FFCP PHASE1:Hg19::chr5:167181849..167181893,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57451|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29943|TSSclassifier=S|UniProt=G3V106|association_with_transcript=-47bp_to_ENST00000519204_5end|coexpression_cluster_id=C1955|description=CAGE_peak_3_at_ODZ2_5end|id=chr5:167181849..167181893,+|ontology_enrichment_celltype=CL:0002620!3.02e-13!23;CL:0000057!8.16e-10!75;CL:0002076!1.27e-09!43;CL:0000055!2.31e-08!180;CL:0000062!2.96e-08!11;CL:0000375!2.96e-08!11;CL:0000335!2.96e-08!11;CL:0000077!1.04e-07!19;CL:0000035!2.51e-07!20;CL:0000076!4.69e-07!62|ontology_enrichment_celltype_v019=CL:0002620;1.12e-14;23!CL:0002159;9.95e-10;14!CL:0000077;1.10e-09;19!CL:0002559;4.51e-09;5!CL:0000062;5.94e-08;9!CL:0000244;6.52e-08;4!CL:0000731;6.52e-08;4!CL:0000306;4.83e-07;4!CL:0002222;4.83e-07;4!CL:0002224;4.83e-07;4|ontology_enrichment_celltype_v019_2=CL:0002620,1.20e-14,23;CL:0000076,2.03e-10,63;CL:0000221,4.03e-10,72;CL:0000077,9.45e-10,19;CL:0002159,1.15e-09,14;CL:0002559,4.99e-09,5;CL:0000062,1.38e-08,11;CL:0000375,1.38e-08,11;CL:0000335,1.38e-08,11;CL:0000244,6.36e-08,4;CL:0000731,6.36e-08,4;CL:0000057,2.14e-07,76;CL:0002077,2.69e-07,34;CL:0000306,5.36e-07,4;CL:0002222,5.36e-07,4;CL:0002224,5.36e-07,4;CL:0000066,9.44e-07,253|ontology_enrichment_development_v019=CL:0000335;1.24e-08;11|ontology_enrichment_disease=DOID:17!2.94e-07!5;DOID:450!2.94e-07!5;DOID:66!2.94e-07!5;DOID:423!2.94e-07!5;DOID:0080000!2.94e-07!5;DOID:11722!2.94e-07!5|ontology_enrichment_disease_v019=DOID:17;6.72e-11;5!DOID:450;6.72e-11;5!DOID:66;6.72e-11;5!DOID:423;6.72e-11;5!DOID:0080000;6.72e-11;5!DOID:11722;6.72e-11;5!DOID:2394;2.37e-08;14|ontology_enrichment_disease_v019_2=DOID:17,6.68e-11,5;DOID:450,6.68e-11,5;DOID:66,6.68e-11,5;DOID:423,6.68e-11,5;DOID:0080000,6.68e-11,5;DOID:11722,6.68e-11,5;DOID:2394,2.00e-08,14|ontology_enrichment_uberon=UBERON:0002097!8.50e-16!40;UBERON:0003102!6.92e-15!95;UBERON:0000475!4.55e-13!365;UBERON:0002199!6.09e-13!45;UBERON:0002416!6.09e-13!45;UBERON:0000033!9.92e-13!123;UBERON:0000153!2.29e-11!129;UBERON:0007811!2.29e-11!129;UBERON:0000924!2.12e-10!173;UBERON:0006601!2.12e-10!173;UBERON:0004121!4.20e-10!169;UBERON:0001444!2.58e-08!48|ontology_enrichment_uberon_v019=UBERON:0002097;8.93e-16;41!UBERON:0010371;1.93e-15;31!UBERON:0003102;5.99e-12;50!UBERON:0002199;2.92e-11;46!UBERON:0002416;2.92e-11;46!UBERON:0001801;7.87e-11;14!UBERON:0000365;2.25e-09;5!UBERON:0002073;4.51e-09;5!UBERON:0000486;6.44e-09;12!UBERON:0007625;1.37e-08;11!UBERON:0005910;9.99e-08;6!UBERON:0000019;2.07e-07;19!UBERON:0000047;2.07e-07;19!UBERON:0004088;2.07e-07;19!UBERON:0010230;2.07e-07;19!UBERON:0000020;3.05e-07;23!UBERON:0010077;4.83e-07;4!UBERON:0005389;4.83e-07;4!UBERON:0000484;4.83e-07;4!UBERON:0000965;4.83e-07;4!UBERON:0001803;4.83e-07;4!UBERON:0000488;5.97e-07;4!UBERON:0000970;6.16e-07;20!UBERON:0001032;7.69e-07;24!UBERON:0004456;7.69e-07;24|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.52e-19,41;UBERON:0002199,1.86e-16,46;UBERON:0002416,1.86e-16,46;UBERON:0003102,2.39e-15,99;UBERON:0001801,7.13e-11,14;UBERON:0005085,7.39e-11,31;UBERON:0000365,2.11e-09,5;UBERON:0002073,4.99e-09,5;UBERON:0005086,4.99e-09,5;UBERON:0007625,1.26e-08,11;UBERON:0000033,6.94e-08,56;UBERON:0005910,9.50e-08,6;UBERON:0001444,2.34e-07,49;UBERON:0000488,4.76e-07,4;UBERON:0010077,5.36e-07,4;UBERON:0005389,5.36e-07,4;UBERON:0000484,5.36e-07,4;UBERON:0002546,5.36e-07,4;UBERON:0000965,5.36e-07,4;UBERON:0001803,5.36e-07,4;UBERON:0003073,5.36e-07,4;UBERON:0005426,5.36e-07,4;UBERON:0000019,5.78e-07,20;UBERON:0000047,5.78e-07,20;UBERON:0010312,5.78e-07,20;UBERON:0004088,5.78e-07,20;UBERON:0010230,5.78e-07,20;UBERON:0003072,5.78e-07,20;UBERON:0004128,5.78e-07,20;UBERON:0003071,5.78e-07,20;UBERON:0000020,7.26e-07,24;UBERON:0001032,7.26e-07,24;UBERON:0004456,7.26e-07,24|phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,3.32426856807327,2.04000691244253,4.38836610069323,0,0,0,0,0,0,0,0,0,0.919421224478927,5.4217065380085,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,6.51739283826656,0.869079113764942,0,0,3.97046232089085,1.55210578223795,1.58102614247627,0.0654895377488563,46.9940921897379,36.7076598356585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,6.97750483428055,0,0,0.397227542439656,0,0.354668382198357,0.560677600142307,0,0.98667019366864,0,0,0,0.756787138224657,0,0,0,0,0,0.23486899728753,0.647491777472526,0.702254033511242,0,0,0.103325781175765,0,0.494533858557114,0,0,0,0.250237039743928,0.277064115484183,4.82875382968922,2.75839016219118,0.300476117813194,0.340296549480063,65.8359962978123,26.4811162135024,20.9812582147966,46.8142109891668,18.2402976752037,23.4452891441523,8.37525853492154,59.4092689489257,13.251432701923,46.7002482351612,13.8995346949872,0.32329211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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57451 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29943 | |||
|TSSclassifier=S | |||
|UniProt=G3V106 | |||
|association_with_transcript=-47bp_to_ENST00000519204_5end | |||
|coexpression_cluster_id=C1955 | |||
|description=CAGE_peak_3_at_ODZ2_5end | |||
|id=chr5:167181849..167181893,+ | |||
|ontology_enrichment_celltype=CL:0002620!3.02e-13!23;CL:0000057!8.16e-10!75;CL:0002076!1.27e-09!43;CL:0000055!2.31e-08!180;CL:0000062!2.96e-08!11;CL:0000375!2.96e-08!11;CL:0000335!2.96e-08!11;CL:0000077!1.04e-07!19;CL:0000035!2.51e-07!20;CL:0000076!4.69e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.12e-14;23!CL:0002159;9.95e-10;14!CL:0000077;1.10e-09;19!CL:0002559;4.51e-09;5!CL:0000062;5.94e-08;9!CL:0000244;6.52e-08;4!CL:0000731;6.52e-08;4!CL:0000306;4.83e-07;4!CL:0002222;4.83e-07;4!CL:0002224;4.83e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.20e-14,23;CL:0000076,2.03e-10,63;CL:0000221,4.03e-10,72;CL:0000077,9.45e-10,19;CL:0002159,1.15e-09,14;CL:0002559,4.99e-09,5;CL:0000062,1.38e-08,11;CL:0000375,1.38e-08,11;CL:0000335,1.38e-08,11;CL:0000244,6.36e-08,4;CL:0000731,6.36e-08,4;CL:0000057,2.14e-07,76;CL:0002077,2.69e-07,34;CL:0000306,5.36e-07,4;CL:0002222,5.36e-07,4;CL:0002224,5.36e-07,4;CL:0000066,9.44e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000335;1.24e-08;11 | |||
|ontology_enrichment_disease=DOID:17!2.94e-07!5;DOID:450!2.94e-07!5;DOID:66!2.94e-07!5;DOID:423!2.94e-07!5;DOID:0080000!2.94e-07!5;DOID:11722!2.94e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;6.72e-11;5!DOID:450;6.72e-11;5!DOID:66;6.72e-11;5!DOID:423;6.72e-11;5!DOID:0080000;6.72e-11;5!DOID:11722;6.72e-11;5!DOID:2394;2.37e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.68e-11,5;DOID:450,6.68e-11,5;DOID:66,6.68e-11,5;DOID:423,6.68e-11,5;DOID:0080000,6.68e-11,5;DOID:11722,6.68e-11,5;DOID:2394,2.00e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002097!8.50e-16!40;UBERON:0003102!6.92e-15!95;UBERON:0000475!4.55e-13!365;UBERON:0002199!6.09e-13!45;UBERON:0002416!6.09e-13!45;UBERON:0000033!9.92e-13!123;UBERON:0000153!2.29e-11!129;UBERON:0007811!2.29e-11!129;UBERON:0000924!2.12e-10!173;UBERON:0006601!2.12e-10!173;UBERON:0004121!4.20e-10!169;UBERON:0001444!2.58e-08!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;8.93e-16;41!UBERON:0010371;1.93e-15;31!UBERON:0003102;5.99e-12;50!UBERON:0002199;2.92e-11;46!UBERON:0002416;2.92e-11;46!UBERON:0001801;7.87e-11;14!UBERON:0000365;2.25e-09;5!UBERON:0002073;4.51e-09;5!UBERON:0000486;6.44e-09;12!UBERON:0007625;1.37e-08;11!UBERON:0005910;9.99e-08;6!UBERON:0000019;2.07e-07;19!UBERON:0000047;2.07e-07;19!UBERON:0004088;2.07e-07;19!UBERON:0010230;2.07e-07;19!UBERON:0000020;3.05e-07;23!UBERON:0010077;4.83e-07;4!UBERON:0005389;4.83e-07;4!UBERON:0000484;4.83e-07;4!UBERON:0000965;4.83e-07;4!UBERON:0001803;4.83e-07;4!UBERON:0000488;5.97e-07;4!UBERON:0000970;6.16e-07;20!UBERON:0001032;7.69e-07;24!UBERON:0004456;7.69e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.52e-19,41;UBERON:0002199,1.86e-16,46;UBERON:0002416,1.86e-16,46;UBERON:0003102,2.39e-15,99;UBERON:0001801,7.13e-11,14;UBERON:0005085,7.39e-11,31;UBERON:0000365,2.11e-09,5;UBERON:0002073,4.99e-09,5;UBERON:0005086,4.99e-09,5;UBERON:0007625,1.26e-08,11;UBERON:0000033,6.94e-08,56;UBERON:0005910,9.50e-08,6;UBERON:0001444,2.34e-07,49;UBERON:0000488,4.76e-07,4;UBERON:0010077,5.36e-07,4;UBERON:0005389,5.36e-07,4;UBERON:0000484,5.36e-07,4;UBERON:0002546,5.36e-07,4;UBERON:0000965,5.36e-07,4;UBERON:0001803,5.36e-07,4;UBERON:0003073,5.36e-07,4;UBERON:0005426,5.36e-07,4;UBERON:0000019,5.78e-07,20;UBERON:0000047,5.78e-07,20;UBERON:0010312,5.78e-07,20;UBERON:0004088,5.78e-07,20;UBERON:0010230,5.78e-07,20;UBERON:0003072,5.78e-07,20;UBERON:0004128,5.78e-07,20;UBERON:0003071,5.78e-07,20;UBERON:0000020,7.26e-07,24;UBERON:0001032,7.26e-07,24;UBERON:0004456,7.26e-07,24 | |||
