FFCP PHASE1:Mm9::chr2:26244854..26244884,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=66865|HGNC=|UniProt=Q9DC61,A2AIW9,A2AIW8|association_with_transcript=0bp_to_ENSMUST00000076431,ENSMUST00000114093,ENSMUST00000134871,ENSMUST00000135155,ENSMUST00000137686,NM_173180,uc008ivd.1,uc008ive.1_5end|description=CAGE_peak_1_at_Pmpca_5end|id=chr2:26244854..26244884,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!1.02e-11!47;UBERON:0007100!3.10e-10!18;UBERON:0000948!3.10e-10!18;UBERON:0005498!3.10e-10!18;UBERON:0004140!3.10e-10!18;UBERON:0009881!3.10e-10!18;UBERON:0004141!3.10e-10!18;UBERON:0003084!3.10e-10!18;UBERON:0007005!3.10e-10!18;UBERON:0004139!3.10e-10!18;UBERON:0004291!3.10e-10!18;UBERON:0009854!2.24e-08!23;UBERON:0009856!2.24e-08!23;UBERON:0005172!2.59e-08!49;UBERON:0005173!2.59e-08!49;UBERON:0002417!2.59e-08!49;UBERON:0000916!2.59e-08!49;UBERON:0003103!6.12e-08!43;UBERON:0002107!8.00e-08!22;UBERON:0007499!8.00e-08!22;UBERON:0006925!8.00e-08!22;UBERON:0009497!8.00e-08!22;UBERON:0000015!8.00e-08!22;UBERON:0002423!8.00e-08!22;UBERON:0006235!8.00e-08!22;UBERON:0008835!8.00e-08!22;UBERON:0003894!8.00e-08!22;UBERON:0004161!8.00e-08!22;UBERON:0008836!8.00e-08!22|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.02e-11,47;UBERON:0007100,3.10e-10,18;UBERON:0000948,3.10e-10,18;UBERON:0005498,3.10e-10,18;UBERON:0004140,3.10e-10,18;UBERON:0009881,3.10e-10,18;UBERON:0004141,3.10e-10,18;UBERON:0003084,3.10e-10,18;UBERON:0007005,3.10e-10,18;UBERON:0004139,3.10e-10,18;UBERON:0004291,3.10e-10,18;UBERON:0009854,2.24e-08,23;UBERON:0009856,2.24e-08,23;UBERON:0005172,2.59e-08,49;UBERON:0005173,2.59e-08,49;UBERON:0002417,2.59e-08,49;UBERON:0000916,2.59e-08,49;UBERON:0003103,6.12e-08,43;UBERON:0002107,8.00e-08,22;UBERON:0007499,8.00e-08,22;UBERON:0006925,8.00e-08,22;UBERON:0009497,8.00e-08,22;UBERON:0000015,8.00e-08,22;UBERON:0002423,8.00e-08,22;UBERON:0006235,8.00e-08,22;UBERON:0008835,8.00e-08,22;UBERON:0003894,8.00e-08,22;UBERON:0004161,8.00e-08,22;UBERON:0008836,8.00e-08,22;UBERON:0003104,4.70e-07,61;UBERON:0009142,4.70e-07,61|phase1_expression=26.9050063136054,32.8036883180999,24.1149596876454,27.2217790176147,14.5259761684441,25.1818907867835,32.4721570427781,31.5060909197446,22.1038293778117,27.3855495796732,36.6406452002581,45.3903584683464,34.2401459862411,36.8039894183979,68.2875011722109,45.354459895321,51.0680171033547,41.3255436619291,34.5528372686462,46.2584720459853,47.2840693239948,42.2979452115771,42.8367654187854,51.3575677166835,42.4407169974265,29.860062133981,32.3071497119306,41.5859479083766,48.0759251224626,48.8938451734266,57.4282022597239,69.2183434070998,58.4311548205342,47.5445043046316,40.1503751454272,44.0521810200005,39.4046857586372,43.5272895966384,38.2854318816662,47.1171369576418,23.5292595212406,30.7370468231301,41.2683800076481,29.4598554062851,28.5882946039031,33.5890556455877,28.9484797408774,80.0152323916239,67.0042857340139,76.9942400334162,67.8934144883008,61.8136026769378,48.992520968859,32.6412963905105,35.9620365082436,62.7713023927711,50.4298854292212,59.8179627041833,40.4632921719196,39.6743234454025,31.691570175309,65.3969946893425,56.9148669511129,36.4459385498967,36.5880554149781,38.3659262070894,32.9560121570245,35.348084089583,37.9503981049028,34.9665380279079,35.1242685456808,50.5602242394732,56.3214779426615,42.626798126804,49.45626304541,49.6378144769411,48.450987639731,47.2443150915195,44.5458946443106,40.8847