FFCP PHASE1:Mm9::chr3:79688498..79688514,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=68659|HGNC=|UniProt=D3YXF7|association_with_transcript=-4bp_to_ENSMUST00000145992_5end|description=CAGE_peak_8_at_Fam198b_5end|id=chr3:79688498..79688514,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000680,7.92e-08,6;CL:0000187,7.92e-08,6;CL:0000056,7.92e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!1.94e-11!18;UBERON:0000948!1.94e-11!18;UBERON:0005498!1.94e-11!18;UBERON:0004140!1.94e-11!18;UBERON:0009881!1.94e-11!18;UBERON:0004141!1.94e-11!18;UBERON:0003084!1.94e-11!18;UBERON:0007005!1.94e-11!18;UBERON:0004139!1.94e-11!18;UBERON:0004291!1.94e-11!18;UBERON:0004535!1.99e-11!23;UBERON:0001009!1.99e-11!23;UBERON:0004872!5.50e-09!33;UBERON:0005157!2.73e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0004535,5.89e-17,23;UBERON:0001009,5.89e-17,23;UBERON:0007100,7.30e-17,18;UBERON:0000948,7.30e-17,18;UBERON:0005498,7.30e-17,18;UBERON:0004140,7.30e-17,18;UBERON:0009881,7.30e-17,18;UBERON:0004141,7.30e-17,18;UBERON:0003084,7.30e-17,18;UBERON:0007005,7.30e-17,18;UBERON:0004139,7.30e-17,18;UBERON:0004291,7.30e-17,18;UBERON:0004872,1.54e-11,33|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,2.54012269383853,4.30545351309199,15.8481681015439,0,0,0,0,0,0,0,0,0,1.1330713617802,1.21652317463417,1.28482726513177,0,0.65407546914134,0.878744730937887,0.972149495371417,0.139986421625363,0,0,0,0,21.0952737549477,4.29800159908135,5.67239301505187,0,0,0,1.35537812827653,0,0,0,0,1.79760066311043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589257170947335,0.284743361598206,0.186399445825301,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38140145112336,1.77351905832569,0.505524445014783,0,0,0.742210695324124,2.60227990149204,2.74018930480927,4.15107895060905,3.46662073271032,1.88141931417128,0.502666365318702,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0.910843100738926,0,1.62055916824814,0.452114453507145,0.612328492361951,0.2562274405697,0.655912071918102,0.258703370739016,0.215567992932842,0.378212160335639,0,0.657587197282725,0.556094498451196,0.348252166522167,0.61734640922383,1.99034266818493,0,0,0,3.31401236056803,3.04883877975425,3.6012412292203,4.7348947117042,4.72234156193769,3.70241070929708,5.11574678450897,6.43856163359086,4.08678698285093,3.62031669809657,1.64167464079095,0.56748166682099,0.584799949701329,1.75640092232841,0.134206418760372,0,0.102904612379284,0,0,0.639864751605702,0.464473343720877,0.644337306610467,0.403367049246685,0.889512175379481,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0,0,0.379335801906163,0.228497025219458,0,0.610953983535943,0.193952487167626,0.210407459670956,0,0,0,0,0,0.333690211432188,0.589676985339609,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,1.14075483509418,0.169745085775188,1.87752198630802,2.51259386162724,1.42826184531608,0.195133647857799,1.57635144106191,1.7717175171902,1.59454768657487,0.655453258862952,0.690739927463582,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0.504941854408746,0.94652465824877,1.56175497718655,0.861693590931196,1.67278158566786,0.445597348164788,0.849229592366497,2.02405350837447,4.67609372658099,1.58115111178609,0,0.567760340833074,0.890328018336276,0.81443479676788,0,0,0.242780636154981,0,0.754420319023592,0.295301892880773,0.614870295887855,0.258428293168221,1.45413491791002,0.356497378384721,0,0,0,0,0.18006109403131,0,0.857348140126369,0.177340233642274,0.535106452806212,0,0,0,0,0,0.32977250588296,1.13025098687134,0.72375509913787,0.596861720015682,0,0,0,0.170870880797853,0.82554747185289,2.22233432843654,0.941842285023455,0.136694227721025,0,0,0,0,0,0.632671987162271,0,0.324016022465404,0.627264888043406,0,0.134864346384821,0.165306911450672,0,0,0,0,3.58839710505549,1.98550188548517,1.75006069509643,1.93739735216597,2.36538575687089,0.938857909166032,1.0416350787516,0.629156066554265,0.483168241652012,0,0,0.608175645870493,0.410843828659309,0.129920822977795,0,0,0,0,0.201932899896295,0.15241361331,0.100826185136841,0,0,0,0,0,0.0897138566094757,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0,0.419226325255965,0.735374033800057,1.33348036680969,0.206035057238894,1.28367683836726,0.758091635291392,1.52087579934144,0.943131706930381,1.31098110457835,1.08842759088278,1.20614484806788,0.952587382566147,0.811190281613988,1.15745532278223,0.824171801606613,1.32479028120958,1.02860775715625,1.24233064311536,1.66905332963125,1.74415699958794,1.12931256498397,1.60767754994185,0.73171189149109,2.10455769150274,1.08643291076689,1.12228454331548,0.949080144993393,0.886540341380071,2.04615521584845,0.77468420592983,0.964533054905707,0.749431733813838,1.87145286756327,0.429742108096597,0.57386499620653,0.882365676478062,0.695603506861264|short_description=p8@Fam198b}} | ||
