FFCP PHASE1:Hg19::chr6:42110386..42110397,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=647024|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21288|TSSclassifier=S|UniProt=|association_with_transcript=-29bp_to_ENST00000356542_5end|description=CAGE_peak_3_at_C6orf132_5end|id=chr6:42110386..42110397,-|ontology_enrichment_celltype=CL:0000066!1.42e-31!254;CL:0002076!1.98e-11!43;CL:0000223!9.98e-11!59;CL:0002368!1.91e-07!13;CL:0002321!2.11e-07!248;CL:0000220!4.20e-07!246;CL:0000077!7.72e-07!19;CL:0000548!8.28e-07!679;CL:0000004!8.28e-07!679;CL:0000255!8.28e-07!679|ontology_enrichment_celltype_v019=CL:0000077;9.94e-12;19!CL:0002368;8.38e-10;13!CL:1000507;3.04e-09;10!CL:1000494;3.04e-09;10!CL:1000497;3.29e-09;17!CL:0002518;3.29e-09;17!CL:0002076;1.25e-08;42!CL:0002202;1.65e-08;9!CL:0002632;1.65e-08;9!CL:1000449;4.29e-07;15!CL:0000622;4.73e-07;5!CL:0002159;5.06e-07;14!CL:0000150;9.47e-07;9|ontology_enrichment_celltype_v019_2=CL:0000066,6.67e-27,253;CL:0000077,9.66e-12,19;CL:0002076,1.19e-11,42;CL:0000076,2.86e-11,63;CL:0002368,9.29e-10,13;CL:0000223,1.23e-09,58;CL:1000507,4.84e-09,10;CL:1000494,4.84e-09,10;CL:1000497,5.08e-09,17;CL:0002518,5.08e-09,17;CL:0002202,7.61e-09,9;CL:0002632,7.61e-09,9;CL:0002159,1.41e-07,14;CL:0000622,5.51e-07,5;CL:1000449,5.95e-07,15;CL:0002321,6.75e-07,250;CL:0000150,9.35e-07,9|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!1.36e-14!106;DOID:0050687!3.61e-11!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.07e-17!169;UBERON:0000925!1.07e-17!169;UBERON:0006595!1.07e-17!169;UBERON:0001007!1.11e-13!155;UBERON:0001555!1.11e-13!155;UBERON:0007026!1.11e-13!155;UBERON:0000466!1.85e-12!126;UBERON:0000464!8.32e-12!104;UBERON:0003104!1.70e-11!238;UBERON:0009142!1.70e-11!238;UBERON:0000077!2.51e-11!130;UBERON:0001004!4.01e-11!72;UBERON:0004921!1.06e-10!129;UBERON:0004185!1.06e-10!129;UBERON:0001041!4.06e-09!98;UBERON:0005177!8.62e-09!107;UBERON:0009569!9.61e-09!113;UBERON:0000065!3.14e-08!53;UBERON:0001048!4.20e-08!168;UBERON:0000481!5.13e-08!347;UBERON:0005911!8.88e-08!82;UBERON:0002100!2.87e-07!216;UBERON:0008947!6.75e-07!38;UBERON:0003258!6.75e-07!38;UBERON:0005178!7.11e-07!34;UBERON:0002224!7.11e-07!34|ontology_enrichment_uberon_v019=UBERON:0006554;1.41e-09;30!UBERON:0001008;1.41e-09;30!UBERON:0004211;3.04e-09;10!UBERON:0009773;3.04e-09;10!UBERON:0001231;3.04e-09;10!UBERON:0004810;3.04e-09;10!UBERON:0002113;1.15e-07;24!UBERON:0011143;1.15e-07;24!UBERON:0006555;4.29e-07;15!UBERON:0004819;4.29e-07;15!UBERON:0001285;4.29e-07;15!UBERON:0007684;4.29e-07;15!UBERON:0007196;5.87e-07;15!UBERON:0001558;5.87e-07;15!UBERON:0000161;6.06e-07;19!UBERON:0000166;6.06e-07;19|ontology_enrichment_uberon_v019_2=UBERON:0005177,4.69e-10,101;UBERON:0004119,1.10e-09,160;UBERON:0000925,1.10e-09,160;UBERON:0006595,1.10e-09,160;UBERON:0004810,4.84e-09,10;UBERON:0009569,5.16e-08,112;UBERON:0006554,9.58e-08,47;UBERON:0001008,1.84e-07,48;UBERON:0007196,2.66e-07,15;UBERON:0001558,2.66e-07,15;UBERON:0004211,5.95e-07,15;UBERON:0009773,5.95e-07,15;UBERON:0001231,5.95e-07,15;UBERON:0001285,5.95e-07,15;UBERON:0007684,5.95e-07,15;UBERON:0004208,5.95e-07,15;UBERON:0001004,7.39e-07,74|phase1_expression=0.181678379270557,1.07050261945492,0.140954404095971,0,0,1.74467704820074,0