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FFCP PHASE1:Mm9::chr18:76401546..76401613,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=17126|HGNC=|UniProt=Q3V3E0|association_with_transcript=0bp_to_uc008fqn.1_5end|description=CAGE_peak_1_at_Smad2_5end|id=chr18:76401546..76401613,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!2.63e-08!23;UBERON:0000974!2.63e-08!23;UBERON:0004807!2.63e-08!23;UBERON:0005058!2.63e-08!23;UBERON:0003351!2.63e-08!23;UBERON:0009113!2.63e-08!23;UBERON:0003295!2.63e-08!23;UBERON:0009722!2.63e-08!23;UBERON:0005562!2.63e-08!23;UBERON:0007690!2.63e-08!23;UBERON:0006562!1.55e-07!24;UBERON:0001557!1.55e-07!24;UBERON:0001042!1.55e-07!24;UBERON:0008814!1.55e-07!24;UBERON:0009145!1.55e-07!24;UBERON:0000072!2.37e-07!27;UBERON:0003408!2.41e-07!24;UBERON:0000065!8.93e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0000153,1.07e-09,43;UBERON:0007811,2.00e-09,36;UBERON:0002370,2.63e-08,23;UBERON:0000974,2.63e-08,23;UBERON:0004807,2.63e-08,23;UBERON:0005058,2.63e-08,23;UBERON:0003351,2.63e-08,23;UBERON:0009113,2.63e-08,23;UBERON:0003295,2.63e-08,23;UBERON:0009722,2.63e-08,23;UBERON:0005562,2.63e-08,23;UBERON:0007690,2.63e-08,23;UBERON:0006562,1.55e-07,24;UBERON:0001557,1.55e-07,24;UBERON:0001042,1.55e-07,24;UBERON:0008814,1.55e-07,24;UBERON:0009145,1.55e-07,24;UBERON:0000072,2.37e-07,27;UBERON:0003408,2.41e-07,24;UBERON:0000065,8.93e-07,41|phase1_expression=19.0577128054705,25.4752047576734,21.8399634906977,40.5302043151152,34.561805366298,14.4376173844225,19.1562365288331,32.0225842135109,33.9300820385517,41.8975502116368,27.9085288207573,35.099749957948,27.5633175189241,31.3839244684201,10.3264026162855,13.5658429151183,8.39474253753776,32.1771408665402,32.7703496317716,25.0389894560838,12.246233781754,19.5603173865744,20.6347833419759,18.2391361984484,17.8939239232393,17.8011908875656,15.9381938578858,16.8067561494993,22.4227634958521,20.4144405105544,17.7384408524244,9.52546010189447,12.916360539276,15.8481681015439,16.7533939455739,14.6286487915473,19.3960888449251,45.201416119586,31.253413780952,42.4054232618777,46.4702875544501,45.7640474922159,61.1743044819254,10.5753327099485,10.9487085717076,7.15832333430558,3.12956537739216,3.48840250208714,3.07560655828261,2.91644848611425,3.77963338388479,5.75010257459886,29.5297386661616,26.1130371124084,33.9454737133889,10.0331180054019,11.1748041576115,9.28209766099396,22.2548106945558,30.6814767977779,27.8885817542719,3.72728985276045,3.55717918444456,6.74924787961049,2.96659908770092,4.9733608046227,2.39680088414724,3.45796474789399,24.1596796678753,20.520902626417,17.6672967535161,12.2829923293636,8.39300455616131,29.1528102131591,29.8079414866715,33.0918763179608,14.3150645299205,16.4716666129892,17.9719643909805,26.7729164092293,25.8910031394819,29.1711487511786,10.8881369610539,21.3849791812038,19.4053774676549,15.6153150301044,17.0846016958924,18.2671456908795,26.3527152799481,21.6890377506474,19.7107852317141,8.60423876981386,17.6792546764015,6.47643829965381,5.84798775702902,10.3046184032387,15.308441794361,12.2709832256202,8.83272415649754,7.77347063922748,21.9715734851622,19.2489716121477,50.9610479413291,35.5533351576666,19.9171757730317,22.8023878927589,17.6933555755174,13.9304333257253,30.8136081540134,21.3756680253348,20.6447538851702,19.7902560902892,20.0635482612771,24.4170677695249,26.5750478126693,18.2216557428029,25.7082766443749,16.0505286181102,19.4614321428972,12.2942805960031,11.7046004784009,15.0311328471919,7.45567044872489,16.6885054296582,14.4518227701284,19.4147361958529,25.2809912707492,25.1959147017231,23.1267813272978,20.5213175984607,16.0125210986519,27.3926487606044,18.9468509009581,13.5529192385075,14.9607392082883,13.6282660976916,15.8869407606493,15.6752782968717,18.4487613656583,11.995185785529,30.0578223243846,27.8181546364502,34.2118046630164,39.0325478194502,36.1954175485064,41.8931865331459,32.139691523987,20.4375662883822,23.9280472155455,29.5005485061798,22.5217438929855