FFCP PHASE1:Mm9::chr16:8792459..8792470,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=252870|HGNC=|MCL_coexpression_id=834|UniProt=E9PXY8|association_with_transcript=-58bp_to_ENSMUST00000160405,uc007ycz.1_5end|description=CAGE_peak_11_at_Usp7_5end|id=chr16:8792459..8792470,-|ontology_enrichment_celltype=CL:0000349!1.95e-10!3;CL:0000351!1.95e-10!3|ontology_enrichment_celltype_v019_2=CL:0000349,7.38e-28,3;CL:0000351,7.38e-28,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!2.37e-33!18;UBERON:0005564!2.37e-33!18;UBERON:0003133!7.04e-32!24;UBERON:0004176!5.53e-31!17;UBERON:0009196!5.53e-31!17;UBERON:0009117!5.53e-31!17;UBERON:0005156!3.89e-29!26;UBERON:0000990!3.89e-29!26;UBERON:0000473!9.71e-24!14;UBERON:0003135!5.25e-22!15;UBERON:0003101!1.72e-20!16;UBERON:0000079!1.72e-20!16;UBERON:0002323!1.04e-16!37;UBERON:0004458!1.04e-16!37;UBERON:0003886!3.53e-16!38;UBERON:0002553!1.13e-15!39;UBERON:0000358!1.95e-10!3;UBERON:0000307!1.95e-10!3;UBERON:0005631!1.21e-09!3;UBERON:0000478!1.21e-09!3;UBERON:0000158!1.21e-09!3;UBERON:0000464!1.25e-09!57;UBERON:0000466!5.26e-09!79;UBERON:0003134!6.31e-09!8;UBERON:0000992!7.43e-09!3;UBERON:0000474!6.75e-08!9;UBERON:0001987!2.94e-07!2;UBERON:0003124!2.94e-07!2;UBERON:0004340!2.94e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0000358,7.38e-28,3;UBERON:0000307,7.38e-28,3;UBERON:0007010,7.38e-28,3;UBERON:0001987,1.94e-18,2;UBERON:0003124,1.94e-18,2;UBERON:0004340,1.94e-18,2;UBERON:0003133,2.01e-17,24;UBERON:0005156,4.55e-16,26;UBERON:0000990,4.55e-16,26;UBERON:0000473,1.62e-15,14;UBERON:0003135,1.71e-14,15;UBERON:0003101,1.34e-13,16;UBERON:0000079,1.34e-13,16;UBERON:0004176,8.30e-13,17;UBERON:0009196,8.30e-13,17;UBERON:0009117,8.30e-13,17;UBERON:0005631,1.24e-12,3;UBERON:0000478,1.24e-12,3;UBERON:0000158,1.24e-12,3;UBERON:0000991,4.20e-12,18;UBERON:0005564,4.20e-12,18;UBERON:0005795,1.04e-09,4;UBERON:0000995,1.04e-09,4;UBERON:0003975,6.00e-08,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,1.64270195644597,3.81297727554876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0.897099276263873,0.827292452285488,0.777804753376191,0.387479470433193,0.168956125490778,0.469428954583016,2.21347454234715,3.56521771047417,2.41584120826006,1.44015003128933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.88369097422942,5.65197296639697,5.87596157274275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p11@Usp7}} | ||
|EntrezGene=252870 | |||
|HGNC= | |||
|MCL_coexpression_id=834 | |||
|UniProt=E9PXY8 | |||
|association_with_transcript=-58bp_to_ENSMUST00000160405,uc007ycz.1_5end | |||
|description=CAGE_peak_11_at_Usp7_5end | |||
|id=chr16:8792459..8792470,- | |||
