FFCP PHASE1:Mm9::chr17:39983599..39983628,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=485|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:39983599..39983628,-|id=chr17:39983599..39983628,-|ontology_enrichment_celltype=CL:0002371!2.02e-28!118;CL:0000548!1.65e-27!115;CL:0000004!1.65e-27!115;CL:0000255!1.65e-27!115;CL:0000144!6.87e-27!121;CL:0000012!6.87e-27!121;CL:0002321!1.91e-21!70;CL:0000220!1.91e-21!70;CL:0000723!1.87e-19!91;CL:0000048!1.87e-19!91;CL:0000034!5.14e-17!97;CL:0000063!7.16e-15!66;CL:0000055!6.74e-13!50;CL:0000221!3.93e-11!44;CL:0000133!3.93e-11!44;CL:0002319!5.30e-11!43;CL:0000219!5.63e-11!54;CL:0000066!1.25e-09!25;CL:0000223!1.79e-09!20;CL:0000393!7.19e-09!39;CL:0000211!7.19e-09!39;CL:0002320!1.17e-08!46;CL:0000134!1.17e-08!46;CL:0000540!1.17e-07!33;CL:0000047!1.17e-07!33;CL:0000031!1.17e-07!33;CL:0000404!1.17e-07!33;CL:0000117!2.44e-07!23;CL:0000337!2.44e-07!23;CL:0002076!7.66e-07!15|ontology_enrichment_celltype_v019_2=CL:0002321,1.50e-22,70;CL:0000723,4.26e-21,91;CL:0000048,4.26e-21,91;CL:0000034,7.61e-18,97;CL:0000219,1.03e-11,54;CL:0000221,1.53e-11,44;CL:0000133,1.53e-11,44;CL:0002319,2.11e-11,43;CL:0000066,3.31e-10,25;CL:0000223,4.84e-10,20;CL:0002320,1.81e-09,46;CL:0000134,1.81e-09,46;CL:0000393,2.15e-09,39;CL:0000211,2.15e-09,39;CL:0000540,4.26e-08,33;CL:0000047,4.26e-08,33;CL:0000031,4.26e-08,33;CL:0000404,4.26e-08,33;CL:0000117,9.33e-08,23;CL:0000337,9.33e-08,23;CL:0002076,3.18e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.17e-08!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.81e-09,46;UBERON:0001017,3.66e-07,73;UBERON:0001016,7.56e-07,75|phase1_expression=1.44133962394315,3.48975407639361,4.54999239389536,6.65421264875026,19.0340377379612,1.00727563147134,3.03696432774183,2.84071311571468,2.81577444303333,3.7450324211519,1.54096171402954,1.67521533890206,2.39681021903688,1.74840804837995,5.3297561890506,1.41732687172878,6.99561878128147,2.05050407482854,1.50825876966313,8.06340338416257,0.935476191661768,3.97163804803541,3.39559725880616,0.95995453676044,3.67054849707472,4.59385571292016,3.01533397311352,1.50829862880122,4.56056206695297,3.52842181663903,1.99557459589774,51.4374845502301,11.6862309641068,47.5445043046316,4.04392267651784,2.82598897109437,3.87921776898501,2.09265815368454,3.1253413780952,3.14114246384279,2.94115744015507,2.04913645487534,2.91306211818692,4.02869817521847,2.83855407414641,1.46837401729345,21.1245662973971,4.36050312760893,9.66619204031676,6.02732687130279,4.33957907038624,10.062679505548,2.51673909086605,2.17608642603403,3.02484419228218,3.08711323243136,2.57880095944881,6.18806510732931,3.64169629547276,4.7609188134483,6.33831403506179,17.2810711355257,4.4464739805557,9.89889689009539,3.9554654502679,10.6572017241915,8.08920298399693,11.9107674649682,3.94020526772215,7.2903206699113,5.67877395648731,11.1403883917483,3.75476519617743,3.55223317723367,2.20444583341944,1.83843757322004,4.40463523997555,1.53224805702225,2.15049146558741,4.87979264601717,1.18933936683133,7.8137005583514,4.74611098302348,7.87867654044352,2.29197371665215,3.53554302568401,2.56269025438385,4.47358669980721,1.74170244666323,0.906858721281426,3.47837386442013,30.1148356943485,11.5595126730318,16.7307989407723,22.7