,16.6588756644957,24.190110682627,13.5818344943645,22.6360350048738,20.1024609486678,24.5774615559632,19.0437451264889,23.017243451043,19.6769483908727,24.6252362980151,22.1476335597048,21.7805156738393,20.0699516382352,20.8260602397961,20.9280550275367,17.4377710909752,16.3471479314037,18.5952630402233,15.2675741593559,12.5656654796076,12.2807989437279,13.8316572633362,8.72341721942416,13.6688466566683,22.6390147234426,20.4859645449955,16.1314845664762,24.3148605610167,23.4559038579043,22.6806731926884,21.5801371346977,20.4587800337281,24.5391057685201,17.0830462156024,19.9285735216053,24.1281800448259,24.0737331169792,22.0309418444606,13.4822911298133,18.8040103390984,16.1304431336037,14.2250925714811,19.9934897067025,20.2873924211545,19.5505274731502,22.304536024277,23.0746847439148,17.8327034690406,20.0749801252259,16.9558626068685,13.9438795231635,12.1545577105731,15.6834399373128,12.9728936774714,13.0420025183215,16.8373900752457,14.9529839046498,18.3330613282622,14.6725030099913,18.321280625579,10.7078951143352,27.3159592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|EntrezGene=17126
|HGNC=
|UniProt=Q3V3E0
|association_with_transcript=0bp_to_uc008fqn.1_5end
|description=CAGE_peak_1_at_Smad2_5end
|id=chr18:76401546..76401613,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002370!2.63e-08!23;UBERON:0000974!2.63e-08!23;UBERON:0004807!2.63e-08!23;UBERON:0005058!2.63e-08!23;UBERON:0003351!2.63e-08!23;UBERON:0009113!2.63e-08!23;UBERON:0003295!2.63e-08!23;UBERON:0009722!2.63e-08!23;UBERON:0005562!2.63e-08!23;UBERON:0007690!2.63e-08!23;UBERON:0006562!1.55e-07!24;UBERON:0001557!1.55e-07!24;UBERON:0001042!1.55e-07!24;UBERON:0008814!1.55e-07!24;UBERON:0009145!1.55e-07!24;UBERON:0000072!2.37e-07!27;UBERON:0003408!2.41e-07!24;UBERON:0000065!8.93e-07!41
|ontology_enrichment_uberon_v019_2=UBERON:0000153,1.07e-09,43;UBERON:0007811,2.00e-09,36;UBERON:0002370,2.63e-08,23;UBERON:0000974,2.63e-08,23;UBERON:0004807,2.63e-08,23;UBERON:0005058,2.63e-08,23;UBERON:0003351,2.63e-08,23;UBERON:0009113,2.63e-08,23;UBERON:0003295,2.63e-08,23;UBERON:0009722,2.63e-08,23;UBERON:0005562,2.63e-08,23;UBERON:0007690,2.63e-08,23;UBERON:0006562,1.55e-07,24;UBERON:0001557,1.55e-07,24;UBERON:0001042,1.55e-07,24;UBERON:0008814,1.55e-07,24;UBERON:0009145,1.55e-07,24;UBERON:0000072,2.37e-07,27;UBERON:0003408,2.41e-07,24;UBERON:0000065,8.93e-07,41
|phase1_expression=19.0577128054705,25.4752047576734,21.8399634906977,40.5302043151152,34.561805366298,14.4376173844225,19.1562365288331,32.0225842135109,33.9300820385517,41.8975502116368,27.9085288207573,35.099749957948,27.5633175189241,31.3839244684201,10.3264026162855,13.5658429151183,8.39474253753776,32.1771408665402,32.7703496317716,25.0389894560838,12.246233781754,19.5603173865744,20.6347833419759,18.2391361984484,17.8939239232393,17.8011908875656,15.9381938578858,16.8067561494993,22.4227634958521,20.4144405105544,17.7384408524244,9.52546010189447,12.916360539276,15.8481681015439,16.7533939455739,14.6286487915473,19.3960888449251,45.201416119586,31.253413780952,42.4054232618777,46.4702875544501,45.7640474922159,61.1743044819254,10.5753327099485,10.9487085717076,7.15832333430558,3.12956537739216,3.48840250208714,3.07560655828261,2.91644848611425,3.77963338388479,5.75010257459886,29.5297386661616,26.1130371124084,33.9454737133889,10.0331180054019,11.1748041576115,9.28209766099396,22.2548106945558,30.6814767977779,27.8885817542719,3.72728985276045,3.55717918444456,6.74924787961049,2.96659908770092,4.9733608046227,2.39680088414724,3.45796474789399,24.1596796678753,20.520902626417,17.6672967535161,12.2829923293636,8.39300455616131,29.1528102131591,29.8079414866715,33.0918763179608,14.3150645299205,16.4716666129892,17.9719643909805,26.7729164092293,25.8910031394819,29.1711487511786,10.8881369610539,21.3849791812038,19.4053774676549,15.6153150301044,17.0846016958924,18.2671456908795,26.3527152799481,21.6890377506474,19.7107852317141,8.60423876981386,17.6792546764015,6.47643829