|ontology_enrichment_celltype=CL:0000349!1.95e-10!3;CL:0000351!1.95e-10!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,7.38e-28,3;CL:0000351,7.38e-28,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!2.37e-33!18;UBERON:0005564!2.37e-33!18;UBERON:0003133!7.04e-32!24;UBERON:0004176!5.53e-31!17;UBERON:0009196!5.53e-31!17;UBERON:0009117!5.53e-31!17;UBERON:0005156!3.89e-29!26;UBERON:0000990!3.89e-29!26;UBERON:0000473!9.71e-24!14;UBERON:0003135!5.25e-22!15;UBERON:0003101!1.72e-20!16;UBERON:0000079!1.72e-20!16;UBERON:0002323!1.04e-16!37;UBERON:0004458!1.04e-16!37;UBERON:0003886!3.53e-16!38;UBERON:0002553!1.13e-15!39;UBERON:0000358!1.95e-10!3;UBERON:0000307!1.95e-10!3;UBERON:0005631!1.21e-09!3;UBERON:0000478!1.21e-09!3;UBERON:0000158!1.21e-09!3;UBERON:0000464!1.25e-09!57;UBERON:0000466!5.26e-09!79;UBERON:0003134!6.31e-09!8;UBERON:0000992!7.43e-09!3;UBERON:0000474!6.75e-08!9;UBERON:0001987!2.94e-07!2;UBERON:0003124!2.94e-07!2;UBERON:0004340!2.94e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,7.38e-28,3;UBERON:0000307,7.38e-28,3;UBERON:0007010,7.38e-28,3;UBERON:0001987,1.94e-18,2;UBERON:0003124,1.94e-18,2;UBERON:0004340,1.94e-18,2;UBERON:0003133,2.01e-17,24;UBERON:0005156,4.55e-16,26;UBERON:0000990,4.55e-16,26;UBERON:0000473,1.62e-15,14;UBERON:0003135,1.71e-14,15;UBERON:0003101,1.34e-13,16;UBERON:0000079,1.34e-13,16;UBERON:0004176,8.30e-13,17;UBERON:0009196,8.30e-13,17;UBERON:0009117,8.30e-13,17;UBERON:0005631,1.24e-12,3;UBERON:0000478,1.24e-12,3;UBERON:0000158,1.24e-12,3;UBERON:0000991,4.20e-12,18;UBERON:0005564,4.20e-12,18;UBERON:0005795,1.04e-09,4;UBERON:0000995,1.04e-09,4;UBERON:0003975,6.00e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,1.64270195644597,3.81297727554876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0.897099276263873,0.827292452285488,0.777804753376191,0.387479470433193,0.168956125490778,0.469428954583016,2.21347454234715,3.56521771047417,2.41584120826006,1.44015003128933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.88369097422942,5.65197296639697,5.87596157274275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p11@Usp7 | |||
}} |
Revision as of 13:13, 13 September 2013
Short description: | p11@Usp7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Usp7_5end |
Coexpression cluster: | MCL_coexpression_mm9:834 |
Association with transcript: | -58bp_to_ENSMUST00000160405, uc007ycz.1_5end |
EntrezGene: | Usp7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 7.38e-28 | 3 |
trophoblast cell | 7.38e-28 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 7.38e-28 | 3 |
blastula | 7.38e-28 | 3 |
cleaving embryo | 7.38e-28 | 3 |
placenta | 1.94e-18 | 2 |
chorion | 1.94e-18 | 2 |
allantois | 1.94e-18 | 2 |
reproductive organ | 2.01e-17 | 24 |
reproductive structure | 4.55e-16 | 26 |
reproductive system | 4.55e-16 | 26 |
testis | 1.62e-15 | 14 |
male reproductive organ | 1.71e-14 | 15 |
male organism | 1.34e-13 | 16 |
male reproductive system | 1.34e-13 | 16 |
external genitalia | 8.30e-13 | 17 |
indifferent external genitalia | 8.30e-13 | 17 |
indifferent gonad | 8.30e-13 | 17 |
extraembryonic membrane | 1.24e-12 | 3 |
extraembryonic structure | 1.24e-12 | 3 |
membranous layer | 1.24e-12 | 3 |
gonad | 4.20e-12 | 18 |
gonad primordium | 4.20e-12 | 18 |
embryonic uterus | 1.04e-09 | 4 |
uterus | 1.04e-09 | 4 |
internal female genitalia | 6.00e-08 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.