,0,0,4.91467873003018,13.2582221914761,0.655324116390517,1.31883489114227,0.866364470720326,0.662794751455832,0,0,0,0.487932798790507,0.492484232307152,0.408001382488506,0,0,0,0.125542639594803,0,0,0,0,0,0,1.83884244895785,2.409647350226,2.9580320813343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0.722878304769133,0.50133791063589,0.579386075843295,0,0,0.472674085820339,0.443458794925128,0.263504357079378,0.654895377488563,1.82147644146271,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.225222960966644,0,0,0,0,0,2.61656431285521,1.49091585508596,0.379891534993739,0.132409180813219,0.286836620748814,0.709336764396714,1.68203280042692,0,0,0,0.134710672069688,0,0,0,1.87457145467037,0,0,0.149448680551801,0,0.809364721840658,0,0,0.245668634623536,0,0,0.494533858557114,3.64064544775211,1.43723628363248,0.168336113954066,0.125118519871964,0.554128230968366,0,0.612975591598039,0,1.24775401476023,0.89694817844431,0.213557388818567,0.635795703478686,0.300091096084402,0.618315175430633,1.28820270022815,0.744467425326359,1.0126579934476,0.974370051611986,2.01947019395292,0.828449087780694,0.161646056818812,0.710019185033229,0.403008392910561,0.508681776931463,2.51239109112286,1.09098448236334,1.43402297694502,0.243947412259191,1.85541675650079,1.2781333715647,0.518305275076852,0.252320850875628,3.6497735907583,0,0,0,0,0,0.709840800239063,0.505754070234305,0.723033089650446,0.441175890929576,0.435758888184812,1.18635309555548,0.674156540800822,0.196221465125346,0.38474715694639,0.738155454624648,0,2.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=647024 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21288 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-29bp_to_ENST00000356542_5end | |||
|description=CAGE_peak_3_at_C6orf132_5end | |||
|id=chr6:42110386..42110397,- | |||
|ontology_enrichment_celltype=CL:0000066!1.42e-31!254;CL:0002076!1.98e-11!43;CL:0000223!9.98e-11!59;CL:0002368!1.91e-07!13;CL:0002321!2.11e-07!248;CL:0000220!4.20e-07!246;CL:0000077!7.72e-07!19;CL:0000548!8.28e-07!679;CL:0000004!8.28e-07!679;CL:0000255!8.28e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000077;9.94e-12;19!CL:0002368;8.38e-10;13!CL:1000507;3.04e-09;10!CL:1000494;3.04e-09;10!CL:1000497;3.29e-09;17!CL:0002518;3.29e-09;17!CL:0002076;1.25e-08;42!CL:0002202;1.65e-08;9!CL:0002632;1.65e-08;9!CL:1000449;4.29e-07;15!CL:0000622;4.73e-07;5!CL:0002159;5.06e-07;14!CL:0000150;9.47e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.67e-27,253;CL:0000077,9.66e-12,19;CL:0002076,1.19e-11,42;CL:0000076,2.86e-11,63;CL:0002368,9.29e-10,13;CL:0000223,1.23e-09,58;CL:1000507,4.84e-09,10;CL:1000494,4.84e-09,10;CL:1000497,5.08e-09,17;CL:0002518,5.08e-09,17;CL:0002202,7.61e-09,9;CL:0002632,7.61e-09,9;CL:0002159,1.41e-07,14;CL:0000622,5.51e-07,5;CL:1000449,5.95e-07,15;CL:0002321,6.75e-07,250;CL:0000150,9.35e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.36e-14!106;DOID:0050687!3.61e-11!