965381,5.84798775702902,10.3046184032387,15.308441794361,12.2709832256202,8.83272415649754,7.77347063922748,21.9715734851622,19.2489716121477,50.9610479413291,35.5533351576666,19.9171757730317,22.8023878927589,17.6933555755174,13.9304333257253,30.8136081540134,21.3756680253348,20.6447538851702,19.7902560902892,20.0635482612771,24.4170677695249,26.5750478126693,18.2216557428029,25.7082766443749,16.0505286181102,19.4614321428972,12.2942805960031,11.7046004784009,15.0311328471919,7.45567044872489,16.6885054296582,14.4518227701284,19.4147361958529,25.2809912707492,25.1959147017231,23.1267813272978,20.5213175984607,16.0125210986519,27.3926487606044,18.9468509009581,13.5529192385075,14.9607392082883,13.6282660976916,15.8869407606493,15.6752782968717,18.4487613656583,11.995185785529,30.0578223243846,27.8181546364502,34.2118046630164,39.0325478194502,36.1954175485064,41.8931865331459,32.139691523987,20.4375662883822,23.9280472155455,29.5005485061798,22.5217438929855,16.6588756644957,24.190110682627,13.5818344943645,22.6360350048738,20.1024609486678,24.5774615559632,19.0437451264889,23.017243451043,19.6769483908727,24.6252362980151,22.1476335597048,21.7805156738393,20.0699516382352,20.8260602397961,20.9280550275367,17.4377710909752,16.3471479314037,18.5952630402233,15.2675741593559,12.5656654796076,12.2807989437279,13.8316572633362,8.72341721942416,13.6688466566683,22.6390147234426,20.4859645449955,16.1314845664762,24.3148605610167,23.4559038579043,22.6806731926884,21.5801371346977,20.4587800337281,24.5391057685201,17.0830462156024,19.9285735216053,24.1281800448259,24.0737331169792,22.0309418444606,13.4822911298133,18.8040103390984,16.1304431336037,14.2250925714811,19.9934897067025,20.2873924211545,19.5505274731502,22.304536024277,23.0746847439148,17.8327034690406,20.0749801252259,16.9558626068685,13.9438795231635,12.1545577105731,15.6834399373128,12.9728936774714,13.0420025183215,16.8373900752457,14.9529839046498,18.3330613282622,14.6725030099913,18.321280625579,10.7078951143352,27.3159592401974,13.0249331683976,17.1620720213008,10.3557339958316,10.225652570749,14.473305640901,16.9972934953276,23.4969350595401,25.096606372072,20.0299201214722,19.7139808562342,20.938282180227,15.7108802984769,18.1474292507753,23.8029067600348,26.1328333785554,18.4967531642685,21.6299575424774,15.7143333497965,16.9239398540369,13.5712155545345,9.79030230873677,13.277635371514,11.5893433447988,16.215609588767,15.3547309435786,8.85248705034047,10.856249869788,27.1337068697981,24.2072021463916,29.2975820916607,31.0659437338318,31.1918143715352,30.0061122636162,21.4549671887694,22.7959569170823,24.1125544547379,14.1381379225595,21.7168330368651,16.5601011410547,19.220661203722,16.6619824202261,3.98235415019888,19.1796702562435,16.0231485191318,13.3909606626688,9.15435867930396,18.4461088766356,12.9214146584111,17.0860852854428,17.4683715408513,11.6933600436252,6.32511651449993,11.3449097573006,19.4050575279659,26.8291030106652,14.4881725836685,19.7190072229065,17.3793428969428,16.4099312193905,14.8094118541909,10.9607381681256,16.192347856396,23.7251919367479,12.7906470871878,20.1161228588606,25.3499149912572,20.5667074005011,23.7550964566242,25.6059803602296,19.2377352175701,14.0923229527987,16.0618627949982,15.6854019652049,18.5194527369712,13.1857919903284,17.3601669205702,17.3871411636957,27.5365056590046,28.2701933693789,29.1601944727334,12.4107180341965,22.4598555442606,19.9253077784312,20.7370254377858,17.7725051612298,21.8362563746178,17.262636337257,14.6296616633845,15.9671124610258,22.1641604328966,9.94142900939081,9.58277995763124,21.9789322684649,21.1786867785085,19.6395700227488,23.2487682259916,26.8640239530337,23.2367332518593,18.6192270326849,26.5294141397048,8.93861247056222,11.5212002503146,28.1249897359079,12.1635129174099,18.1798394181744,18.5786776858247,21.3041767844303,27.8153896693771,25.1208489496735,30.2763530707883,29.7851027347035,27.9678980423849,31.6594221329679,29.3348221026655,29.5370353835811,32