FFCP PHASE1:Mm9::chr17:29232354..29232361,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=210|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:29232354..29232361,-|id=chr17:29232354..29232361,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,3.06e-23,1;CL:0002078,3.06e-23,1;CL:0000115,3.06e-23,1;CL:0002262,3.06e-23,1;CL:1000398,3.06e-23,1;CL:0000215,1.13e-08,3;CL:0002250,1.88e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002394,3.06e-23,1;UBERON:0001281,3.06e-23,1;UBERON:0000353,3.06e-23,1;UBERON:0003497,3.06e-23,1;UBERON:0003909,3.06e-23,1;UBERON:0003928,3.06e-23,1;UBERON:0003835,3.06e-23,1;UBERON:0003513,3.06e-23,1;UBERON:0001280,3.06e-23,1;UBERON:0004647,3.06e-23,1;UBERON:0002294,3.06e-23,1;UBERON:0001173,3.06e-23,1;UBERON:0004912,3.06e-23,1;UBERON:0005171,3.06e-23,1|phase1_expression=0,0.348975407639361,0,0.60492842261366,0.500895729946347,0,0,0,0.703943610758334,0.468129052643987,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0.0850432901510698,0.397163804803541,0.261199789138935,0,0,0,0.430761996159075,0,0,0,0,0.635030673459631,0.61506478758457,0,0.866554859253824,0.332469290716985,1.02084678131185,0.418531630736908,0,0.523523743973798,0,0.683045484958446,0.485510353031154,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0.0755715601067855,3.47837386442013,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,0,0,0.148442139064825,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0.359445373517761,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0,0.134206418760372,0.210289948564127,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0,0,0.169745085775188,0.234690248288502,0,0.238043640886014,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0.185194527369712,0,0,0,2.20971958992012,2.23922323717853,0.829199842826543,0,0,0,0.216010681643603,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0.316011120628178,0.202725215290164,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0.182927972872773,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:29232354..29232361,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=210 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:29232354..29232361,- | |||
|id=chr17:29232354..29232361,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,3.06e-23,1;CL:0002078,3.06e-23,1;CL:0000115,3.06e-23,1;CL:0002262,3.06e-23,1;CL:1000398,3.06e-23,1;CL:0000215,1.13e-08,3;CL:0002250,1.88e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,3.06e-23,1;UBERON:0001281,3.06e-23,1;UBERON:0000353,3.06e-23,1;UBERON:0003497,3.06e-23,1;UBERON:0003909,3.06e-23,1;UBERON:0003928,3.06e-23,1;UBERON:0003835,3.06e-23,1;UBERON:0003513,3.06e-23,1;UBERON:0001280,3.06e-23,1;UBERON:0004647,3.06e-23,1;UBERON:0002294,3.06e-23,1;UBERON:0001173,3.06e-23,1;UBERON:0004912,3.06e-23,1;UBERON:0005171,3.06e-23,1 | |||
|phase1_expression=0,0.348975407639361,0,0.60492842261366,0.500895729946347,0,0,0,0.703943610758334,0.468129052643987,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0.0850432901510698,0.397163804803541,0.261199789138935,0,0,0,0.430761996159075,0,0,0,0,0.635030673459631,0.61506478758457,0,0.866554859253824,0.332469290716985,1.02084678131185,0.418531630736908,0,0.523523743973798,0,0.683045484958446,0.485510353031154,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0.0755715601067855,3.47837386442013,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,0,0,0.148442139064825,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0.359445373517761,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0,0.134206418760372,0.210289948564127,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0,0,0.169745085775188,0.234690248288502,0,0.238043640886014,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0.185194527369712,0,0,0,2.20971958992012,2.23922323717853,0.829199842826543,0,0,0,0.216010681643603,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0.316011120628178,0.202725215290164,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0.182927972872773,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:29232354..29232361,- | |||
}} |
Revision as of 13:58, 13 September 2013
Short description: | p@chr17:29232354..29232361, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:29232354..29232361, - |
Coexpression cluster: | MCL_coexpression_mm9:210 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 3.06e-23 | 1 |
meso-epithelial cell | 3.06e-23 | 1 |
endothelial cell | 3.06e-23 | 1 |
endothelial cell of sinusoid | 3.06e-23 | 1 |
endothelial cell of hepatic sinusoid | 3.06e-23 | 1 |
barrier cell | 1.13e-08 | 3 |
intestinal crypt stem cell | 1.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bile duct | 3.06e-23 | 1 |
hepatic sinusoid | 3.06e-23 | 1 |
parenchyma | 3.06e-23 | 1 |
abdomen blood vessel | 3.06e-23 | 1 |
sinusoid | 3.06e-23 | 1 |
digestive system duct | 3.06e-23 | 1 |
abdominal segment blood vessel | 3.06e-23 | 1 |
trunk blood vessel | 3.06e-23 | 1 |
liver parenchyma | 3.06e-23 | 1 |
liver lobule | 3.06e-23 | 1 |
biliary system | 3.06e-23 | 1 |
biliary tree | 3.06e-23 | 1 |
biliary bud | 3.06e-23 | 1 |
hepatic duct | 3.06e-23 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.