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.07e-17!169;UBERON:0000925!1.07e-17!169;UBERON:0006595!1.07e-17!169;UBERON:0001007!1.11e-13!155;UBERON:0001555!1.11e-13!155;UBERON:0007026!1.11e-13!155;UBERON:0000466!1.85e-12!126;UBERON:0000464!8.32e-12!104;UBERON:0003104!1.70e-11!238;UBERON:0009142!1.70e-11!238;UBERON:0000077!2.51e-11!130;UBERON:0001004!4.01e-11!72;UBERON:0004921!1.06e-10!129;UBERON:0004185!1.06e-10!129;UBERON:0001041!4.06e-09!98;UBERON:0005177!8.62e-09!107;UBERON:0009569!9.61e-09!113;UBERON:0000065!3.14e-08!53;UBERON:0001048!4.20e-08!168;UBERON:0000481!5.13e-08!347;UBERON:0005911!8.88e-08!82;UBERON:0002100!2.87e-07!216;UBERON:0008947!6.75e-07!38;UBERON:0003258!6.75e-07!38;UBERON:0005178!7.11e-07!34;UBERON:0002224!7.11e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.41e-09;30!UBERON:0001008;1.41e-09;30!UBERON:0004211;3.04e-09;10!UBERON:0009773;3.04e-09;10!UBERON:0001231;3.04e-09;10!UBERON:0004810;3.04e-09;10!UBERON:0002113;1.15e-07;24!UBERON:0011143;1.15e-07;24!UBERON:0006555;4.29e-07;15!UBERON:0004819;4.29e-07;15!UBERON:0001285;4.29e-07;15!UBERON:0007684;4.29e-07;15!UBERON:0007196;5.87e-07;15!UBERON:0001558;5.87e-07;15!UBERON:0000161;6.06e-07;19!UBERON:0000166;6.06e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,4.69e-10,101;UBERON:0004119,1.10e-09,160;UBERON:0000925,1.10e-09,160;UBERON:0006595,1.10e-09,160;UBERON:0004810,4.84e-09,10;UBERON:0009569,5.16e-08,112;UBERON:0006554,9.58e-08,47;UBERON:0001008,1.84e-07,48;UBERON:0007196,2.66e-07,15;UBERON:0001558,2.66e-07,15;UBERON:0004211,5.95e-07,15;UBERON:0009773,5.95e-07,15;UBERON:0001231,5.95e-07,15;UBERON:0001285,5.95e-07,15;UBERON:0007684,5.95e-07,15;UBERON:0004208,5.95e-07,15;UBERON:0001004,7.39e-07,74 | |||
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| |||
|short_description=p3@C6orf132 | |||
}} |
Revision as of 21:01, 13 September 2013
Short description: | p3@C6orf132 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_C6orf132_5end |
Coexpression cluster: | NA |
Association with transcript: | -29bp_to_ENST00000356542_5end |
EntrezGene: | C6orf132 |
HGNC: | 21288 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.67e-27 | 253 |
mesothelial cell | 9.66e-12 | 19 |
endo-epithelial cell | 1.19e-11 | 42 |
squamous epithelial cell | 2.86e-11 | 63 |
respiratory epithelial cell | 9.29e-10 | 13 |
endodermal cell | 1.23e-09 | 58 |
kidney tubule cell | 4.84e-09 | 10 |
nephron tubule epithelial cell | 4.84e-09 | 10 |
kidney cell | 5.08e-09 | 17 |
kidney epithelial cell | 5.08e-09 | 17 |
epithelial cell of tracheobronchial tree | 7.61e-09 | 9 |
epithelial cell of lower respiratory tract | 7.61e-09 | 9 |
general ecto-epithelial cell | 1.41e-07 | 14 |
acinar cell | 5.51e-07 | 5 |
epithelial cell of nephron | 5.95e-07 | 15 |
embryonic cell | 6.75e-07 | 250 |
glandular epithelial cell | 9.35e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 4.69e-10 | 101 |
endoderm-derived structure | 1.10e-09 | 160 |
endoderm | 1.10e-09 | 160 |
presumptive endoderm | 1.10e-09 | 160 |
nephron tubule epithelium | 4.84e-09 | 10 |
subdivision of trunk | 5.16e-08 | 112 |
urinary system structure | 9.58e-08 | 47 |
renal system | 1.84e-07 | 48 |
tracheobronchial tree | 2.66e-07 | 15 |
lower respiratory tract | 2.66e-07 | 15 |
nephron epithelium | 5.95e-07 | 15 |
renal tubule | 5.95e-07 | 15 |
nephron tubule | 5.95e-07 | 15 |
nephron | 5.95e-07 | 15 |
uriniferous tubule | 5.95e-07 | 15 |
nephrogenic mesenchyme | 5.95e-07 | 15 |
respiratory system | 7.39e-07 | 74 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.