.258025002113,13.6038230169127,16.2049745963067,20.365045450351,20.1461539636894,35.1605061138587,13.5131382324851,18.8646172995283,13.7195762610602,20.0628841614145,8.471277639256,16.1113832777512,16.6139698897425,10.998603669996,14.3867329151835,17.3740596399631,21.6007200074178,16.2115633160719,25.3759749031155,18.1216109113137,25.9468368960442,34.7151639858897,25.2685736516119,17.2605769118489,15.3017608718427,14.8913241844511,15.5572709461131,16.6888396363504,16.0459604795908,18.9522908822848,16.2226751929753,15.6559863350443,14.7017166727715,16.1343384060271,16.3116731833942,21.9095097990214,19.4685667587357,16.976011400806,21.4284668417719,20.6078488188156,16.4577241144999,16.8602015851371,18.3595866259437,18.6043413289381,18.0690010397435,18.7844429519522,17.5610853957862,18.414879800649,18.8767718245748,19.0788372363631,17.9138877367503,16.9427709685969,20.4615521584845,14.7189999126668,15.8183421004536,15.4882558321526,18.0127338502964,20.6276211886366,17.0246615541271,17.6473135295612,13.216466630364
|short_description=p1@Smad2
}}

Revision as of 16:46, 13 September 2013

Short description:p1@Smad2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Smad2_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_uc008fqn.1_5end
EntrezGene:Smad2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Smad2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G719.06
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I525.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I621.84
CD326+ enterocyte, pool1.CNhs13542.11848-124I340.53
CD326+ enterocyte, pool2.CNhs13197.11849-124I434.56
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I714.44
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I819.16
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E932.02
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E733.93
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F241.90
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E627.91
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F135.10
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E427.56
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E831.38
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A110.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A313.57
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A58.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A232.18
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A432.77
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A625.04
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H219.56
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I920.63
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D118.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D217.89
GP2+ M cell, pool1.CNhs13228.11845-124H917.80
GP2+ M cell, pool2.CNhs13231.11846-124I115.94
GP2+ M cell, pool3.CNhs13240.11847-124I216.81
Ileum epithelium, pool1.CNhs13199.10252-104B922.42
Ileum epithelium, pool2.CNhs13232.10253-104C120.41
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C817.74
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I39.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G612.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F516.75
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F614.63
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F719.40
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G845.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H131.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H342.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G946.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H245.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H461.17
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.58
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D910.95
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.16
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.92
