON:0006595,6.02e-10,160;UBERON:0006554,6.31e-09,47;UBERON:0001008,1.16e-08,48;UBERON:0000161,1.50e-08,36;UBERON:0003102,3.91e-08,99;UBERON:0004923,4.42e-08,66;UBERON:0005631,2.22e-07,14;UBERON:0000158,2.22e-07,14 | |||
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| |||
|short_description=p2@ENST00000505532 | |||
}} |
Revision as of 03:02, 13 September 2013
Short description: | p2@ENST00000505532 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENST00000505532_5end |
Coexpression cluster: | C564_Small_salivary_Corneal_Bronchial_Urothelial_Keratinocyte_Tracheal |
Association with transcript: | 29bp_to_ENST00000505532_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 9.06e-17 | 42 |
acinar cell | 3.94e-13 | 5 |
epithelial cell of alimentary canal | 1.81e-12 | 20 |
endodermal cell | 4.42e-12 | 58 |
general ecto-epithelial cell | 4.86e-11 | 14 |
protein secreting cell | 7.32e-11 | 6 |
transitional epithelial cell | 2.49e-10 | 4 |
urothelial cell | 2.49e-10 | 4 |
epithelial cell | 1.34e-09 | 253 |
acinar cell of salivary gland | 1.94e-08 | 3 |
embryonic cell | 6.43e-08 | 250 |
enteric smooth muscle cell | 1.14e-07 | 3 |
smooth muscle cell of large intestine | 1.14e-07 | 3 |
smooth muscle cell of colon | 1.14e-07 | 3 |
glandular epithelial cell | 4.47e-07 | 9 |
respiratory epithelial cell | 7.52e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
urothelium | 2.34e-12 | 5 |
transitional epithelium | 3.16e-10 | 6 |
endoderm-derived structure | 6.02e-10 | 160 |
endoderm | 6.02e-10 | 160 |
presumptive endoderm | 6.02e-10 | 160 |
urinary system structure | 6.31e-09 | 47 |
renal system | 1.16e-08 | 48 |
orifice | 1.50e-08 | 36 |
surface structure | 3.91e-08 | 99 |
organ component layer | 4.42e-08 | 66 |
extraembryonic membrane | 2.22e-07 | 14 |
membranous layer | 2.22e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.