491963601,35.5886933613374,40.1103295328705,46.6235608332306,43.895483582471,41.7139216430692,48.9083451886288,35.5929201997757,39.8894814066143,50.6608233399001,56.0740975992349,24.0587525622393,57.6483997577529,76.1567893752681,65.3040861881759,84.470934268197,79.7487859033257,45.0826588622923,37.6651012897508,41.0461887272533,43.4607676647719,25.2109721400258,53.8971205140135,43.3168907501298,49.7746692207332,67.3287137544876,76.7680392389549,82.9060089824245,50.4692748358245,39.3585583143701,59.6737399040596,56.5562165257603,66.3734742720468,71.4908041493781,75.2105976357587,59.9702406392095,71.252957283926,49.6861885146091,55.5261530572461,63.6919597403909,73.927450425966,73.7610671657714,66.4279096795254,78.2845397116113,44.2099003487436,43.9838084308256,50.8359539865097,46.9675288063207,51.5916348654331,41.8061047070383,38.7957756058491,32.9400434029411,28.774846633846,35.807809959609,32.9872939956126,30.7526305948149,36.0175604010422,34.0143475260056,41.9251490956013,30.8321765289083,44.403231592046,45.1517937080582,50.578462975364,44.4753460619213,46.2663790755645,41.706373979764,43.0462100157095,41.2287588062807,39.5816157230694,53.0297262614792,36.4974734723891,37.6535405710851,36.3864915829774,33.9217644055229,41.0937556496157,33.9540525073107,42.1952645655206,48.4527099246132,49.4107981660253,48.3077948972507,71.2512657522126,68.247083454499,77.2466243667754,63.2108444012511,68.2771884163491,63.7123176224872,59.7612238008548,78.872380011488,73.0951043218481,80.3052067577785,77.1587081171748,87.716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| ||
|EntrezGene=66865 | |||
|HGNC= | |||
|UniProt=Q9DC61,A2AIW9,A2AIW8 | |||
|association_with_transcript=0bp_to_ENSMUST00000076431,ENSMUST00000114093,ENSMUST00000134871,ENSMUST00000135155,ENSMUST00000137686,NM_173180,uc008ivd.1,uc008ive.1_5end | |||
|description=CAGE_peak_1_at_Pmpca_5end | |||
|id=chr2:26244854..26244884,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.02e-11!47;UBERON:0007100!3.10e-10!18;UBERON:0000948!3.10e-10!18;UBERON:0005498!3.10e-10!18;UBERON:0004140!3.10e-10!18;UBERON:0009881!3.10e-10!18;UBERON:0004141!3.10e-10!18;UBERON:0003084!3.10e-10!18;UBERON:0007005!3.10e-10!18;UBERON:0004139!3.10e-10!18;UBERON:0004291!3.10e-10!18;UBERON:0009854!2.24e-08!23;UBERON:0009856!2.24e-08!23;UBERON:0005172!2.59e-08!49;UBERON:0005173!2.59e-08!49;UBERON:0002417!2.59e-08!49;UBERON:0000916!2.59e-08!49;UBERON:0003103!6.12e-08!43;UBERON:0002107!8.00e-08!22;UBERON:0007499!8.00e-08!22;UBERON:0006925!8.00e-08!22;UBERON:0009497!8.00e-08!22;UBERON:0000015!8.00e-08!22;UBERON:0002423!8.00e-08!22;UBERON:0006235!8.00e-08!22;UBERON:0008835!8.00e-08!22;UBERON:0003894!8.00e-08!22;UBERON:0004161!8.00e-08!22;UBERON:0008836!8.00e-08!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.02e-11,47;UBERON:0007100,3.10e-10,18;UBERON:0000948,3.10e-10,18;UBERON:0005498,3.10e-10,18;UBERON:0004140,3.10e-10,18;UBERON:0009881,3.10e-10,18;UBERON:0004141,3.10e-10,18;UBERON:0003084,3.10e-10,18;UBERON:0007005,3.10e-10,18;UBERON:0004139,3.10e-10,18;UBERON:0004291,3.10e-10,18;UBERON:0009854,2.24e-08,23;UBERON:0009856,2.24e-08,23;UBERON:0005172,2.59e-08,49;UBERON:0005173,2.59e-08,49;UBERON:0002417,2.59e-08,49;UBERON:0000916,2.59e-08,49;UBERON:0003103,6.12e-08,43;UBERON:0002107,8.00e-08,22;UBERON:0007499,8.00e-08,22;UBERON:0006925,8.00e-08,22;UBERON:0009497,8.00e-08,22;UBERON:0000015,8.00e-08,22;UBERON:0002423,8.00e-08,22;UBERON:0006235,8.00e-08,22;UBERON:0008835,8.00e-08,22;UBERON:0003894,8.00e-08,22;UBERON:0004161,8.00e-08,22;UBERON:0008836,8.00e-08,22;UBERON:0003104,4.70e-07,61;UBERON:0009142,4.70e-07,61 | |||