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.78
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A229.53
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I926.11
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A133.95
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C110.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E111.17
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.28
Mouse Granule cells, donor1.CNhs12131.11713-123C322.25
Mouse Granule cells, donor2.CNhs12357.11731-123E330.68
Mouse Granule cells, donor3.CNhs12108.11636-122C727.89
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D524.16
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F520.52
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D917.67
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D229.15
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F229.81
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D633.09
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D314.32
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.97
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D426.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F425.89
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D829.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.89
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E521.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I619.41
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.62
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.08
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E118.27
Mouse Schwann, donor1.CNhs12507.11728-123D926.35
Mouse Schwann, donor2.CNhs12573.11746-123F921.69
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G319.71
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F78.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C417.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C86.48
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F610.30
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A715.31
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I712.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E38.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G621.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H119.25
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I850.96
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G119.92
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G222.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G317.69
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.93
accessory axillary lymph node, adult.CNhs10475.1063-29H930.81
adrenal gland, adult.CNhs10508.49-24D721.38
adrenal gland, embryo E14.CNhs11038.406-44C520.64
adrenal gland, embryo E16.CNhs11004.1254-43D619.79
adrenal gland, embryo E17.CNhs11043.1263-45I120.06
adrenal gland, embryo E18.CNhs11026.1262-18F524.42
adrenal gland, neonate N00.CNhs11191.1311-23C126.58
adrenal gland, neonate N25.CNhs11223.1377-27I318.22
amnion, adult pregnant day17.5.CNhs10488.583-22A825.71
aorta, adult.CNhs10498.46-23H116.05
bone (os femoris), adult.CNhs10483.56-12G219.46
bone (os femoris), neonate N02.CNhs11227.1985-43F512.29
bone (os femoris), neonate N16.CNhs11225.1525-43A611.70
bone (os femoris), neonate N20.CNhs11195.1350-25C315.03
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B216.69
cerebellum, neonate N30.CNhs11135.1395-42I214.45
colon, adult.CNhs10468.36-18H719.41
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C725.28
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D125.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D423.13
corpora quadrigemina, adult.CNhs10501.16-22A420.52
corpus striatum, adult.CNhs10487.19-21D816.01
corpus striatum, neonate N00.CNhs11226.630-43F127.39
cortex, adult.CNhs10473.12-14D518.95
cortex, neonate N30.CNhs11107.1392-42F213.55
diencephalon, adult.CNhs10482.20-12F214.96
diencephalon, neonate N30.CNhs11201.1388-42B213.63
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B115.89