421746106684,9.40856462904405,0.561777680527007,1.02258193546835,7.53379413348319,3.88673531961374,2.39433813620357,10.2661181931454,7.64415719119937,49.7746692207332,9.30911476348221,7.85415582972806,9.60496445528088,1.25602267690966,0,0.445326417194474,2.77576522825817,1.21786191324856,1.38369298353635,1.80867168663147,0.587943535678524,0.502666365318702,0.494389935468748,0,2.65383165584962,0,0.441683036920787,1.93950101254089,0,0,0.41889341362691,1.27728527604296,2.27648736561249,0.599902730993408,0.762421362438388,0.449371918214468,0,0.125654352112864,0.173824320192276,0.767146371990992,0.41557608911912,1.1356888414743,1.12023300235348,0.995255764880744,0.758168275301024,0.210441855886474,0.650602214813519,5.28774840196988,0.360124259610698,1.35634336052144,0.408218994907967,0.12811372028485,0.749613796477831,0.258703370739016,0.646703978798527,0.567318240503458,0.351902248327898,0.876782929710299,0.556094498451196,1.39300866608867,0.411564272815887,1.79130840136644,1.40442637462647,0,5.39910648851626,0.621377317606506,1.64168241986767,1.08037236876609,0.23674473558521,0.196764231747404,0.617068451549513,1.16266972375204,1.07309360559848,0.467061369468678,0.16455984991348,0.492502392237286,0.243206428637567,1.46199987425332,0.439100230582101,1.34206418760372,1.05144974282064,0.308713837137853,2.97376904685418,0.264450566663544,0.426576501070468,1.39342003116263,0.644337306610467,0.403367049246685,0.444756087689741,0.760902504450237,3.79623249235609,2.9645811850322,2.5133520880027,0.994782360205754,1.55971269695296,0,0.216138049874694,0.398282546508734,0.569003702859245,0.913988100877831,0,0.407302655690628,1.16371492300575,0.49095073923223,0.379419222745544,0.147610147979602,0.156998727841375,1.357368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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=485 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:39983599..39983628,- | |||
|id=chr17:39983599..39983628,- | |||
|ontology_enrichment_celltype=CL:0002371!2.02e-28!118;CL:0000548!1.65e-27!115;CL:0000004!1.65e-27!115;CL:0000255!1.65e-27!115;CL:0000144!6.87e-27!121;CL:0000012!6.87e-27!121;CL:0002321!1.91e-21!70;CL:0000220!1.91e-21!70;CL:0000723!1.87e-19!91;CL:0000048!1.87e-19!91;CL:0000034!5.14e-17!97;CL:0000063!7.16e-15!66;CL:0000055!6.74e-13!50;CL:0000221!3.93e-11!44;CL:0000133!3.93e-11!44;CL:0002319!5.30e-11!43;CL:0000219!5.63e-11!54;CL:0000066!1.25e-09!25;CL:0000223!1.79e-09!20;CL:0000393!7.19e-09!39;CL:0000211!7.19e-09!39;CL:0002320!1.17e-08!46;CL:0000134!1.17e-08!46;CL:0000540!1.17e-07!33;CL:0000047!1.17e-07!33;CL:0000031!1.17e-07!33;CL:0000404!1.17e-07!33;CL:0000117!2.44e-07!23;CL:0000337!2.44e-07!23;CL:0002076!7.66e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.50e-22,70;CL:0000723,4.26e-21,91;CL:0000048,4.26e-21,91;CL:0000034,7.61e-18,97;CL:0000219,1.03e-11,54;CL:0000221,1.53e-11,44;CL:0000133,1.53e-11,44;CL:0002319,2.11e-11,43;CL:0000066,3.31e-10,25;CL:0000223,4.84e-10,20;CL:0002320,1.81e-09,46;CL:0000134,1.81e-09,46;CL:0000393,2.15e-09,39;CL:0000211,2.15e-09,39;CL:0000540,4.26e-08,33;CL:0000047,4.26e-08,33;CL:0000031,4.26e-08,33;CL:0000404,4.26e-08,33;CL:0000117,9.33e-08,23;CL:0000337,9.33e-08,23;CL:0002076,3.18e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.17e-08!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.81e-09,46;UBERON:0001017,3.66e-07,73;UBERON:0001016,7.56e-07,75 | |||
