FFCP PHASE1:Mm9::chr1:40636913..40636937,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=110895|HGNC=|MCL_coexpression_id=110|UniProt=Q8BUE1|association_with_transcript=-134bp_to_ENSMUST00000027233,NM_177084,uc007aul.1_5end|description=CAGE_peak_2_at_Slc9a4_5end|id=chr1:40636913..40636937,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,3.50e-18,3;CL:0002202,3.50e-18,3;CL:0000069,3.50e-18,3;CL:0002632,3.50e-18,3;CL:0002368,3.50e-18,3;CL:0000307,3.50e-18,3;CL:0000377,3.50e-18,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000945!2.07e-07!16;UBERON:0010039!2.07e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0000945,2.38e-23,16;UBERON:0010039,2.38e-23,16;UBERON:0003126,3.50e-18,3;UBERON:0001005,3.50e-18,3;UBERON:0007196,3.50e-18,3;UBERON:0001558,3.50e-18,3;UBERON:0005409,2.40e-09,47;UBERON:0001041,2.81e-09,80;UBERON:0004921,1.32e-08,114;UBERON:0001007,1.99e-08,116;UBERON:0001555,1.99e-08,116;UBERON:0007026,1.99e-08,116;UBERON:0004119,2.97e-08,118;UBERON:0000925,2.97e-08,118;UBERON:0006595,2.97e-08,118;UBERON:0001255,3.20e-07,1;UBERON:0001556,3.20e-07,1;UBERON:0001153,4.83e-07,1;UBERON:0001045,4.83e-07,1;UBERON:0001044,6.32e-07,1;UBERON:0001736,6.32e-07,1;UBERON:0003293,6.32e-07,1;UBERON:0003294,6.32e-07,1;UBERON:0001829,6.32e-07,1;UBERON:0010047,6.32e-07,1;UBERON:0000167,6.32e-07,1;UBERON:0006298,6.32e-07,1|phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,3.89683873820185,1.52015919285059,2.02209778005913,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0.20778804455956,0.162241263067758,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0.398282546508734,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0.632365371242573,0.295220295959204,0.784993639206874,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0.491764273019036,1.10374698521893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3653886522116,0,1.01659733563424,1.94409613479242,3.55450103224597,6.98760203987768,7.55240339754996,8.59595939543494,22.7727669526106,0.129614973291793,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39736270956253,0,0,0,0.15241361331,0,0.0974578807397524,0,0,0,0,0,0,2.51146472241848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.280924522409647,0.128050304809739,0.17230640686684,0,0,0.578727661391115,0,0.294397840268795,0,0,0.715308569841963,0,0,0,0,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p2@Slc9a4}} | ||
|EntrezGene=110895 | |||
|HGNC= | |||
|MCL_coexpression_id=110 | |||
|UniProt=Q8BUE1 | |||
|association_with_transcript=-134bp_to_ENSMUST00000027233,NM_177084,uc007aul.1_5end | |||
|description=CAGE_peak_2_at_Slc9a4_5end | |||
|id=chr1:40636913..40636937,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.50e-18,3;CL:0002202,3.50e-18,3;CL:0000069,3.50e-18,3;CL:0002632,3.50e-18,3;CL:0002368,3.50e-18,3;CL:0000307,3.50e-18,3;CL:0000377,3.50e-18,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000945!2.07e-07!16;UBERON:0010039!2.07e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,2.38e-23,16;UBERON:0010039,2.38e-23,16;UBERON:0003126,3.50e-18,3;UBERON:0001005,3.50e-18,3;UBERON:0007196,3.50e-18,3;UBERON:0001558,3.50e-18,3;UBERON:0005409,2.40e-09,47;UBERON:0001041,2.81e-09,80;UBERON:0004921,1.32e-08,114;UBERON:0001007,1.99e-08,116;UBERON:0001555,1.99e-08,116;UBERON:0007026,1.99e-08,116;UBERON:0004119,2.97e-08,118;UBERON:0000925,2.97e-08,118;UBERON:0006595,2.97e-08,118;UBERON:0001255,3.20e-07,1;UBERON:0001556,3.20e-07,1;UBERON:0001153,4.83e-07,1;UBERON:0001045,4.83e-07,1;UBERON:0001044,6.32e-07,1;UBERON:0001736,6.32e-07,1;UBERON:0003293,6.32e-07,1;UBERON:0003294,6.32e-07,1;UBERON:0001829,6.32e-07,1;UBERON:0010047,6.32e-07,1;UBERON:0000167,6.32e-07,1;UBERON:0006298,6.32e-07,1 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,3.89683873820185,1.52015919285059,2.02209778005913,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0.20778804455956,0.162241263067758,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0.398282546508734,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0.632365371242573,0.295220295959204,0.784993639206874,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0.491764273019036,1.10374698521893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3653886522116,0,1.01659733563424,1.94409613479242,3.55450103224597,6.98760203987768,7.55240339754996,8.59595939543494,22.7727669526106,0.129614973291793,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39736270956253,0,0,0,0.15241361331,0,0.0974578807397524,0,0,0,0,0,0,2.51146472241848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.280924522409647,0.128050304809739,0.17230640686684,0,0,0.578727661391115,0,0.294397840268795,0,0,0.715308569841963,0,0,0,0,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p2@Slc9a4 | |||
}} |
Revision as of 20:23, 13 September 2013
Short description: | p2@Slc9a4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc9a4_5end |
Coexpression cluster: | MCL_coexpression_mm9:110 |
Association with transcript: | -134bp_to_ENSMUST00000027233, NM_177084, uc007aul.1_5end |
EntrezGene: | Slc9a4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.50e-18 | 3 |
epithelial cell of tracheobronchial tree | 3.50e-18 | 3 |
branched duct epithelial cell | 3.50e-18 | 3 |
epithelial cell of lower respiratory tract | 3.50e-18 | 3 |
respiratory epithelial cell | 3.50e-18 | 3 |
tracheal epithelial cell | 3.50e-18 | 3 |
tracheoblast | 3.50e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
stomach | 2.38e-23 | 16 |
food storage organ | 2.38e-23 | 16 |
trachea | 3.50e-18 | 3 |
respiratory airway | 3.50e-18 | 3 |
tracheobronchial tree | 3.50e-18 | 3 |
lower respiratory tract | 3.50e-18 | 3 |
gastrointestinal system | 2.40e-09 | 47 |
foregut | 2.81e-09 | 80 |
subdivision of digestive tract | 1.32e-08 | 114 |
digestive system | 1.99e-08 | 116 |
digestive tract | 1.99e-08 | 116 |
primitive gut | 1.99e-08 | 116 |
endoderm-derived structure | 2.97e-08 | 118 |
endoderm | 2.97e-08 | 118 |
presumptive endoderm | 2.97e-08 | 118 |
urinary bladder | 3.20e-07 | 1 |
lower urinary tract | 3.20e-07 | 1 |
caecum | 4.83e-07 | 1 |
midgut | 4.83e-07 | 1 |
saliva-secreting gland | 6.32e-07 | 1 |
submandibular gland | 6.32e-07 | 1 |
gland of oral region | 6.32e-07 | 1 |
gland of foregut | 6.32e-07 | 1 |
major salivary gland | 6.32e-07 | 1 |
oral gland | 6.32e-07 | 1 |
oral cavity | 6.32e-07 | 1 |
submandibular gland primordium | 6.32e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.