FFCP PHASE1:Mm9::chr16:33799579..33799594,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:33799579..33799594,+|id=chr16:33799579..33799594,+|ontology_enrichment_celltype=CL:0002563!6.80e-14!9;CL:0002251!6.80e-14!9;CL:0000239!1.27e-12!6;CL:0000677!1.27e-12!6;CL:0000212!1.27e-12!6;CL:0000584!1.27e-12!6;CL:0000075!1.03e-10!7;CL:0000066!2.04e-08!25;CL:0000473!5.55e-08!3;CL:0000627!5.55e-08!3;CL:0000682!5.55e-08!3;CL:0002076!8.80e-08!15|ontology_enrichment_celltype_v019_2=CL:0000682,1.03e-15,3;CL:0000473,5.09e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!8.05e-34!43;UBERON:0000344!9.75e-27!15;UBERON:0005409!1.42e-26!59;UBERON:0001242!2.65e-22!13;UBERON:0000060!2.65e-22!13;UBERON:0001262!2.65e-22!13;UBERON:0004786!2.65e-22!13;UBERON:0004923!2.11e-15!24;UBERON:0003350!6.80e-14!9;UBERON:0004808!6.80e-14!9;UBERON:0001277!6.80e-14!9;UBERON:0000485!4.11e-11!11;UBERON:0001007!2.36e-10!128;UBERON:0001555!2.36e-10!128;UBERON:0007026!2.36e-10!128;UBERON:0004119!4.45e-10!130;UBERON:0000925!4.45e-10!130;UBERON:0006595!4.45e-10!130;UBERON:0004921!1.21e-08!126;UBERON:0004185!1.21e-08!126;UBERON:0000331!7.19e-08!3;UBERON:0002116!7.19e-08!3;UBERON:0001204!7.19e-08!3;UBERON:0001168!7.19e-08!3|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.94e-25,31;UBERON:0000344,1.36e-20,15;UBERON:0002108,7.53e-20,4;UBERON:0005409,9.63e-16,47;UBERON:0000331,1.82e-15,3;UBERON:0002116,1.82e-15,3;UBERON:0001204,1.82e-15,3;UBERON:0001168,1.82e-15,3;UBERON:0001242,1.91e-13,13;UBERON:0001262,1.91e-13,13;UBERON:0004786,1.91e-13,13;UBERON:0004923,1.60e-12,24;UBERON:0001962,2.19e-11,2;UBERON:0001961,2.19e-11,2;UBERON:0001744,2.19e-11,2;UBERON:0001155,1.70e-10,2;UBERON:0000059,1.70e-10,2;UBERON:0002465,7.17e-08,3;UBERON:0001007,2.10e-07,116;UBERON:0001555,2.10e-07,116;UBERON:0007026,2.10e-07,116;UBERON:0004119,3.07e-07,118;UBERON:0000925,3.07e-07,118;UBERON:0006595,3.07e-07,118|phase1_expression=0,0.348975407639361,0.454999239389536,1.81478526784098,0.500895729946347,0.503637815735669,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03985603307473,2.75291137280604,1.72269589234506,2.15380998079537,2.15471232685889,5.70070258369122,1.51218077855958,1.33038306393183,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96502539580558,1.32225283331772,0,0,0.257734922644187,0.403367049246685,0.444756087689741,0.380451252225118,1.89811624617805,0.988193728344065,0,0.994782360205754,0.19496408711912,3.59527763461689,1.29682829924817,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0,0,0.90730481304255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0.263069711437843,0.135804113845862,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr16:33799579..33799594,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:33799579..33799594,+ | |||
|id=chr16:33799579..33799594,+ | |||
