FFCP PHASE1:Mm9::chr16:90830361..90830378,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=0|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:90830361..90830378,+|id=chr16:90830361..90830378,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,1.34e-16,3;CL:0002202,1.34e-16,3;CL:0000069,1.34e-16,3;CL:0002632,1.34e-16,3;CL:0002368,1.34e-16,3;CL:0000307,1.34e-16,3;CL:0000377,1.34e-16,3;CL:0000223,2.48e-09,20;CL:0002076,8.89e-09,15;CL:0000066,2.18e-07,25;CL:0000213,4.68e-07,1;CL:0002078,4.68e-07,1;CL:0000115,4.68e-07,1;CL:0002262,4.68e-07,1;CL:1000398,4.68e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.34e-16,3;UBERON:0001005,1.34e-16,3;UBERON:0007196,1.34e-16,3;UBERON:0001558,1.34e-16,3;UBERON:0005795,2.42e-13,4;UBERON:0000995,2.42e-13,4;UBERON:0001987,2.97e-12,2;UBERON:0003124,2.97e-12,2;UBERON:0004340,2.97e-12,2;UBERON:0003975,8.76e-11,5;UBERON:0005631,1.84e-08,3;UBERON:0000478,1.84e-08,3;UBERON:0000158,1.84e-08,3;UBERON:0002394,4.68e-07,1;UBERON:0001281,4.68e-07,1;UBERON:0000353,4.68e-07,1;UBERON:0003497,4.68e-07,1;UBERON:0003909,4.68e-07,1;UBERON:0003928,4.68e-07,1;UBERON:0003835,4.68e-07,1;UBERON:0003513,4.68e-07,1;UBERON:0001280,4.68e-07,1;UBERON:0004647,4.68e-07,1;UBERON:0002294,4.68e-07,1;UBERON:0001173,4.68e-07,1;UBERON:0004912,4.68e-07,1;UBERON:0005171,4.68e-07,1;UBERON:0006834,5.34e-07,1;UBERON:0003134,6.38e-07,8|phase1_expression=0.160148847104794,0,0,0.30246421130683,1.50268718983904,0.503637815735669,0,0,0.140788722151667,0,0,0,0.171200729931206,0,0.333109761815663,0.404950534779652,0.699561878128147,0,0,0,16.2432684188543,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,1.16364251750945,0.408338712524738,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.734187008646726,2.34717403304412,0.218025156380447,0,0,0.699932108126813,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0,1.77858959222228,0,0,0,0,0.384218305321555,0,0.135005938331691,0,0,0,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0.151143120213571,5.79728977403356,0,0,0,0,0,1.82577746171277,0.170430322578058,0,0.70667914902068,0.281686839553361,0,0,0,1.29894624606728,1.26679932737549,2.02209778005913,2.74041311325744,0.258937883647172,0.148442139064825,0.173485326766136,0,0,0.452167921657868,0.470354828542819,0.502666365318702,0.494389935468748,0,0,0,0.220841518460394,0,0,0,0.209446706813455,0,0,0,0,0,0,0.251308704225729,0.173824320192276,0,0,0.162241263067758,0.101839363850316,0,0.252722758433675,0.420883711772948,0.130120442962704,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.162137619091711,0,0.219550115291051,0,0,0.102904612379284,0,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0.296452627087149,0,0,0,0.608580364165509,0,0.763877555344259,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0.476087281772027,0.780534591431195,0.157635144106191,0,0.159454768657487,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0.94652465824877,0.780877488593277,0.430846795465598,0.955875191810208,0,0,0,0,0.395287777946524,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.356737635204141,0,0.608929898229199,6.33613611772018,1.90648863777438,0.220528398054962,0.32977250588296,0,0.180938774784468,0.358117032009409,0.164140899745061,0,0,0.170870880797853,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0.269728692769641,0.0826534557253359,0,0,0,102.592114840523,0,0,0,0,0,0,0,0,0,23.0424005006292,0,0.202725215290164,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,3.56596703357246,0.183151624267265,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0,0,0,0.188218760830661,0.0846146078916765,0,0,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0.214871054048298,0.191288332068843,0.661774257358546,0.231867835620421|short_description=p@chr16:90830361..90830378,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:90830361..90830378,+ | |||
|id=chr16:90830361..90830378,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.34e-16,3;CL:0002202,1.34e-16,3;CL:0000069,1.34e-16,3;CL:0002632,1.34e-16,3;CL:0002368,1.34e-16,3;CL:0000307,1.34e-16,3;CL:0000377,1.34e-16,3;CL:0000223,2.48e-09,20;CL:0002076,8.89e-09,15;CL:0000066,2.18e-07,25;CL:0000213,4.68e-07,1;CL:0002078,4.68e-07,1;CL:0000115,4.68e-07,1;CL:0002262,4.68e-07,1;CL:1000398,4.68e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.34e-16,3;UBERON:0001005,1.34e-16,3;UBERON:0007196,1.34e-16,3;UBERON:0001558,1.34e-16,3;UBERON:0005795,2.42e-13,4;UBERON:0000995,2.42e-13,4;UBERON:0001987,2.97e-12,2;UBERON:0003124,2.97e-12,2;UBERON:0004340,2.97e-12,2;UBERON:0003975,8.76e-11,5;UBERON:0005631,1.84e-08,3;UBERON:0000478,1.84e-08,3;UBERON:0000158,1.84e-08,3;UBERON:0002394,4.68e-07,1;UBERON:0001281,4.68e-07,1;UBERON:0000353,4.68e-07,1;UBERON:0003497,4.68e-07,1;UBERON:0003909,4.68e-07,1;UBERON:0003928,4.68e-07,1;UBERON:0003835,4.68e-07,1;UBERON:0003513,4.68e-07,1;UBERON:0001280,4.68e-07,1;UBERON:0004647,4.68e-07,1;UBERON:0002294,4.68e-07,1;UBERON:0001173,4.68e-07,1;UBERON:0004912,4.68e-07,1;UBERON:0005171,4.68e-07,1;UBERON:0006834,5.34e-07,1;UBERON:0003134,6.38e-07,8 | |||