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A215.68
epididymis, adult.CNhs10490.58-23B218.45
eyeball, adult.CNhs10484.31-12G412.00
eyeball, embryo E12.CNhs11016.345-16C630.06
eyeball, embryo E14.CNhs10521.399-16E227.82
eyeball, embryo E15.CNhs10593.426-16C934.21
eyeball, embryo E17.CNhs11023.1261-18D439.03
eyeball, neonate N00.CNhs11207.633-15C636.20
eyeball, neonate N01.CNhs11140.1532-43E741.89
eyeball, neonate N02.CNhs11205.1551-44G832.14
eyeball, neonate N16.CNhs11188.777-19A220.44
forelimb, embryo E11.CNhs10596.335-25E223.93
forelimb, embryo E12.CNhs10600.359-14H229.50
forelimb, embryo E13.CNhs10589.384-1E222.52
forelimb, embryo E14.CNhs10577.413-26A816.66
forelimb, embryo E15.CNhs11007.437-20E724.19
forelimb, embryo E17.CNhs10598.1517-43C413.58
forelimb, embryo E18.CNhs11008.1520-43B522.64
gonad, embryo E13.CNhs11044.1564-45I620.10
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C824.58
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D219.04
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D523.02
heart, embryo E11.CNhs10586.331-24E919.68
heart, embryo E12.CNhs11015.353-12F524.63
heart, embryo E13.CNhs11013.376-3I922.15
heart, embryo E14.CNhs10597.403-26D421.78
heart, embryo E15.CNhs11017.431-16C820.07
heart, embryo E16.CNhs11021.457-17C620.83
heart, embryo E17.CNhs11025.479-18E520.93
heart, embryo E18.CNhs11030.1283-20G317.44
heart, neonate N00.CNhs11213.639-21E316.35
heart, neonate N03.CNhs11221.1349-25I218.60
heart, neonate N10.CNhs11118.749-24G115.27
heart, neonate N16.CNhs11209.782-15G112.57
heart, neonate N20.CNhs11127.821-26I612.28
heart, neonate N25.CNhs11196.1351-25D313.83
heart, neonate N30.CNhs11202.1390-42D28.72
hippocampus, adult.CNhs10478.13-16E813.67
hippocampus, neonate N00.CNhs11228.627-43G122.64
intestinal mucosa, adult.CNhs10506.860-29I320.49
intestine, adult.CNhs10496.178-9A316.13
intestine, embryo E12.CNhs11019.1251-16I524.31
intestine, embryo E13.CNhs11010.381-16D523.46
intestine, embryo E15.CNhs10602.976-16D822.68
intestine, embryo E16.CNhs10585.463-22H421.58
intestine, embryo E17.CNhs10582.482-18D320.46
intestine, embryo E18.CNhs10526.1289-20F724.54
intestine, neonate N00.CNhs11126.644-26D117.08
intestine, neonate N01.CNhs11192.1322-23E919.93
intestine, neonate N06.CNhs11102.688-20B824.13
intestine, neonate N07.CNhs11095.720-20F224.07
intestine, neonate N10.CNhs11098.755-23A522.03
intestine, neonate N20.CNhs11187.827-18D113.48
intestine, neonate N25.CNhs11121.1352-25E318.80
intestine, neonate N30.CNhs11131.1384-42G116.13
kidney, embryo E14.CNhs10606.411-4I914.23
kidney, embryo E15.CNhs10997.434-16F819.99
kidney, embryo E16.CNhs10584.464-22A520.29
kidney, embryo E17.CNhs11028.483-18I219.55
kidney, embryo E18.CNhs11001.1288-20C722.30
kidney, neonate N00.CNhs11214.646-21G723.07
kidney, neonate N10.CNhs11206.758-6D517.83
kidney, neonate N20.CNhs11113.832-19I120.07
kidney, neonate N25.CNhs11122.1353-25F316.96
kidney, neonate N30.CNhs11203.1385-42H113.94
liver, adult pregnant day01.CNhs10466.508-5B212.15
liver, embryo E12.CNhs10601.355-15F815.68
liver, embryo E13.CNhs10524.378-3H612.97
liver, embryo E14.CNhs10594.409-16E113.04
liver, embryo E15.CNhs10520.433-16D716.84
liver, embryo E16.CNhs10523.462-17F514.95
liver, embryo E17.CNhs10510.481-18A318.33
liver, embryo E18.CNhs10579.499-43G414.67
liver, neonate N00.CNhs11117.641-24F418.32
liver, neonate N03.CNhs11123.1345-25G210.71
liver, neonate N06.CNhs11101.684-20A827.32
liver, neonate N07.CNhs11103.716-20H213.02
liver, neonate N10.CNhs11115.751-24B917.16
liver, neonate N20.CNhs11220.823-25A310.36
liver, neonate N25.CNhs11198.1368-26H110.23
liver, neonate N30.CNhs11106.1382-42D114.47
lung, adult.CNhs10474.28-22B117.00
lung, embryo E12.CNhs10522.354-16G223.50
lung, embryo E14.CNhs10604.404-26F825.10
lung, embryo E15.CNhs11020.432-17C520.03
lung, embryo E16.CNhs10998.458-17B619.71
lung, embryo E17.CNhs10605.480-44A620.94
lung, embryo E18.CNhs10583.1287-20I615.71
