FFCP PHASE1:Hg19::chr7:47420433..47420449,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:47420433..47420449,-|id=chr7:47420433..47420449,-|ontology_enrichment_celltype=CL:0002150!2.87e-07!3;CL:0000861!2.87e-07!3|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3151;5.85e-14;1!DOID:3149;5.85e-14;1!DOID:3451;1.27e-07;2!DOID:4159;1.27e-07;2!DOID:0060122;1.27e-07;2!DOID:3493;1.27e-07;2|ontology_enrichment_disease_v019_2=DOID:3151,4.53e-14,1;DOID:3149,4.53e-14,1;DOID:3451,1.12e-07,2;DOID:4159,1.12e-07,2;DOID:0060122,1.12e-07,2;DOID:3493,1.45e-07,2|ontology_enrichment_uberon=UBERON:0007023!8.19e-15!115;UBERON:0001007!3.96e-09!155;UBERON:0001555!3.96e-09!155;UBERON:0007026!3.96e-09!155;UBERON:0000160!1.55e-08!27;UBERON:0000059!4.06e-08!11;UBERON:0004921!4.23e-08!129;UBERON:0004185!4.23e-08!129;UBERON:0004119!1.04e-07!169;UBERON:0000925!1.04e-07!169;UBERON:0006595!1.04e-07!169;UBERON:0005409!2.20e-07!35|ontology_enrichment_uberon_v019=UBERON:0000160;3.90e-17;17!UBERON:0002171;3.28e-14;1!UBERON:0006518;3.28e-14;1!UBERON:0008949;3.28e-14;1!UBERON:0000101;3.28e-14;1!UBERON:0002167;3.28e-14;1!UBERON:0005409;2.06e-13;22!UBERON:0001155;5.88e-13;9!UBERON:0004921;1.29e-11;33!UBERON:0002108;6.79e-11;4!UBERON:0000059;1.04e-10;11!UBERON:0001555;5.43e-07;54|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.77e-17,17;UBERON:0002171,3.08e-14,1;UBERON:0006518,3.08e-14,1;UBERON:0008949,3.08e-14,1;UBERON:0000101,3.08e-14,1;UBERON:0002167,3.08e-14,1;UBERON:0001155,4.79e-13,9;UBERON:0005409,7.17e-12,25;UBERON:0002108,8.29e-11,4;UBERON:0000059,8.83e-11,11;UBERON:0001007,6.95e-09,145;UBERON:0001555,6.95e-09,145;UBERON:0007026,6.95e-09,145;UBERON:0004119,6.37e-08,160;UBERON:0000925,6.37e-08,160;UBERON:0006595,6.37e-08,160;UBERON:0004921,2.21e-07,118|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68426486367398,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0.219385397153973,0,2.78847488557207,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,1.68069372556344,2.4441205797345,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,4.33899345837827,0.0979923974143777,0,0,0,0.290268993867255,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0,0.39961921916426,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.599037001496973,0,0,0.134366944973453,0,0,0,0.0824158583811665,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,2.68347750079413,0,0.734364233889974,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,1.17466153824464,0.943225830597996,4.55662960881915,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.332787154610557,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,2.35554524402461,0,0.917142992608395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0,0,0,0,0.0657727735628491,0.118193840883968,0,0.078493092850514,0,0.280272163313789,0.913158720509496,0,0,0,0,0,0,0,0,0.17071847709395,0,1.29068207646083,0,0,0.846774100381858,0,0,0,0.223710863595585,0,2.07260472469858,0,0,0,0.485710993059139,0,0.198950775161368,0,1.24240690242856,0,0,2.16087642702245,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.0679914901909147,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0.213233981900981,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:47420433..47420449,- | |||
|id=chr7:47420433..47420449,- | |||
