FFCP PHASE1:Mm9::chr3:100276521..100276540,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=261|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:100276521..100276540,-|id=chr3:100276521..100276540,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002027,8.39e-10,3;CL:0002006,8.39e-10,3;CL:0002024,8.39e-10,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000464!8.84e-10!57;UBERON:0002323!1.22e-09!37;UBERON:0004458!1.22e-09!37;UBERON:0000466!2.14e-09!79;UBERON:0003886!3.63e-09!38;UBERON:0002553!1.02e-08!39;UBERON:0003887!9.64e-08!10;UBERON:0001048!2.91e-07!147;UBERON:0004176!3.10e-07!17;UBERON:0009196!3.10e-07!17;UBERON:0009117!3.10e-07!17;UBERON:0002106!6.89e-07!6;UBERON:0004457!6.89e-07!6;UBERON:0000042!6.89e-07!6;UBERON:0004854!6.89e-07!6;UBERON:0009034!6.89e-07!6;UBERON:0002095!6.89e-07!6;UBERON:0004782!6.89e-07!6;UBERON:0003281!6.89e-07!6;UBERON:0009664!6.89e-07!6;UBERON:0002296!6.89e-07!6;UBERON:0005602!6.89e-07!6;UBERON:0001179!6.89e-07!6;UBERON:0006293!6.89e-07!6;UBERON:0000926!7.74e-07!193;UBERON:0004120!7.74e-07!193;UBERON:0006603!7.74e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.21e-18,6;UBERON:0004457,2.21e-18,6;UBERON:0000042,2.21e-18,6;UBERON:0004854,2.21e-18,6;UBERON:0009034,2.21e-18,6;UBERON:0002095,2.21e-18,6;UBERON:0004782,2.21e-18,6;UBERON:0003281,2.21e-18,6;UBERON:0009664,2.21e-18,6;UBERON:0002296,2.21e-18,6;UBERON:0005602,2.21e-18,6;UBERON:0001179,2.21e-18,6;UBERON:0006293,2.21e-18,6;UBERON:0003887,7.07e-17,10;UBERON:0002323,4.96e-14,37;UBERON:0004458,4.96e-14,37;UBERON:0003886,1.22e-13,38;UBERON:0002553,2.87e-13,39;UBERON:0002075,1.21e-12,19;UBERON:0000998,6.57e-08,1;UBERON:0007194,6.57e-08,1;UBERON:0006868,6.57e-08,1;UBERON:0000945,4.69e-07,16;UBERON:0010039,4.69e-07,16|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0.174840804837995,0.999329285446988,1.41732687172878,2.09868563438444,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0.384218305321555,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0.304465478312141,0,0,0.23517741427141,0.125666591329675,0.247194967734374,0,2.65383165584962,0,0.883366073841574,0.969750506270444,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.497627882440372,0,0,0,0,0.180062129805349,0,0.204109497453984,0.12811372028485,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0.16455984991348,0,0.162137619091711,0,0.439100230582101,0.402619256281115,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0.123397163921801,0,0.166845105716094,0.786235980452812,0.674586337154561,0.202860121388503,0.482354319504834,0.763877555344259,0,12.8086829152278,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0.238043640886014,0.585400943573396,0.630540576424764,0,0.478364305972461,0.327726629431476,0.518054945597687,0.578596234326046,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0.329940245945071,2.65490276679926,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0,0,0,0,2.06271086496374,0,0,0.129358683782755,0,0,0.178368817602071,0.329098041204242,0.304464949114599,0.469343416127421,0.21183207086382,0,0,0.322928853391811,0.120625849856312,0,0,0.291480836629851,0,4.27177201994632,0.619160603889667,0.370389054739423,1.31857919903284,1.6403307326523,3.20289442489132,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0,0,0.247960367176008,0,0,0,7.89170114157866,0.897099276263873,0.165458490457098,0,0.258319646955462,0,0.234714477291508,0.39061315453185,0,0.483168241652012,1.44015003128933,0,0,0,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0,0,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.512200817262403,0.486213434136588,0.209613162627982,0.183843508450014,0,0,0,0,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0.282328141245992,0,0,0.263069711437843,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0.765153328275374,0,0|short_description=p@chr3:100276521..100276540,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=261 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:100276521..100276540,- | |||
