FFCP PHASE1:Hg19::chr4:166794383..166794399,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7092|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11843|TSSclassifier=S|UniProt=O43897,B7ZLW3|association_with_transcript=-10bp_to_ENST00000061240,NM_001204760,NM_012464,uc003irh.1,uc011cjn.1,uc011cjo.1_5end|description=CAGE_peak_1_at_TLL1_5end|id=chr4:166794383..166794399,+|ontology_enrichment_celltype=CL:0002139!1.29e-10!24;CL:0000071!1.45e-08!18;CL:0002546!1.45e-08!18;CL:0000213!2.14e-07!57;CL:0000215!2.14e-07!57;CL:0000115!8.69e-07!35|ontology_enrichment_celltype_v019=CL:0002623;3.88e-07;3|ontology_enrichment_celltype_v019_2=CL:0002623,3.19e-07,3|ontology_enrichment_development_v019=UBERON:0008947;8.69e-11;29!UBERON:0006215;4.17e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.35e-27!115;UBERON:0000477!3.03e-19!286;UBERON:0002346!1.39e-14!90;UBERON:0000481!1.98e-14!347;UBERON:0004111!4.35e-13!241;UBERON:0000483!6.80e-13!309;UBERON:0000119!2.07e-12!312;UBERON:0003075!3.79e-12!86;UBERON:0007284!3.79e-12!86;UBERON:0000064!5.28e-12!219;UBERON:0001049!1.80e-11!57;UBERON:0005068!1.80e-11!57;UBERON:0006241!1.80e-11!57;UBERON:0007135!1.80e-11!57;UBERON:0000468!8.57e-11!659;UBERON:0000924!3.57e-10!173;UBERON:0006601!3.57e-10!173;UBERON:0000153!3.64e-10!129;UBERON:0007811!3.64e-10!129;UBERON:0002616!6.84e-10!59;UBERON:0001737!9.02e-10!9;UBERON:0000033!1.80e-09!123;UBERON:0000922!2.68e-09!612;UBERON:0000467!8.42e-09!625;UBERON:0005743!8.51e-09!86;UBERON:0000025!1.02e-08!194;UBERON:0000480!1.08e-08!626;UBERON:0002050!1.30e-08!605;UBERON:0005423!1.30e-08!605;UBERON:0001986!1.45e-08!18;UBERON:0004638!1.45e-08!18;UBERON:0004852!1.45e-08!18;UBERON:0004121!1.62e-08!169;UBERON:0001017!1.66e-08!82;UBERON:0000955!1.97e-08!69;UBERON:0006238!1.97e-08!69;UBERON:0000073!2.58e-08!94;UBERON:0001016!2.58e-08!94;UBERON:0000923!2.73e-08!604;UBERON:0005291!2.73e-08!604;UBERON:0006598!2.73e-08!604;UBERON:0002532!2.73e-08!604;UBERON:0003080!3.51e-08!42;UBERON:0001557!4.26e-08!19;UBERON:0000063!5.64e-08!97;UBERON:0003056!6.85e-08!61;UBERON:0002780!1.35e-07!41;UBERON:0001890!1.35e-07!41;UBERON:0006240!1.35e-07!41;UBERON:0003103!1.64e-07!69;UBERON:0006914!3.72e-07!25;UBERON:0002020!5.22e-07!34;UBERON:0003528!5.22e-07!34;UBERON:0000487!7.24e-07!22;UBERON:0000062!7.40e-07!511|ontology_enrichment_uberon_v019=UBERON:0001737;1.85e-18;9!UBERON:0001557;1.85e-18;9!UBERON:0002050;1.22e-10;5!UBERON:0005423;1.22e-10;5!UBERON:0002346;2.46e-09;4!UBERON:0000923;2.46e-09;4!UBERON:0010316;2.46e-09;4!UBERON:0005291;2.46e-09;4!UBERON:0000059;3.03e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.13e-18,9;UBERON:0007023,3.68e-16,114;UBERON:0001557,4.43e-09,19;UBERON:0001007,6.28e-09,145;UBERON:0001555,6.28e-09,145;UBERON:0007026,6.28e-09,145;UBERON:0004921,6.79e-09,118;UBERON:0004119,7.66e-08,160;UBERON:0000925,7.66e-08,160;UBERON:0006595,7.66e-08,160;UBERON:0008947,1.90e-07,38;UBERON:0003258,1.90e-07,38;UBERON:0000059,2.78e-07,11;UBERON:0000160,9.63e-07,17|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.144846518960824,0.795285947051099,0.486634870302636,0.472674085820339,0.443458794925128,0.351339142772504,0.72038491523742,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0.419499436209906,5.22724279686128,0.417989933073621,6.46041897923322,3.91342888955381,2.34304428935269,0.402829317109147,0.760272105718513,0.732186172644509,0.735326160691737,7.29127753093584,1.3394959242612,2.91888184414021,2.59006405111641,1.53316637465883,0.949265659568129,0.549605231791222,0,0,0,0,0,0,0,0,2.24271040056923,0,0.24666754841716,0.311211035399766,0.404132016209064,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0.907457465280168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0.386521706326594,0,0.286804595389004,0,0,0,0.10366105501537,0.252320850875628,0,0,0.643240938192885,0,0.464367928031979,0,4.49565840151407,5.56329477257736,5.06123162755312,5.07352274569012,3.92182999366331,4.27087114399974,5.79774625088707,4.12065076763227,3.07797725557112,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0.658501712451753,0,0.402115889646523,0,0,0,0,0.34779121492523,0.469634776943287,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,1.34385702559088,0.425325291727159,1.43293636324557,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0.531876233169741,0,0,0,0,0,0,0,0.977208552881205,0,0,0.301439377059586,1.74306691720059,2.39935178836937,0,0,0,0,0,0,0.723906533337896,1.43833425785268,0.716243852959582,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0.271265023699736,0.415941723061614,0,0.6308096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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7092 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11843 | |||