|ontology_enrichment_celltype=CL:0002563!6.80e-14!9;CL:0002251!6.80e-14!9;CL:0000239!1.27e-12!6;CL:0000677!1.27e-12!6;CL:0000212!1.27e-12!6;CL:0000584!1.27e-12!6;CL:0000075!1.03e-10!7;CL:0000066!2.04e-08!25;CL:0000473!5.55e-08!3;CL:0000627!5.55e-08!3;CL:0000682!5.55e-08!3;CL:0002076!8.80e-08!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.03e-15,3;CL:0000473,5.09e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.05e-34!43;UBERON:0000344!9.75e-27!15;UBERON:0005409!1.42e-26!59;UBERON:0001242!2.65e-22!13;UBERON:0000060!2.65e-22!13;UBERON:0001262!2.65e-22!13;UBERON:0004786!2.65e-22!13;UBERON:0004923!2.11e-15!24;UBERON:0003350!6.80e-14!9;UBERON:0004808!6.80e-14!9;UBERON:0001277!6.80e-14!9;UBERON:0000485!4.11e-11!11;UBERON:0001007!2.36e-10!128;UBERON:0001555!2.36e-10!128;UBERON:0007026!2.36e-10!128;UBERON:0004119!4.45e-10!130;UBERON:0000925!4.45e-10!130;UBERON:0006595!4.45e-10!130;UBERON:0004921!1.21e-08!126;UBERON:0004185!1.21e-08!126;UBERON:0000331!7.19e-08!3;UBERON:0002116!7.19e-08!3;UBERON:0001204!7.19e-08!3;UBERON:0001168!7.19e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.94e-25,31;UBERON:0000344,1.36e-20,15;UBERON:0002108,7.53e-20,4;UBERON:0005409,9.63e-16,47;UBERON:0000331,1.82e-15,3;UBERON:0002116,1.82e-15,3;UBERON:0001204,1.82e-15,3;UBERON:0001168,1.82e-15,3;UBERON:0001242,1.91e-13,13;UBERON:0001262,1.91e-13,13;UBERON:0004786,1.91e-13,13;UBERON:0004923,1.60e-12,24;UBERON:0001962,2.19e-11,2;UBERON:0001961,2.19e-11,2;UBERON:0001744,2.19e-11,2;UBERON:0001155,1.70e-10,2;UBERON:0000059,1.70e-10,2;UBERON:0002465,7.17e-08,3;UBERON:0001007,2.10e-07,116;UBERON:0001555,2.10e-07,116;UBERON:0007026,2.10e-07,116;UBERON:0004119,3.07e-07,118;UBERON:0000925,3.07e-07,118;UBERON:0006595,3.07e-07,118 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,1.81478526784098,0.500895729946347,0.503637815735669,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03985603307473,2.75291137280604,1.72269589234506,2.15380998079537,2.15471232685889,5.70070258369122,1.51218077855958,1.33038306393183,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96502539580558,1.32225283331772,0,0,0.257734922644187,0.403367049246685,0.444756087689741,0.380451252225118,1.89811624617805,0.988193728344065,0,0.994782360205754,0.19496408711912,3.59527763461689,1.29682829924817,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0,0,0.90730481304255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0.263069711437843,0.135804113845862,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:33799579..33799594,+ | |||
}} |
Revision as of 12:29, 13 September 2013
Short description: | p@chr16:33799579..33799594, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:33799579..33799594, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.03e-15 | 3 |
defensive cell | 5.09e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.94e-25 | 31 |
mucosa | 1.36e-20 | 15 |
small intestine | 7.53e-20 | 4 |
gastrointestinal system | 9.63e-16 | 47 |
ileal mucosa | 1.82e-15 | 3 |
ileum | 1.82e-15 | 3 |
mucosa of small intestine | 1.82e-15 | 3 |
wall of small intestine | 1.82e-15 | 3 |
intestinal mucosa | 1.91e-13 | 13 |
wall of intestine | 1.91e-13 | 13 |
gastrointestinal system mucosa | 1.91e-13 | 13 |
organ component layer | 1.60e-12 | 24 |
gut-associated lymphoid tissue | 2.19e-11 | 2 |
mucosa-associated lymphoid tissue | 2.19e-11 | 2 |
lymphoid tissue | 2.19e-11 | 2 |
colon | 1.70e-10 | 2 |
large intestine | 1.70e-10 | 2 |
lymphoid system | 7.17e-08 | 3 |
digestive system | 2.10e-07 | 116 |
digestive tract | 2.10e-07 | 116 |
primitive gut | 2.10e-07 | 116 |
endoderm-derived structure | 3.07e-07 | 118 |
endoderm | 3.07e-07 | 118 |
presumptive endoderm | 3.07e-07 | 118 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.