|phase1_expression=26.9050063136054,32.8036883180999,24.1149596876454,27.2217790176147,14.5259761684441,25.1818907867835,32.4721570427781,31.5060909197446,22.1038293778117,27.3855495796732,36.6406452002581,45.3903584683464,34.2401459862411,36.8039894183979,68.2875011722109,45.354459895321,51.0680171033547,41.3255436619291,34.5528372686462,46.2584720459853,47.2840693239948,42.2979452115771,42.8367654187854,51.3575677166835,42.4407169974265,29.860062133981,32.3071497119306,41.5859479083766,48.0759251224626,48.8938451734266,57.4282022597239,69.2183434070998,58.4311548205342,47.5445043046316,40.1503751454272,44.0521810200005,39.4046857586372,43.5272895966384,38.2854318816662,47.1171369576418,23.5292595212406,30.7370468231301,41.2683800076481,29.4598554062851,28.5882946039031,33.5890556455877,28.9484797408774,80.0152323916239,67.0042857340139,76.9942400334162,67.8934144883008,61.8136026769378,48.992520968859,32.6412963905105,35.9620365082436,62.7713023927711,50.4298854292212,59.8179627041833,40.4632921719196,39.6743234454025,31.691570175309,65.3969946893425,56.9148669511129,36.4459385498967,36.5880554149781,38.3659262070894,32.9560121570245,35.348084089583,37.9503981049028,34.9665380279079,35.1242685456808,50.5602242394732,56.3214779426615,42.626798126804,49.45626304541,49.6378144769411,48.450987639731,47.2443150915195,44.5458946443106,40.8847491963601,35.5886933613374,40.1103295328705,46.6235608332306,43.895483582471,41.7139216430692,48.9083451886288,35.5929201997757,39.8894814066143,50.6608233399001,56.0740975992349,24.0587525622393,57.6483997577529,76.1567893752681,65.3040861881759,84.470934268197,79.7487859033257,45.0826588622923,37.6651012897508,41.0461887272533,43.4607676647719,25.2109721400258,53.8971205140135,43.3168907501298,49.7746692207332,67.3287137544876,76.7680392389549,82.9060089824245,50.4692748358245,39.3585583143701,59.6737399040596,56.5562165257603,66.3734742720468,71.4908041493781,75.2105976357587,59.9702406392095,71.252957283926,49.6861885146091,55.5261530572461,63.6919597403909,73.927450425966,73.7610671657714,66.4279096795254,78.2845397116113,44.2099003487436,43.9838084308256,50.8359539865097,46.9675288063207,51.5916348654331,41.8061047070383,38.7957756058491,32.9400434029411,28.774846633846,35.807809959609,32.9872939956126,30.7526305948149,36.0175604010422,34.0143475260056,41.9251490956013,30.8321765289083,44.403231592046,45.1517937080582,50.578462975364,44.4753460619213,46.2663790755645,41.706373979764,43.0462100157095,41.2287588062807,39.5816157230694,53.0297262614792,36.4974734723891,37.6535405710851,36.3864915829774,33.9217644055229,41.0937556496157,33.9540525073107,42.1952645655206,48.4527099246132,49.4107981660253,48.3077948972507,71.2512657522126,68.247083454499,77.2466243667754,63.2108444012511,68.2771884163491,63.7123176224872,59.7612238008548,78.872380011488,73.0951043218481,80.3052067577785,77.1587081171748,87.7164519286159,86.9889925180727,89.5764470387487,92.6024289446565,31.7537822331832,25.9319623195797,43.2848605708775,55.5346189993443,45.2171091134696,44.3572043253438,41.1087201617478,47.7989953357322,46.0322550758882,51.360919050391,49.8255514621737,42.8217282282428,37.9516165288407,34.8173826072014,39.3827455980623,37.7504151634773,42.7953