|phase1_expression=0.160148847104794,0,0,0.30246421130683,1.50268718983904,0.503637815735669,0,0,0.140788722151667,0,0,0,0.171200729931206,0,0.333109761815663,0.404950534779652,0.699561878128147,0,0,0,16.2432684188543,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,1.16364251750945,0.408338712524738,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.734187008646726,2.34717403304412,0.218025156380447,0,0,0.699932108126813,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0,1.77858959222228,0,0,0,0,0.384218305321555,0,0.135005938331691,0,0,0,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0.151143120213571,5.79728977403356,0,0,0,0,0,1.82577746171277,0.170430322578058,0,0.70667914902068,0.281686839553361,0,0,0,1.29894624606728,1.26679932737549,2.02209778005913,2.74041311325744,0.258937883647172,0.148442139064825,0.173485326766136,0,0,0.452167921657868,0.470354828542819,0.502666365318702,0.494389935468748,0,0,0,0.220841518460394,0,0,0,0.209446706813455,0,0,0,0,0,0,0.251308704225729,0.173824320192276,0,0,0.162241263067758,0.101839363850316,0,0.252722758433675,0.420883711772948,0.130120442962704,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.162137619091711,0,0.219550115291051,0,0,0.102904612379284,0,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0.296452627087149,0,0,0,0.608580364165509,0,0.763877555344259,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0.476087281772027,0.780534591431195,0.157635144106191,0,0.159454768657487,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0.94652465824877,0.780877488593277,0.430846795465598,0.955875191810208,0,0,0,0,0.395287777946524,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.356737635204141,0,0.608929898229199,6.33613611772018,1.90648863777438,0.220528398054962,0.32977250588296,0,0.180938774784468,0.358117032009409,0.164140899745061,0,0,0.170870880797853,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0.269728692769641,0.0826534557253359,0,0,0,102.592114840523,0,0,0,0,0,0,0,0,0,23.0424005006292,0,0.202725215290164,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,3.56596703357246,0.183151624267265,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0,0,0,0.188218760830661,0.0846146078916765,0,0,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0.214871054048298,0.191288332068843,0.661774257358546,0.231867835620421 | |||
|short_description=p@chr16:90830361..90830378,+ | |||
}} |
Revision as of 13:16, 13 September 2013
Short description: | p@chr16:90830361..90830378, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:90830361..90830378, + |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.34e-16 | 3 |
epithelial cell of tracheobronchial tree | 1.34e-16 | 3 |
branched duct epithelial cell | 1.34e-16 | 3 |
epithelial cell of lower respiratory tract | 1.34e-16 | 3 |
respiratory epithelial cell | 1.34e-16 | 3 |
tracheal epithelial cell | 1.34e-16 | 3 |
tracheoblast | 1.34e-16 | 3 |
endodermal cell | 2.48e-09 | 20 |
endo-epithelial cell | 8.89e-09 | 15 |
epithelial cell | 2.18e-07 | 25 |
lining cell | 4.68e-07 | 1 |
meso-epithelial cell | 4.68e-07 | 1 |
endothelial cell | 4.68e-07 | 1 |
endothelial cell of sinusoid | 4.68e-07 | 1 |
endothelial cell of hepatic sinusoid | 4.68e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.34e-16 | 3 |
respiratory airway | 1.34e-16 | 3 |
tracheobronchial tree | 1.34e-16 | 3 |
lower respiratory tract | 1.34e-16 | 3 |
embryonic uterus | 2.42e-13 | 4 |
uterus | 2.42e-13 | 4 |
placenta | 2.97e-12 | 2 |
chorion | 2.97e-12 | 2 |
allantois | 2.97e-12 | 2 |
internal female genitalia | 8.76e-11 | 5 |
extraembryonic membrane | 1.84e-08 | 3 |
extraembryonic structure | 1.84e-08 | 3 |
membranous layer | 1.84e-08 | 3 |
bile duct | 4.68e-07 | 1 |
hepatic sinusoid | 4.68e-07 | 1 |
parenchyma | 4.68e-07 | 1 |
abdomen blood vessel | 4.68e-07 | 1 |
sinusoid | 4.68e-07 | 1 |
digestive system duct | 4.68e-07 | 1 |
abdominal segment blood vessel | 4.68e-07 | 1 |
trunk blood vessel | 4.68e-07 | 1 |
liver parenchyma | 4.68e-07 | 1 |
liver lobule | 4.68e-07 | 1 |
biliary system | 4.68e-07 | 1 |
biliary tree | 4.68e-07 | 1 |
biliary bud | 4.68e-07 | 1 |
hepatic duct | 4.68e-07 | 1 |
uterus or analog | 5.34e-07 | 1 |
female reproductive organ | 6.38e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.