FFCP PHASE1:Hg19::chr5:10308113..10308120,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=134147|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25090|TSSclassifier=S|UniProt=Q96DG6|association_with_transcript=17bp_to_ENST00000296658_5end|description=CAGE_peak_10_at_CMBL_5end|id=chr5:10308113..10308120,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050687!6.60e-16!143;DOID:305!2.11e-11!106;DOID:162!1.73e-10!235;DOID:14566!1.77e-10!239|ontology_enrichment_disease_v019=DOID:0050619;2.07e-10;1!DOID:1357;2.07e-10;1|ontology_enrichment_disease_v019_2=DOID:0050619,9.84e-11,1;DOID:1357,9.84e-11,1|ontology_enrichment_uberon=UBERON:0001017!1.36e-11!82;UBERON:0000955!1.78e-11!69;UBERON:0006238!1.78e-11!69;UBERON:0005743!2.13e-11!86;UBERON:0000073!3.29e-11!94;UBERON:0001016!3.29e-11!94;UBERON:0001049!4.85e-11!57;UBERON:0005068!4.85e-11!57;UBERON:0006241!4.85e-11!57;UBERON:0007135!4.85e-11!57;UBERON:0000475!8.29e-11!365;UBERON:0000481!1.39e-10!347;UBERON:0002616!1.77e-10!59;UBERON:0002346!4.64e-10!90;UBERON:0000924!3.24e-09!173;UBERON:0006601!3.24e-09!173;UBERON:0000033!5.13e-09!123;UBERON:0002780!7.00e-09!41;UBERON:0001890!7.00e-09!41;UBERON:0006240!7.00e-09!41;UBERON:0003075!1.22e-08!86;UBERON:0007284!1.22e-08!86;UBERON:0000477!1.68e-08!286;UBERON:0003080!1.89e-08!42;UBERON:0000064!2.24e-08!219;UBERON:0002020!2.82e-08!34;UBERON:0003528!2.82e-08!34;UBERON:0001869!3.20e-08!32;UBERON:0000153!3.42e-08!129;UBERON:0007811!3.42e-08!129;UBERON:0004121!4.33e-08!169;UBERON:0001893!6.59e-08!34;UBERON:0002791!1.23e-07!33;UBERON:0000062!1.93e-07!511;UBERON:0003056!4.93e-07!61|ontology_enrichment_uberon_v019=UBERON:0005383;4.83e-13;3!UBERON:0005382;4.83e-13;3!UBERON:0001874;2.07e-10;1!UBERON:0001764;2.07e-10;1!UBERON:0001825;2.07e-10;1!UBERON:0000369;5.20e-10;4!UBERON:0002435;5.20e-10;4!UBERON:0000204;5.20e-10;4!UBERON:0002420;1.25e-09;9!UBERON:0007245;1.25e-09;9!UBERON:0010009;1.25e-09;9!UBERON:0010011;1.25e-09;9!UBERON:0000454;1.25e-09;9|ontology_enrichment_uberon_v019_2=UBERON:0005383,3.36e-13,3;UBERON:0005382,3.36e-13,3;UBERON:0001764,9.84e-11,1;UBERON:0001825,9.84e-11,1;UBERON:0001874,2.28e-10,1;UBERON:0000369,3.97e-10,4;UBERON:0002435,3.97e-10,4;UBERON:0000204,3.97e-10,4;UBERON:0010082,3.97e-10,4;UBERON:0002420,8.00e-10,9;UBERON:0007245,8.00e-10,9;UBERON:0010009,8.00e-10,9;UBERON:0010011,8.00e-10,9;UBERON:0000454,8.00e-10,9|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0.218441372130172,0,0.247532705920093,0,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.488124115096339,0,0,0.17859945656816,0.44905874525234,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0.624320153660641,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.473227200159376,0.168584690078102,0.723033089650446,0.661763836394364,0.217879444092406,0.71181185733329,0.943819157121151,1.17732879075208,0,0,0,0,0,1.26755034821831,0,0,0,0,0.171567810298526,0,0,0,0.277765335475589,0,0,0,0.463721619900307,0.234817388471643,0.433099343283221,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0.571652865261156,0.112131084345361,0,0.07333828582095,0,0,0,0.797814349754612,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0.355391948742546,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0.24538298343828,0,0,0,0.356857977594324,0.157702415033935,0,0.300946099727719,0,0,0.664225598535437,0,0.0868836144680828,0.979005787313703,2.05886054286514,0,0,0,0,0,0,0,0,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0,0.362578348774867,0,0.276242966807689,0,0,0.524497659837696,0,0.385076685522074,0,0,0.105551628892876,0,0,0,0,0.541892875087706,0.501689773854853,0.254876273045038,0.831076008928724,0.671624264166535,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0.154048617114644,0,0,0.214840489736547,0,0.0852266274161009,0.0890320356467374,0,0.192190067365106,0,0.30347334256665,0.464845549297286,0,0.6970372701606,0,0,0,0.37064843820784,0,0,0.316379424718726,0.190630193923825,0,0.855877976067841,0,0,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0.421258456238981,0,0,0,0.272999822815972,0,0,0,0.66343897524122,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=134147 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25090 | |||
