FFCP PHASE1:Hg19::chr5:133984068..133984080,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10802|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10703|TSSclassifier=W|UniProt=O95486|association_with_transcript=-394bp_to_NM_001252231,NM_021982_5end|coexpression_cluster_id=C196|description=CAGE_peak_14_at_SEC24A_5end|id=chr5:133984068..133984080,+|ontology_enrichment_celltype=CL:0002322!1.52e-12!5;CL:0000039!1.24e-09!7;CL:0000586!1.24e-09!7;CL:0000047!4.00e-08!8|ontology_enrichment_celltype_v019=CL:0000039;1.28e-84;7!CL:0000586;1.28e-84;7|ontology_enrichment_celltype_v019_2=CL:0000039,1.28e-84,7;CL:0000586,1.28e-84,7|ontology_enrichment_development_v019=UBERON:0009117;1.10e-59;10!UBERON:0005564;1.10e-59;10!UBERON:0006603;3.66e-08;65|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3095;7.08e-28;22!DOID:2994;7.08e-28;22|ontology_enrichment_disease_v019_2=DOID:3095,7.08e-28,22;DOID:2994,7.08e-28,22|ontology_enrichment_uberon=UBERON:0000473!1.90e-12!8;UBERON:0003135!5.95e-09!11;UBERON:0000991!4.23e-08!21;UBERON:0009196!4.23e-08!21;UBERON:0009117!4.23e-08!21;UBERON:0005564!4.23e-08!21;UBERON:0004176!1.10e-07!22|ontology_enrichment_uberon_v019=UBERON:0000473;3.11e-74;8!UBERON:0003135;2.16e-54;11!UBERON:0000991;3.84e-29;21!UBERON:0003101;7.08e-28;22!UBERON:0000079;7.08e-28;22!UBERON:0002323;4.72e-14;45!UBERON:0003133;5.70e-13;44!UBERON:0000922;3.16e-11;49!UBERON:0002553;1.71e-09;52!UBERON:0005156;1.96e-09;59!UBERON:0000990;1.96e-09;59!UBERON:0004458;3.39e-08;48|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.11e-74,8;UBERON:0003135,2.16e-54,11;UBERON:0000991,3.84e-29,21;UBERON:0009196,3.84e-29,21;UBERON:0009117,3.84e-29,21;UBERON:0005564,3.84e-29,21;UBERON:0004176,7.08e-28,22;UBERON:0003101,7.08e-28,22;UBERON:0000079,7.08e-28,22;UBERON:0002323,5.85e-14,46;UBERON:0003133,2.00e-13,48;UBERON:0004458,3.57e-13,49;UBERON:0003886,4.68e-12,54;UBERON:0005156,3.99e-11,59;UBERON:0000990,3.99e-11,59;UBERON:0002553,8.52e-11,61|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0.447830948479849,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.116193942869518,0.621966330092223,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0.83088067605837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0.496166021811951,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50313580350515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,3.16165372200143,1.87052183685892,1.01084389488329,0.250707539292375,0.151557396436479,0,0,0.103432995861895,0,0,0.0645889098360061,0,0,0,0,0,0,0.134704106029175,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0|short_description=p14@SEC24A}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=10802 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10703 | |||
|TSSclassifier=W | |||
|UniProt=O95486 | |||
|association_with_transcript=-394bp_to_NM_001252231,NM_021982_5end | |||
|coexpression_cluster_id=C196 | |||
|description=CAGE_peak_14_at_SEC24A_5end | |||
|id=chr5:133984068..133984080,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.52e-12!5;CL:0000039!1.24e-09!7;CL:0000586!1.24e-09!7;CL:0000047!4.00e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.28e-84;7!CL:0000586;1.28e-84;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.28e-84,7;CL:0000586,1.28e-84,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.10e-59;10!UBERON:0005564;1.10e-59;10!UBERON:0006603;3.66e-08;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;7.08e-28;22!DOID:2994;7.08e-28;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,7.08e-28,22;DOID:2994,7.08e-28,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.90e-12!8;UBERON:0003135!5.95e-09!11;UBERON:0000991!4.23e-08!21;UBERON:0009196!4.23e-08!21;UBERON:0009117!4.23e-08!21;UBERON:0005564!4.23e-08!21;UBERON:0004176!1.10e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.11e-74;8!UBERON:0003135;2.16e-54;11!UBERON:0000991;3.84e-29;21!UBERON:0003101;7.08e-28;22!UBERON:0000079;7.08e-28;22!UBERON:0002323;4.72e-14;45!UBERON:0003133;5.70e-13;44!UBERON:0000922;3.16e-11;49!UBERON:0002553;1.71e-09;52!UBERON:0005156;1.96e-09;59!UBERON:0000990;1.96e-09;59!UBERON:0004458;3.39e-08;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.11e-74,8;UBERON:0003135,2.16e-54,11;UBERON:0000991,3.84e-29,21;UBERON:0009196,3.84e-29,21;UBERON:0009117,3.84e-29,21;UBERON:0005564,3.84e-29,21;UBERON:0004176,7.08e-28,22;UBERON:0003101,7.08e-28,22;UBERON:0000079,7.08e-28,22;UBERON:0002323,5.85e-14,46;UBERON:0003133,2.00e-13,48;UBERON:0004458,3.57e-13,49;UBERON:0003886,4.68e-12,54;UBERON:0005156,3.99e-11,59;UBERON:0000990,3.99e-11,59;UBERON:0002553,8.52e-11,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0.447830948479849,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.116193942869518,0.621966330092223,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0.83088067605837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0.496166021811951,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50313580350515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,3.16165372200143,1.87052183685892,1.01084389488329,0.250707539292375,0.151557396436479,0,0,0.103432995861895,0,0,0.0645889098360061,0,0,0,0,0,0,0.134704106029175,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p14@SEC24A | |||
}} |
Revision as of 13:13, 13 September 2013
Short description: | p14@SEC24A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_SEC24A_5end |
Coexpression cluster: | C196_testicular_iPS_H9_teratocarcinoma_HES3GFP_choriocarcinoma_endometrial |
Association with transcript: | -394bp_to_NM_001252231, NM_021982_5end |
EntrezGene: | SEC24A |
HGNC: | 10703 |
UniProt: | O95486 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.28e-84 | 7 |
germ cell | 1.28e-84 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 3.11e-74 | 8 |
male reproductive organ | 2.16e-54 | 11 |
gonad | 3.84e-29 | 21 |
indifferent external genitalia | 3.84e-29 | 21 |
indifferent gonad | 3.84e-29 | 21 |
gonad primordium | 3.84e-29 | 21 |
external genitalia | 7.08e-28 | 22 |
male organism | 7.08e-28 | 22 |
male reproductive system | 7.08e-28 | 22 |
body cavity | 5.85e-14 | 46 |
reproductive organ | 2.00e-13 | 48 |
body cavity or lining | 3.57e-13 | 49 |
body cavity precursor | 4.68e-12 | 54 |
reproductive structure | 3.99e-11 | 59 |
reproductive system | 3.99e-11 | 59 |
anatomical cavity | 8.52e-11 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 7.08e-28 | 22 |
germ cell cancer | 7.08e-28 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.