|TSSclassifier=S | |||
|UniProt=O43897,B7ZLW3 | |||
|association_with_transcript=-10bp_to_ENST00000061240,NM_001204760,NM_012464,uc003irh.1,uc011cjn.1,uc011cjo.1_5end | |||
|description=CAGE_peak_1_at_TLL1_5end | |||
|id=chr4:166794383..166794399,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.29e-10!24;CL:0000071!1.45e-08!18;CL:0002546!1.45e-08!18;CL:0000213!2.14e-07!57;CL:0000215!2.14e-07!57;CL:0000115!8.69e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0002623;3.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,3.19e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.69e-11;29!UBERON:0006215;4.17e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.35e-27!115;UBERON:0000477!3.03e-19!286;UBERON:0002346!1.39e-14!90;UBERON:0000481!1.98e-14!347;UBERON:0004111!4.35e-13!241;UBERON:0000483!6.80e-13!309;UBERON:0000119!2.07e-12!312;UBERON:0003075!3.79e-12!86;UBERON:0007284!3.79e-12!86;UBERON:0000064!5.28e-12!219;UBERON:0001049!1.80e-11!57;UBERON:0005068!1.80e-11!57;UBERON:0006241!1.80e-11!57;UBERON:0007135!1.80e-11!57;UBERON:0000468!8.57e-11!659;UBERON:0000924!3.57e-10!173;UBERON:0006601!3.57e-10!173;UBERON:0000153!3.64e-10!129;UBERON:0007811!3.64e-10!129;UBERON:0002616!6.84e-10!59;UBERON:0001737!9.02e-10!9;UBERON:0000033!1.80e-09!123;UBERON:0000922!2.68e-09!612;UBERON:0000467!8.42e-09!625;UBERON:0005743!8.51e-09!86;UBERON:0000025!1.02e-08!194;UBERON:0000480!1.08e-08!626;UBERON:0002050!1.30e-08!605;UBERON:0005423!1.30e-08!605;UBERON:0001986!1.45e-08!18;UBERON:0004638!1.45e-08!18;UBERON:0004852!1.45e-08!18;UBERON:0004121!1.62e-08!169;UBERON:0001017!1.66e-08!82;UBERON:0000955!1.97e-08!69;UBERON:0006238!1.97e-08!69;UBERON:0000073!2.58e-08!94;UBERON:0001016!2.58e-08!94;UBERON:0000923!2.73e-08!604;UBERON:0005291!2.73e-08!604;UBERON:0006598!2.73e-08!604;UBERON:0002532!2.73e-08!604;UBERON:0003080!3.51e-08!42;UBERON:0001557!4.26e-08!19;UBERON:0000063!5.64e-08!97;UBERON:0003056!6.85e-08!61;UBERON:0002780!1.35e-07!41;UBERON:0001890!1.35e-07!41;UBERON:0006240!1.35e-07!41;UBERON:0003103!1.64e-07!69;UBERON:0006914!3.72e-07!25;UBERON:0002020!5.22e-07!34;UBERON:0003528!5.22e-07!34;UBERON:0000487!7.24e-07!22;UBERON:0000062!7.40e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.85e-18;9!UBERON:0001557;1.85e-18;9!UBERON:0002050;1.22e-10;5!UBERON:0005423;1.22e-10;5!UBERON:0002346;2.46e-09;4!UBERON:0000923;2.46e-09;4!UBERON:0010316;2.46e-09;4!UBERON:0005291;2.46e-09;4!UBERON:0000059;3.03e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.13e-18,9;UBERON:0007023,3.68e-16,114;UBERON:0001557,4.43e-09,19;UBERON:0001007,6.28e-09,145;UBERON:0001555,6.28e-09,145;UBERON:0007026,6.28e-09,145;UBERON:0004921,6.79e-09,118;UBERON:0004119,7.66e-08,160;UBERON:0000925,7.66e-08,160;UBERON:0006595,7.66e-08,160;UBERON:0008947,1.90e-07,38;UBERON:0003258,1.90e-07,38;UBERON:0000059,2.78e-07,11;UBERON:0000160,9.63e-07,17 | |||
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| |||
|short_description=p1@TLL1 | |||
}} |
Revision as of 03:13, 13 September 2013
Short description: | p1@TLL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TLL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_ENST00000061240, NM_001204760, NM_012464, uc003irh.1, uc011cjn.1, uc011cjo.1_5end |
EntrezGene: | TLL1 |
HGNC: | 11843 |
UniProt: | O43897B7ZLW3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 3.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.13e-18 | 9 |
adult organism | 3.68e-16 | 114 |
upper respiratory tract | 4.43e-09 | 19 |
digestive system | 6.28e-09 | 145 |
digestive tract | 6.28e-09 | 145 |
primitive gut | 6.28e-09 | 145 |
subdivision of digestive tract | 6.79e-09 | 118 |
endoderm-derived structure | 7.66e-08 | 160 |
endoderm | 7.66e-08 | 160 |
presumptive endoderm | 7.66e-08 | 160 |
respiratory primordium | 1.90e-07 | 38 |
endoderm of foregut | 1.90e-07 | 38 |
large intestine | 2.78e-07 | 11 |
intestine | 9.63e-07 | 17 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.