lung, neonate N00.CNhs11224.640-42C618.15
lung, neonate N06.CNhs11212.683-20E523.80
lung, neonate N07.CNhs11111.715-19A326.13
lung, neonate N10.CNhs11219.750-23E618.50
lung, neonate N20.CNhs11109.822-18A421.63
lung, neonate N25.CNhs11119.1359-25C715.71
lung, neonate N30.CNhs11133.1394-42H216.92
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A113.57
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A19.79
mammary gland, adult lactating day02.CNhs10480.595-22B613.28
mammary gland, adult pregnant day19.CNhs10476.588-5H211.59
medulla oblongata, adult.CNhs10477.17-12C216.22
medulla oblongata, neonate N30.CNhs11200.1396-42A315.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.85
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C210.86
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E127.13
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E224.21
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E329.30
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D731.07
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D831.19
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D930.01
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D421.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D522.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D624.11
olfactory brain, adult.CNhs10489.18-22I914.14
ovary, adult.CNhs10507.91-2I721.72
ovary, embryo E18.CNhs11040.505-44H716.56
ovary, neonate N00.CNhs11217.1299-22I419.22
oviduct, adult pregnant day01.CNhs10500.988-6G616.66
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F419.18
pancreas, embryo E15.CNhs11042.1556-45F216.02
pancreas, embryo E16.CNhs11003.460-26E513.39
pancreas, embryo E17.CNhs10599.1558-45G39.15
pancreas, embryo E18.CNhs10580.1535-43I718.45
pancreas, neonate N00.CNhs11105.645-26G912.92
pancreas, neonate N01.CNhs11138.1531-43D717.09
pancreas, neonate N02.CNhs11139.1539-43D817.47
pancreas, neonate N16.CNhs11136.787-43B611.69
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H511.34
pituitary gland, adult.CNhs10493.21-1G819.41
pituitary gland, embryo E12.CNhs11018.346-16E626.83
pituitary gland, embryo E13.CNhs11009.370-44C714.49
pituitary gland, embryo E14.CNhs11037.398-44A519.72
pituitary gland, embryo E15.CNhs10592.427-16B917.38
pituitary gland, embryo E16.CNhs11036.449-43F616.41
pituitary gland, embryo E17.CNhs11039.1265-44F514.81
pituitary gland, neonate N00.CNhs11190.1308-22E910.96
placenta, adult pregnant day10.CNhs10472.539-13I716.19
placenta, adult pregnant day17.CNhs10464.577-18G323.73
prostate, adult.CNhs10470.859-1F812.79
skin, adult.CNhs10492.30-1C320.12
skin, neonate N00.CNhs11124.650-25G425.35
skin, neonate N03.CNhs11215.662-22H320.57
skin, neonate N06.CNhs11097.693-20I523.76
skin, neonate N10.CNhs11108.762-6C425.61
small intestine, neonate N16.CNhs11114.790-21I119.24
spinal cord, adult.CNhs10505.24-13C914.09
spleen, adult.CNhs10465.25-2G216.06
spleen, embryo E16.CNhs11035.461-43C115.69
spleen, embryo E18.CNhs11011.1271-21F218.52
spleen, neonate N10.CNhs11116.752-24D113.19
spleen, neonate N20.CNhs11112.824-19H117.36
spleen, neonate N25.CNhs11099.1354-25G317.39
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C627.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C928.27
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D329.16
stomach, adult.CNhs10503.33-1H612.41
stomach, embryo E12.CNhs10588.356-43E322.46
stomach, embryo E15.CNhs10603.1252-16G819.93
stomach, embryo E16.CNhs11022.459-17D420.74
stomach, embryo E17.CNhs11006.1035-18D517.77
stomach, embryo E18.CNhs10999.1286-20C621.84
stomach, neonate N03.CNhs11193.1340-24B817.26
stomach, neonate N07.CNhs11210.718-18A914.63
stomach, neonate N25.CNhs11104.1355-25E415.97
stomach, neonate N30.CNhs11134.1386-42I122.16
submandibular gland, adult.CNhs10469.59-29C19.94
testis, adult.CNhs10504.57-7G59.58
testis, embryo E13.CNhs11031.389-23F521.98
testis, embryo E15.CNhs11034.443-27C521.18
testis, embryo E16.CNhs11033.470-26G519.64
testis, embryo E17.CNhs11029.486-18I523.25