|id=chr3:100276521..100276540,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,8.39e-10,3;CL:0002006,8.39e-10,3;CL:0002024,8.39e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000464!8.84e-10!57;UBERON:0002323!1.22e-09!37;UBERON:0004458!1.22e-09!37;UBERON:0000466!2.14e-09!79;UBERON:0003886!3.63e-09!38;UBERON:0002553!1.02e-08!39;UBERON:0003887!9.64e-08!10;UBERON:0001048!2.91e-07!147;UBERON:0004176!3.10e-07!17;UBERON:0009196!3.10e-07!17;UBERON:0009117!3.10e-07!17;UBERON:0002106!6.89e-07!6;UBERON:0004457!6.89e-07!6;UBERON:0000042!6.89e-07!6;UBERON:0004854!6.89e-07!6;UBERON:0009034!6.89e-07!6;UBERON:0002095!6.89e-07!6;UBERON:0004782!6.89e-07!6;UBERON:0003281!6.89e-07!6;UBERON:0009664!6.89e-07!6;UBERON:0002296!6.89e-07!6;UBERON:0005602!6.89e-07!6;UBERON:0001179!6.89e-07!6;UBERON:0006293!6.89e-07!6;UBERON:0000926!7.74e-07!193;UBERON:0004120!7.74e-07!193;UBERON:0006603!7.74e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.21e-18,6;UBERON:0004457,2.21e-18,6;UBERON:0000042,2.21e-18,6;UBERON:0004854,2.21e-18,6;UBERON:0009034,2.21e-18,6;UBERON:0002095,2.21e-18,6;UBERON:0004782,2.21e-18,6;UBERON:0003281,2.21e-18,6;UBERON:0009664,2.21e-18,6;UBERON:0002296,2.21e-18,6;UBERON:0005602,2.21e-18,6;UBERON:0001179,2.21e-18,6;UBERON:0006293,2.21e-18,6;UBERON:0003887,7.07e-17,10;UBERON:0002323,4.96e-14,37;UBERON:0004458,4.96e-14,37;UBERON:0003886,1.22e-13,38;UBERON:0002553,2.87e-13,39;UBERON:0002075,1.21e-12,19;UBERON:0000998,6.57e-08,1;UBERON:0007194,6.57e-08,1;UBERON:0006868,6.57e-08,1;UBERON:0000945,4.69e-07,16;UBERON:0010039,4.69e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0.174840804837995,0.999329285446988,1.41732687172878,2.09868563438444,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0.384218305321555,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0.304465478312141,0,0,0.23517741427141,0.125666591329675,0.247194967734374,0,2.65383165584962,0,0.883366073841574,0.969750506270444,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.497627882440372,0,0,0,0,0.180062129805349,0,0.204109497453984,0.12811372028485,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0.16455984991348,0,0.162137619091711,0,0.439100230582101,0.402619256281115,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0.123397163921801,0,0.166845105716094,0.786235980452812,0.674586337154561,0.202860121388503,0.482354319504834,0.763877555344259,0,12.8086829152278,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0.238043640886014,0.585400943573396,0.630540576424764,0,0.478364305972461,0.327726629431476,0.518054945597687,0.578596234326046,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0.329940245945071,2.65490276679926,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0,0,0,0,2.06271086496374,0,0,0.129358683782755,0,0,0.178368817602071,0.329098041204242,0.304464949114599,0.469343416127421,0.21183207086382,0,0,0.322928853391811,0.120625849856312,0,0,0.291480836629851,0,4.27177201994632,0.619160603889667,0.370389054739423,1.31857919903284,1.6403307326523,3.20289442489132,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0,0,0.247960367176008,0,0,0,7.89170114157866,0.897099276263873,0.165458490457098,0,0.258319646955462,0,0.234714477291508,0.39061315453185,0,0.483168241652012,1.44015003128933,0,0,0,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0,0,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.512200817262403,0.486213434136588,0.209613162627982,0.183843508450014,0,0,0,0,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0.282328141245992,0,0,0.263069711437843,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0.765153328275374,0,0 | |||
|short_description=p@chr3:100276521..100276540,- | |||
}} |
Revision as of 00:59, 14 September 2013
Short description: | p@chr3:100276521..100276540, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:100276521..100276540, - |
Coexpression cluster: | MCL_coexpression_mm9:261 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 8.39e-10 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 8.39e-10 | 3 |
Kit-positive megakaryocyte progenitor cell | 8.39e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.21e-18 | 6 |
cavity lining | 2.21e-18 | 6 |
serous membrane | 2.21e-18 | 6 |
gastrointestinal system mesentery | 2.21e-18 | 6 |
stomach region | 2.21e-18 | 6 |
mesentery | 2.21e-18 | 6 |
gastrointestinal system serosa | 2.21e-18 | 6 |
mesentery of stomach | 2.21e-18 | 6 |
gut mesentery | 2.21e-18 | 6 |
dorsal mesentery | 2.21e-18 | 6 |
dorsal mesogastrium | 2.21e-18 | 6 |
peritoneal cavity | 2.21e-18 | 6 |
spleen primordium | 2.21e-18 | 6 |
intraembryonic coelom | 7.07e-17 | 10 |
body cavity | 4.96e-14 | 37 |
body cavity or lining | 4.96e-14 | 37 |
body cavity precursor | 1.22e-13 | 38 |
anatomical cavity | 2.87e-13 | 39 |
viscus | 1.21e-12 | 19 |
seminal vesicle | 6.57e-08 | 1 |
vesicular gland | 6.57e-08 | 1 |
seminal fluid secreting gland | 6.57e-08 | 1 |
stomach | 4.69e-07 | 16 |
food storage organ | 4.69e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.