338751895,44.2093626624695,45.5202962287396,45.5851565312818,56.3538678365402,49.0799700107207,41.1179272795367,51.4095559796035,43.759683689986,47.0876372054931,61.0725051302948,58.8604471906988,62.8479569424756,64.9027461235606,65.4541453726966,62.2868051306045,58.8294352026658,60.776644257609,56.5269390954752,49.7714317789902,45.2357282702349,73.3078973212178,63.258010872036,57.681846888618,55.5427058143918,66.9334026559846,69.0680042059362,62.7176577772377,29.3757572364901,38.0877737658674,43.1857187571369,42.6060165295722,31.2138030223708,32.4962139437123,32.1358915196119,37.2705267408396,33.4186505505125,28.3474802750432,27.9045845150602,27.3651735575282,33.155516518252,30.810249477862,48.2532108605671,60.9174365876955,41.7999632066181,45.2536263939761,38.3715910070823,39.2659150083881,40.9837363441689,134.567004199931,48.5882657901035,49.5857205256731,45.6697603193534,46.5989156007476,44.3369361423964,41.0460969643807,47.3628520959626,43.8383786866968,43.8769433520641,35.6666661228206,39.6012837731069,41.4892856544705,31.111409236533,30.6844428728916,30.5313818181915,46.8566627779114,52.6042989118667,39.4184616689827,31.5973025382427,32.5881256820563,33.5956781118688,33.081569382453,30.3022771627013,31.2876390356458,42.1674434299995,31.9720184069379,34.7248397868864,43.2146625675145,45.6636153753123,40.2953625859394,37.4187892985197,45.1273108533239,36.8589806148751,56.0215506370863,65.2387348417115,54.6526742828656,44.3262080090473,30.9986155529982,41.4963576608477,41.1937277259305,38.0797777370005,35.2902934451882,37.018066251991,33.7474049659128,37.4207228947297,43.9604028761664,45.1874646782097,47.6572196221868,46.3393431974275,43.9254092556523,45.3842408083594,40.1660668168898,45.1913914340466,59.189578316937,41.44001515912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| |||
|short_description=p1@Pmpca | |||
}} |
Revision as of 23:31, 13 September 2013
Short description: | p1@Pmpca |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pmpca_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000076431, ENSMUST00000114093, ENSMUST00000134871, ENSMUST00000135155, ENSMUST00000137686, NM_173180, uc008ivd.1, uc008ive.1_5end |
EntrezGene: | Pmpca |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube | 1.02e-11 | 47 |
primary circulatory organ | 3.10e-10 | 18 |
heart | 3.10e-10 | 18 |
primitive heart tube | 3.10e-10 | 18 |
primary heart field | 3.10e-10 | 18 |
anterior lateral plate mesoderm | 3.10e-10 | 18 |
heart tube | 3.10e-10 | 18 |
heart primordium | 3.10e-10 | 18 |
cardiac mesoderm | 3.10e-10 | 18 |
cardiogenic plate | 3.10e-10 | 18 |
heart rudiment | 3.10e-10 | 18 |
digestive tract diverticulum | 2.24e-08 | 23 |
sac | 2.24e-08 | 23 |
abdomen element | 2.59e-08 | 49 |
abdominal segment element | 2.59e-08 | 49 |
abdominal segment of trunk | 2.59e-08 | 49 |
abdomen | 2.59e-08 | 49 |
compound organ | 6.12e-08 | 43 |
liver | 8.00e-08 | 22 |
epithelial sac | 8.00e-08 | 22 |
digestive gland | 8.00e-08 | 22 |
epithelium of foregut-midgut junction | 8.00e-08 | 22 |
anatomical boundary | 8.00e-08 | 22 |
hepatobiliary system | 8.00e-08 | 22 |
foregut-midgut junction | 8.00e-08 | 22 |
hepatic diverticulum | 8.00e-08 | 22 |
liver primordium | 8.00e-08 | 22 |
septum transversum | 8.00e-08 | 22 |
liver bud | 8.00e-08 | 22 |
mesenchyme | 4.70e-07 | 61 |
entire embryonic mesenchyme | 4.70e-07 | 61 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.