|TSSclassifier=S | |||
|UniProt=Q96DG6 | |||
|association_with_transcript=17bp_to_ENST00000296658_5end | |||
|description=CAGE_peak_10_at_CMBL_5end | |||
|id=chr5:10308113..10308120,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!6.60e-16!143;DOID:305!2.11e-11!106;DOID:162!1.73e-10!235;DOID:14566!1.77e-10!239 | |||
|ontology_enrichment_disease_v019=DOID:0050619;2.07e-10;1!DOID:1357;2.07e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,9.84e-11,1;DOID:1357,9.84e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.36e-11!82;UBERON:0000955!1.78e-11!69;UBERON:0006238!1.78e-11!69;UBERON:0005743!2.13e-11!86;UBERON:0000073!3.29e-11!94;UBERON:0001016!3.29e-11!94;UBERON:0001049!4.85e-11!57;UBERON:0005068!4.85e-11!57;UBERON:0006241!4.85e-11!57;UBERON:0007135!4.85e-11!57;UBERON:0000475!8.29e-11!365;UBERON:0000481!1.39e-10!347;UBERON:0002616!1.77e-10!59;UBERON:0002346!4.64e-10!90;UBERON:0000924!3.24e-09!173;UBERON:0006601!3.24e-09!173;UBERON:0000033!5.13e-09!123;UBERON:0002780!7.00e-09!41;UBERON:0001890!7.00e-09!41;UBERON:0006240!7.00e-09!41;UBERON:0003075!1.22e-08!86;UBERON:0007284!1.22e-08!86;UBERON:0000477!1.68e-08!286;UBERON:0003080!1.89e-08!42;UBERON:0000064!2.24e-08!219;UBERON:0002020!2.82e-08!34;UBERON:0003528!2.82e-08!34;UBERON:0001869!3.20e-08!32;UBERON:0000153!3.42e-08!129;UBERON:0007811!3.42e-08!129;UBERON:0004121!4.33e-08!169;UBERON:0001893!6.59e-08!34;UBERON:0002791!1.23e-07!33;UBERON:0000062!1.93e-07!511;UBERON:0003056!4.93e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0005383;4.83e-13;3!UBERON:0005382;4.83e-13;3!UBERON:0001874;2.07e-10;1!UBERON:0001764;2.07e-10;1!UBERON:0001825;2.07e-10;1!UBERON:0000369;5.20e-10;4!UBERON:0002435;5.20e-10;4!UBERON:0000204;5.20e-10;4!UBERON:0002420;1.25e-09;9!UBERON:0007245;1.25e-09;9!UBERON:0010009;1.25e-09;9!UBERON:0010011;1.25e-09;9!UBERON:0000454;1.25e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,3.36e-13,3;UBERON:0005382,3.36e-13,3;UBERON:0001764,9.84e-11,1;UBERON:0001825,9.84e-11,1;UBERON:0001874,2.28e-10,1;UBERON:0000369,3.97e-10,4;UBERON:0002435,3.97e-10,4;UBERON:0000204,3.97e-10,4;UBERON:0010082,3.97e-10,4;UBERON:0002420,8.00e-10,9;UBERON:0007245,8.00e-10,9;UBERON:0010009,8.00e-10,9;UBERON:0010011,8.00e-10,9;UBERON:0000454,8.00e-10,9 | |||
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| |||
|short_description=p10@CMBL | |||
}} |
Revision as of 12:30, 13 September 2013
Short description: | p10@CMBL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_CMBL_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_ENST00000296658_5end |
EntrezGene: | CMBL |
HGNC: | 25090 |
UniProt: | Q96DG6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
caudate-putamen | 3.36e-13 | 3 |
dorsal striatum | 3.36e-13 | 3 |
maxillary sinus | 9.84e-11 | 1 |
paranasal sinus | 9.84e-11 | 1 |
putamen | 2.28e-10 | 1 |
corpus striatum | 3.97e-10 | 4 |
striatum | 3.97e-10 | 4 |
ventral part of telencephalon | 3.97e-10 | 4 |
future corpus striatum | 3.97e-10 | 4 |
basal ganglion | 8.00e-10 | 9 |
nuclear complex of neuraxis | 8.00e-10 | 9 |
aggregate regional part of brain | 8.00e-10 | 9 |
collection of basal ganglia | 8.00e-10 | 9 |
cerebral subcortex | 8.00e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 9.84e-11 | 1 |
maxillary sinus cancer | 9.84e-11 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.