|phase1_expression=1.44133962394315,3.48975407639361,4.54999239389536,6.65421264875026,19.0340377379612,1.00727563147134,3.03696432774183,2.84071311571468,2.81577444303333,3.7450324211519,1.54096171402954,1.67521533890206,2.39681021903688,1.74840804837995,5.3297561890506,1.41732687172878,6.99561878128147,2.05050407482854,1.50825876966313,8.06340338416257,0.935476191661768,3.97163804803541,3.39559725880616,0.95995453676044,3.67054849707472,4.59385571292016,3.01533397311352,1.50829862880122,4.56056206695297,3.52842181663903,1.99557459589774,51.4374845502301,11.6862309641068,47.5445043046316,4.04392267651784,2.82598897109437,3.87921776898501,2.09265815368454,3.1253413780952,3.14114246384279,2.94115744015507,2.04913645487534,2.91306211818692,4.02869817521847,2.83855407414641,1.46837401729345,21.1245662973971,4.36050312760893,9.66619204031676,6.02732687130279,4.33957907038624,10.062679505548,2.51673909086605,2.17608642603403,3.02484419228218,3.08711323243136,2.57880095944881,6.18806510732931,3.64169629547276,4.7609188134483,6.33831403506179,17.2810711355257,4.4464739805557,9.89889689009539,3.9554654502679,10.6572017241915,8.08920298399693,11.9107674649682,3.94020526772215,7.2903206699113,5.67877395648731,11.1403883917483,3.75476519617743,3.55223317723367,2.20444583341944,1.83843757322004,4.40463523997555,1.53224805702225,2.15049146558741,4.87979264601717,1.18933936683133,7.8137005583514,4.74611098302348,7.87867654044352,2.29197371665215,3.53554302568401,2.56269025438385,4.47358669980721,1.74170244666323,0.906858721281426,3.47837386442013,30.1148356943485,11.5595126730318,16.7307989407723,22.7421746106684,9.40856462904405,0.561777680527007,1.02258193546835,7.53379413348319,3.88673531961374,2.39433813620357,10.2661181931454,7.64415719119937,49.7746692207332,9.30911476348221,7.85415582972806,9.60496445528088,1.25602267690966,0,0.445326417194474,2.77576522825817,1.21786191324856,1.38369298353635,1.80867168663147,0.587943535678524,0.502666365318702,0.494389935468748,0,2.65383165584962,0,0.441683036920787,1.93950101254089,0,0,0.41889341362691,1.27728527604296,2.27648736561249,0.599902730993408,0.762421362438388,0.449371918214468,0,0.125654352112864,0.173824320192276,0.767146371990992,0.41557608911912,1.1356888414743,1.12023300235348,0.995255764880744,0.758168275301024,0.210441855886474,0.650602214813519,5.28774840196988,0.360124259610698,1.35634336052144,0.408218994907967,0.12811372028485,0.749613796477831,0.258703370739016,0.646703978798527,0.567318240503458,0.351902248327898,0.876782929710299,0.556094498451196,1.39300866608867,0.411564272815887,1.79130840136644,1.40442637462647,0,5.39910648851626,0.621377317606506,1.64168241986767,1.08037236876609,0.23674473558521,0.196764231747404,0.617068451549513,1.16266972375204,1.07309360559848,0.467061369468678,0.16455984991348,0.492502392237286,0.243206428637567,1.46199987425332,0.439100230582101,1.34206418760372,1.05144974282064,0.308713837137853,2.97376904685418,0.264450566663544,0.426576501070468,1.39342003116263,0.644337306610467,0.403367049246685,0.444756087689741,0.760902504450237,3.79623249235