|ontology_enrichment_celltype=CL:0002150!2.87e-07!3;CL:0000861!2.87e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;5.85e-14;1!DOID:3149;5.85e-14;1!DOID:3451;1.27e-07;2!DOID:4159;1.27e-07;2!DOID:0060122;1.27e-07;2!DOID:3493;1.27e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.53e-14,1;DOID:3149,4.53e-14,1;DOID:3451,1.12e-07,2;DOID:4159,1.12e-07,2;DOID:0060122,1.12e-07,2;DOID:3493,1.45e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.19e-15!115;UBERON:0001007!3.96e-09!155;UBERON:0001555!3.96e-09!155;UBERON:0007026!3.96e-09!155;UBERON:0000160!1.55e-08!27;UBERON:0000059!4.06e-08!11;UBERON:0004921!4.23e-08!129;UBERON:0004185!4.23e-08!129;UBERON:0004119!1.04e-07!169;UBERON:0000925!1.04e-07!169;UBERON:0006595!1.04e-07!169;UBERON:0005409!2.20e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.90e-17;17!UBERON:0002171;3.28e-14;1!UBERON:0006518;3.28e-14;1!UBERON:0008949;3.28e-14;1!UBERON:0000101;3.28e-14;1!UBERON:0002167;3.28e-14;1!UBERON:0005409;2.06e-13;22!UBERON:0001155;5.88e-13;9!UBERON:0004921;1.29e-11;33!UBERON:0002108;6.79e-11;4!UBERON:0000059;1.04e-10;11!UBERON:0001555;5.43e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.77e-17,17;UBERON:0002171,3.08e-14,1;UBERON:0006518,3.08e-14,1;UBERON:0008949,3.08e-14,1;UBERON:0000101,3.08e-14,1;UBERON:0002167,3.08e-14,1;UBERON:0001155,4.79e-13,9;UBERON:0005409,7.17e-12,25;UBERON:0002108,8.29e-11,4;UBERON:0000059,8.83e-11,11;UBERON:0001007,6.95e-09,145;UBERON:0001555,6.95e-09,145;UBERON:0007026,6.95e-09,145;UBERON:0004119,6.37e-08,160;UBERON:0000925,6.37e-08,160;UBERON:0006595,6.37e-08,160;UBERON:0004921,2.21e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68426486367398,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0.219385397153973,0,2.78847488557207,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,1.68069372556344,2.4441205797345,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,4.33899345837827,0.0979923974143777,0,0,0,0.290268993867255,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0,0.39961921916426,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.599037001496973,0,0,0.134366944973453,0,0,0,0.0824158583811665,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,2.68347750079413,0,0.734364233889974,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,1.17466153824464,0.943225830597996,4.55662960881915,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.332787154610557,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,2.35554524402461,0,0.917142992608395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0,0,0,0,0.0657727735628491,0.118193840883968,0,0.078493092850514,0,0.280272163313789,0.913158720509496,0,0,0,0,0,0,0,0,0.17071847709395,0,1.29068207646083,0,0,0.846774100381858,0,0,0,0.223710863595585,0,2.07260472469858,0,0,0,0.485710993059139,0,0.198950775161368,0,1.24240690242856,0,0,2.16087642702245,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.0679914901909147,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0.213233981900981,0.952257725854961,0,0,0,0.700118741059814,2.02117188958219,0.435433495793923,0,0.26940821205835,0.215166616178029,0.332660356546013,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr7:47420433..47420449,- | |||
}} |
Revision as of 01:27, 14 September 2013
Short description: | p@chr7:47420433..47420449, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:47420433..47420449, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 3.77e-17 | 17 |
lower lobe of right lung | 3.08e-14 | 1 |
right lung lobe | 3.08e-14 | 1 |
lower lobe of lung | 3.08e-14 | 1 |
lobe of lung | 3.08e-14 | 1 |
right lung | 3.08e-14 | 1 |
colon | 4.79e-13 | 9 |
gastrointestinal system | 7.17e-12 | 25 |
small intestine | 8.29e-11 | 4 |
large intestine | 8.83e-11 | 11 |
digestive system | 6.95e-09 | 145 |
digestive tract | 6.95e-09 | 145 |
primitive gut | 6.95e-09 | 145 |
endoderm-derived structure | 6.37e-08 | 160 |
endoderm | 6.37e-08 | 160 |
presumptive endoderm | 6.37e-08 | 160 |
subdivision of digestive tract | 2.21e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.53e-14 | 1 |
keratoacanthoma | 4.53e-14 | 1 |
skin carcinoma | 1.12e-07 | 2 |
skin cancer | 1.12e-07 | 2 |
integumentary system cancer | 1.12e-07 | 2 |
signet ring cell adenocarcinoma | 1.45e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.