FFCP PHASE1:Hg19::chr5:78281738..78281751,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=411|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=714|TSSclassifier=S|UniProt=A8K4A0,Q8N322|association_with_transcript=14bp_to_NM_198709,uc003kfr.3_5end|description=CAGE_peak_12_at_ARSB_5end|id=chr5:78281738..78281751,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002580;5.70e-26;3!CL:0002617;5.03e-18;2!CL:0002334;1.50e-17;12!CL:0000182;3.47e-17;12!CL:0002581;4.26e-10;1!CL:0000153;7.03e-09;9!CL:0000447;7.03e-09;9|ontology_enrichment_celltype_v019_2=CL:0002580,1.60e-26,3;CL:0002617,2.24e-18,2;CL:0002334,1.16e-17,12;CL:0000182,2.75e-17,12;CL:0002581,4.09e-10,1;CL:0000153,9.75e-09,9;CL:0000447,9.75e-09,9|ontology_enrichment_development_v019=UBERON:0004161;9.35e-19;11!UBERON:0009497;7.39e-16;13!UBERON:0001041;8.84e-07;30|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4235;1.15e-09;1|ontology_enrichment_disease_v019_2=DOID:4235,2.46e-09,1|ontology_enrichment_uberon=UBERON:0002417!3.07e-08!61;UBERON:0000916!3.07e-08!61|ontology_enrichment_uberon_v019=UBERON:0000310;4.45e-21;10!UBERON:0001443;3.72e-19;11!UBERON:0002107;8.25e-11;19!UBERON:0006925;8.25e-11;19!UBERON:0001282;1.15e-09;1!UBERON:0007195;1.15e-09;1!UBERON:0009842;1.15e-09;1!UBERON:0003704;1.15e-09;1!UBERON:0001171;1.15e-09;1!UBERON:0001172;1.15e-09;1!UBERON:0004457;7.03e-09;9!UBERON:0000042;7.03e-09;9!UBERON:0002423;3.56e-08;25!UBERON:0002368;1.18e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0000310,1.60e-21,10;UBERON:0001443,1.48e-19,11;UBERON:0002107,7.14e-11,19;UBERON:0006925,7.14e-11,19;UBERON:0008836,7.14e-11,19;UBERON:0001282,1.15e-09,1;UBERON:0009842,1.15e-09,1;UBERON:0003704,1.15e-09,1;UBERON:0001171,1.15e-09,1;UBERON:0001172,1.15e-09,1;UBERON:0007195,1.76e-09,1;UBERON:0008835,2.29e-09,22;UBERON:0003894,2.29e-09,22;UBERON:0009854,5.94e-09,23;UBERON:0009569,9.02e-09,112;UBERON:0007499,3.20e-08,25;UBERON:0009497,3.20e-08,25;UBERON:0000015,3.20e-08,25;UBERON:0002423,3.20e-08,25;UBERON:0006235,3.20e-08,25;UBERON:0004161,3.20e-08,25;UBERON:0002368,3.55e-08,35;UBERON:0009856,6.74e-08,26|phase1_expression=2.18014055124668,1.92690471501885,1.12763523276777,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0.975865597581014,0,0,0.626909442956176,0,0,0.125542639594803,0,0,0.0787107813136792,0.393364276848904,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.651032612147555,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0,0.512321413058201,0.47296445977717,0,0.645484683583826,1.35426486594342,0,0,0.224723484445085,0.306083892370903,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,1.0843174571537,0,1.01392563272577,0,0,0.0945348171640679,0,0.087834785693126,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.25326102332916,0.132409180813219,0,0,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.600952235626387,0.113432183160021,0,0,0,0,0,0,0,1.35021065793013,0.194874010322397,0,0,0,0,0.201504196455281,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0.982827216677626,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0.352226082707465,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0.2933531432838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0,0,0.502257091432126,0,0,0,0,1.44781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,1.48864684691266,3.37616341233737,1.68396056659844,0.896974044789907,1.02341449813341,0.321707842287215,2.96836132889982,0,0,0.0821271560138091,0,0,0.362578348774867,0,0,0.114814448164607,0,0.131124414959424,0.451199612907412,0.0770153371044148,0,0,0.211103257785751,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0.532306030317022,0,0.18532421910392,0.572499546967965,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0.136499911407986,0.141405431953713,0,0,0,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0.563391205064483,0,0,1.426684205925,0,1.47775344708365,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0.481764225311099,0.201799707191048,0,0,0.307240764308458,0.447352215784832,0.500547425135725,0,0.556812347790485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.306806047506464,0,0,0,0,0,0,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=411 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=714 | |||