testis, embryo E18.CNhs11027.503-18G526.86
testis, neonate N00.CNhs11189.1300-22B723.24
testis, neonate N07.CNhs11222.726-26I418.62
testis, neonate N10.CNhs11204.763-44D926.53
testis, neonate N20.CNhs11110.839-18H38.94
testis, neonate N30.CNhs11130.1391-42E211.52
thymus, adult.CNhs10471.38-12B528.12
thymus, embryo E14.CNhs11041.402-44I412.16
thymus, embryo E15.CNhs11005.430-45I218.18
thymus, embryo E16.CNhs11002.456-26C518.58
thymus, embryo E17.CNhs10581.478-18C121.30
thymus, embryo E18.CNhs10595.1273-19G427.82
thymus, neonate N02.CNhs11181.1541-43F825.12
thymus, neonate N03.CNhs11137.2104-43C730.28
thymus, neonate N06.CNhs11197.681-26C429.79
thymus, neonate N07.CNhs11211.713-19D327.97
thymus, neonate N10.CNhs11194.748-24E431.66
thymus, neonate N20.CNhs11186.820-7A229.33
thymus, neonate N25.CNhs11125.1362-25G729.54
thymus, neonate N30.CNhs11132.1393-42G232.26
tongue, adult.CNhs10499.32-1B413.60
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H316.20
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F720.37
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G520.15
urinary bladder, adult.CNhs10481.879-12E435.16
uterus, adult pregnant day19.CNhs10497.590-15F513.51
uterus, adult.CNhs10509.92-27E518.86
vagina, adult.CNhs10502.89-27D513.72
vesicular gland, adult.CNhs10491.51-27F820.06
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A216.11
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A316.61
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A414.39
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A621.60
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A825.38
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A918.12
whole body, embryo E11.CNhs11014.324-5I825.95
whole body, embryo E12.CNhs10587.857-27C934.72
whole body, embryo E13.CNhs10512.372-23H225.27
whole body, embryo E14.5.CNhs10578.420-27D217.26
whole body, embryo E14.CNhs10519.395-14B115.30
whole body, embryo E16.CNhs10514.453-14F214.89
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G515.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.69
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G516.05
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G518.95
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G516.22
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.66
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.70
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G516.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G516.31
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G521.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G519.47
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G516.98
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G521.43
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G520.61
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G516.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G516.86
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G518.36
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G518.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G518.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G518.41
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G518.88
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G519.08
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G517.91
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G516.94
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G520.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G514.72
whole body, embryo E17.5.CNhs10513.490-9F915.82
whole body, embryo E17.CNhs10517.475-3I515.49
whole body, embryo E18.CNhs10516.493-3B318.01
whole body, neonate N00.CNhs10525.657-19C220.63
whole body, neonate N01.CNhs10576.659-23C617.02
whole body, neonate N06.CNhs10515.692-21D117.65
whole body, neonate N10.CNhs10518.761-6B413.22





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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