609,2.9645811850322,2.5133520880027,0.994782360205754,1.55971269695296,0,0.216138049874694,0.398282546508734,0.569003702859245,0.913988100877831,0,0.407302655690628,1.16371492300575,0.49095073923223,0.379419222745544,0.147610147979602,0.156998727841375,1.35736880313981,2.37162101669719,0.333690211432188,0.589676985339609,0.449724224769707,0,1.4470629585145,1.52775511068852,2.30156909960649,0.486405680325106,1.09824565275233,46.0058260887535,1.86070473834252,2.18426371180192,1.01031551178845,1.25578189465339,2.41221760681684,0.369506380333209,5.49525094134406,0.325929952884052,0.509235257325564,0.938760993154008,0.167506257441816,0.238043640886014,0,0.157635144106191,0.664394068946325,0.478364305972461,0.655453258862952,1.38147985492716,1.01254341007058,0,0.54390568381871,0.983528546038072,0.275936746304732,0.80275294993896,0.820481806145422,2.29508923527346,1.51482556322624,1.89304931649754,5.46614242015294,1.07711698866399,1.67278158566786,2.00518806674155,1.98153571552183,2.83367491172426,2.04579100537918,2.37172666767914,0.642642632843614,0,1.06839362200353,0.651547837414304,0.494910368917606,2.65490276679926,1.94224508923985,3.02323556964751,0.754420319023592,1.47650946440386,2.76691633149535,3.10113951801865,2.90826983582004,1.78248689192361,1.58018378967908,17.9211634577498,9.28219889233682,0.340439605753788,1.08036656418786,1.16422815404479,4.28674070063185,0.709360934569094,1.07021290561242,1.97458824722545,6.39376393140658,0.23467170806371,1.69465656691056,2.64634077665954,0.32977250588296,0.161464426695906,0.120625849856312,0.954978752025092,1.14898629821543,1.1659233465194,0.741701208042039,0.341741761595705,1.03193433981611,0.555583582109135,0.188368457004691,0,0.915112692826091,0.339956859987711,0.559805809294632,1.24379976423981,0,0.632671987162271,0.203319467126849,1.18805874903981,0.836353184057875,1.09181281873089,0.944050424693745,0.41326727862668,3.4028272457923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| |||
|short_description=p@chr17:39983599..39983628,- | |||
}} |
Revision as of 14:31, 13 September 2013
Short description: | p@chr17:39983599..39983628, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:39983599..39983628, - |
Coexpression cluster: | MCL_coexpression_mm9:485 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.50e-22 | 70 |
somatic stem cell | 4.26e-21 | 91 |
multi fate stem cell | 4.26e-21 | 91 |
stem cell | 7.61e-18 | 97 |
motile cell | 1.03e-11 | 54 |
ectodermal cell | 1.53e-11 | 44 |
neurectodermal cell | 1.53e-11 | 44 |
neural cell | 2.11e-11 | 43 |
epithelial cell | 3.31e-10 | 25 |
endodermal cell | 4.84e-10 | 20 |
connective tissue cell | 1.81e-09 | 46 |
mesenchymal cell | 1.81e-09 | 46 |
electrically responsive cell | 2.15e-09 | 39 |
electrically active cell | 2.15e-09 | 39 |
neuron | 4.26e-08 | 33 |
neuronal stem cell | 4.26e-08 | 33 |
neuroblast | 4.26e-08 | 33 |
electrically signaling cell | 4.26e-08 | 33 |
CNS neuron (sensu Vertebrata) | 9.33e-08 | 23 |
neuroblast (sensu Vertebrata) | 9.33e-08 | 23 |
endo-epithelial cell | 3.18e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.81e-09 | 46 |
central nervous system | 3.66e-07 | 73 |
nervous system | 7.56e-07 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.