|TSSclassifier=S | |||
|UniProt=A8K4A0,Q8N322 | |||
|association_with_transcript=14bp_to_NM_198709,uc003kfr.3_5end | |||
|description=CAGE_peak_12_at_ARSB_5end | |||
|id=chr5:78281738..78281751,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002580;5.70e-26;3!CL:0002617;5.03e-18;2!CL:0002334;1.50e-17;12!CL:0000182;3.47e-17;12!CL:0002581;4.26e-10;1!CL:0000153;7.03e-09;9!CL:0000447;7.03e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,1.60e-26,3;CL:0002617,2.24e-18,2;CL:0002334,1.16e-17,12;CL:0000182,2.75e-17,12;CL:0002581,4.09e-10,1;CL:0000153,9.75e-09,9;CL:0000447,9.75e-09,9 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.35e-19;11!UBERON:0009497;7.39e-16;13!UBERON:0001041;8.84e-07;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4235;1.15e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4235,2.46e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002417!3.07e-08!61;UBERON:0000916!3.07e-08!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;4.45e-21;10!UBERON:0001443;3.72e-19;11!UBERON:0002107;8.25e-11;19!UBERON:0006925;8.25e-11;19!UBERON:0001282;1.15e-09;1!UBERON:0007195;1.15e-09;1!UBERON:0009842;1.15e-09;1!UBERON:0003704;1.15e-09;1!UBERON:0001171;1.15e-09;1!UBERON:0001172;1.15e-09;1!UBERON:0004457;7.03e-09;9!UBERON:0000042;7.03e-09;9!UBERON:0002423;3.56e-08;25!UBERON:0002368;1.18e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,1.60e-21,10;UBERON:0001443,1.48e-19,11;UBERON:0002107,7.14e-11,19;UBERON:0006925,7.14e-11,19;UBERON:0008836,7.14e-11,19;UBERON:0001282,1.15e-09,1;UBERON:0009842,1.15e-09,1;UBERON:0003704,1.15e-09,1;UBERON:0001171,1.15e-09,1;UBERON:0001172,1.15e-09,1;UBERON:0007195,1.76e-09,1;UBERON:0008835,2.29e-09,22;UBERON:0003894,2.29e-09,22;UBERON:0009854,5.94e-09,23;UBERON:0009569,9.02e-09,112;UBERON:0007499,3.20e-08,25;UBERON:0009497,3.20e-08,25;UBERON:0000015,3.20e-08,25;UBERON:0002423,3.20e-08,25;UBERON:0006235,3.20e-08,25;UBERON:0004161,3.20e-08,25;UBERON:0002368,3.55e-08,35;UBERON:0009856,6.74e-08,26 | |||
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| |||
|short_description=p12@ARSB | |||
}} |
Revision as of 16:34, 13 September 2013
Short description: | p12@ARSB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_ARSB_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_NM_198709, uc003kfr.3_5end |
EntrezGene: | ARSB |
HGNC: | 714 |
UniProt: | A8K4A0Q8N322 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 1.60e-26 | 3 |
adipocyte of breast | 2.24e-18 | 2 |
preadipocyte | 1.16e-17 | 12 |
hepatocyte | 2.75e-17 | 12 |
perirenal preadipocyte | 4.09e-10 | 1 |
GAG secreting cell | 9.75e-09 | 9 |
carbohydrate secreting cell | 9.75e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
breast | 1.60e-21 | 10 |
chest | 1.48e-19 | 11 |
liver | 7.14e-11 | 19 |
digestive gland | 7.14e-11 | 19 |
liver bud | 7.14e-11 | 19 |
intralobular bile duct | 1.15e-09 | 1 |
acinus | 1.15e-09 | 1 |
intrahepatic bile duct | 1.15e-09 | 1 |
portal lobule | 1.15e-09 | 1 |
hepatic acinus | 1.15e-09 | 1 |
stroma of bone marrow | 1.76e-09 | 1 |
hepatic diverticulum | 2.29e-09 | 22 |
liver primordium | 2.29e-09 | 22 |
digestive tract diverticulum | 5.94e-09 | 23 |
subdivision of trunk | 9.02e-09 | 112 |
epithelial sac | 3.20e-08 | 25 |
epithelium of foregut-midgut junction | 3.20e-08 | 25 |
anatomical boundary | 3.20e-08 | 25 |
hepatobiliary system | 3.20e-08 | 25 |
foregut-midgut junction | 3.20e-08 | 25 |
septum transversum | 3.20e-08 | 25 |
endocrine gland | 3.55e-08 | 35 |
sac | 6.74e-08 | 26 |
Ontology term | p-value | n |
---|---|---|
spindle cell sarcoma | 2.46e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.