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| |||
|short_description=p3@ODZ2 | |||
}} |
Revision as of 14:38, 13 September 2013
Short description: | p3@ODZ2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ODZ2_5end |
Coexpression cluster: | C1955_Fibroblast_osteoclastoma_Mallassezderived_mesothelioma_pagetoid_mesenchymal_Mesothelial |
Association with transcript: | -47bp_to_ENST00000519204_5end |
EntrezGene: | ODZ2 |
HGNC: | 29943 |
UniProt: | G3V106 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.20e-14 | 23 |
squamous epithelial cell | 2.03e-10 | 63 |
ectodermal cell | 4.03e-10 | 72 |
mesothelial cell | 9.45e-10 | 19 |
general ecto-epithelial cell | 1.15e-09 | 14 |
hair follicle cell | 4.99e-09 | 5 |
osteoblast | 1.38e-08 | 11 |
osteoprogenitor cell | 1.38e-08 | 11 |
mesenchyme condensation cell | 1.38e-08 | 11 |
transitional epithelial cell | 6.36e-08 | 4 |
urothelial cell | 6.36e-08 | 4 |
fibroblast | 2.14e-07 | 76 |
ecto-epithelial cell | 2.69e-07 | 34 |
crystallin accumulating cell | 5.36e-07 | 4 |
vertebrate lens cell | 5.36e-07 | 4 |
lens epithelial cell | 5.36e-07 | 4 |
epithelial cell | 9.44e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
skin of body | 2.52e-19 | 41 |
integument | 1.86e-16 | 46 |
integumental system | 1.86e-16 | 46 |
surface structure | 2.39e-15 | 99 |
anterior segment of eyeball | 7.13e-11 | 14 |
ectodermal placode | 7.39e-11 | 31 |
urothelium | 2.11e-09 | 5 |
hair follicle | 4.99e-09 | 5 |
hair follicle placode | 4.99e-09 | 5 |
pigment epithelium of eye | 1.26e-08 | 11 |
head | 6.94e-08 | 56 |
transitional epithelium | 9.50e-08 | 6 |
subdivision of head | 2.34e-07 | 49 |
atypical epithelium | 4.76e-07 | 4 |
cuboidal epithelium | 5.36e-07 | 4 |
transparent eye structure | 5.36e-07 | 4 |
simple cuboidal epithelium | 5.36e-07 | 4 |
cranial placode | 5.36e-07 | 4 |
lens of camera-type eye | 5.36e-07 | 4 |
epithelium of lens | 5.36e-07 | 4 |
lens placode | 5.36e-07 | 4 |
lens vesicle | 5.36e-07 | 4 |
camera-type eye | 5.78e-07 | 20 |
simple eye | 5.78e-07 | 20 |
immature eye | 5.78e-07 | 20 |
ocular region | 5.78e-07 | 20 |
eyeball of camera-type eye | 5.78e-07 | 20 |
optic cup | 5.78e-07 | 20 |
optic vesicle | 5.78e-07 | 20 |
eye primordium | 5.78e-07 | 20 |
sense organ | 7.26e-07 | 24 |
sensory system | 7.26e-07 | 24 |
entire sense organ system | 7.26e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.68e-11 | 5 |
myotonic disease | 6.68e-11 | 5 |
muscle tissue disease | 6.68e-11 | 5 |
myopathy | 6.68e-11 | 5 |
muscular disease | 6.68e-11 | 5 |
myotonic dystrophy | 6.68e-11 | 5 |
ovarian cancer | 2.00e-08 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.