|EntrezGene=68659 | |||
|HGNC= | |||
|UniProt=D3YXF7 | |||
|association_with_transcript=-4bp_to_ENSMUST00000145992_5end | |||
|description=CAGE_peak_8_at_Fam198b_5end | |||
|id=chr3:79688498..79688514,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,7.92e-08,6;CL:0000187,7.92e-08,6;CL:0000056,7.92e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.94e-11!18;UBERON:0000948!1.94e-11!18;UBERON:0005498!1.94e-11!18;UBERON:0004140!1.94e-11!18;UBERON:0009881!1.94e-11!18;UBERON:0004141!1.94e-11!18;UBERON:0003084!1.94e-11!18;UBERON:0007005!1.94e-11!18;UBERON:0004139!1.94e-11!18;UBERON:0004291!1.94e-11!18;UBERON:0004535!1.99e-11!23;UBERON:0001009!1.99e-11!23;UBERON:0004872!5.50e-09!33;UBERON:0005157!2.73e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,5.89e-17,23;UBERON:0001009,5.89e-17,23;UBERON:0007100,7.30e-17,18;UBERON:0000948,7.30e-17,18;UBERON:0005498,7.30e-17,18;UBERON:0004140,7.30e-17,18;UBERON:0009881,7.30e-17,18;UBERON:0004141,7.30e-17,18;UBERON:0003084,7.30e-17,18;UBERON:0007005,7.30e-17,18;UBERON:0004139,7.30e-17,18;UBERON:0004291,7.30e-17,18;UBERON:0004872,1.54e-11,33 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,2.54012269383853,4.30545351309199,15.8481681015439,0,0,0,0,0,0,0,0,0,1.1330713617802,1.21652317463417,1.28482726513177,0,0.65407546914134,0.878744730937887,0.972149495371417,0.139986421625363,0,0,0,0,21.0952737549477,4.29800159908135,5.67239301505187,0,0,0,1.35537812827653,0,0,0,0,1.79760066311043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589257170947335,0.284743361598206,0.186399445825301,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38140145112336,1.77351905832569,0.505524445014783,0,0,0.742210695324124,2.60227990149204,2.74018930480927,4.15107895060905,3.46662073271032,1.88141931417128,0.502666365318702,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0.910843100738926,0,1.62055916824814,0.452114453507145,0.612328492361951,0.2562274405697,0.655912071918102,0.258703370739016,0.215567992932842,0.378212160335639,0,0.657587197282725,0.556094498451196,0.348252166522167,0.61734640922383,1.99034266818493,0,0,0,3.31401236056803,3.04883877975425,3.6012412292203,4.7348947117042,4.72234156193769,3.70241070929708,5.11574678450897,6.43856163359086,4.08678698285093,3.62031669809657,1.64167464079095,0.56748166682099,0.584799949701329,1.75640092232841,0.134206418760372,0,0.102904612379284,0,0,0.639864751605702,0.464473343720877,0.644337306610467,0.403367049246685,0.889512175379481,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0,0,0.379335801906163,0.228497025219458,0,0.610953983535943,0.193952487167626,0.210407459670956,0,0,0,0,0,0.333690211432188,0.589676985339609,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,1.14075483509418,0.169745085775188,1.87752198630802,2.51259386162724,1.42826184531608,0.195133647857799,1.57635144106191,1.7717175171902,1.59454768657487,0.655453258862952,0.690739927463582,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0.504941854408746,0.94652465824877,1.56175497718655,0.861693590931196,1.67278158566786,0.445597348164788,0.849229592366497,2.02405350837447,4.67609372658099,1.58115111178609,0,0.567760340833074,0.890328018336276,0.81443479676788,0,0,0.242780636154981,0,0.754420319023592,0.295301892880773,0.614870295887855,0.258428293168221,1.45413491791002,0.356497378384721,0,0,0,0,0.18006109403131,0,0.857348140126369,0.177340233642274,0.535106452806212,0,0,0,0,0,0.32977250588296,1.13025098687134,0.72375509913787,0.596861720015682,0,0,0,0.170870880797853,0.82554747185289,2.22233432843654,0.941842285023455,0.136694227721025,0,0,0,0,0,0.632671987162271,0,0.324016022465404,0.627264888043406,0,0.134864346384821,0.165306911450672,0,0,0,0,3.58839710505549,1.98550188548517,1.75006069509643,1.93739735216597,2.36538575687089,0.938857909166032,1.0416350787516,0.629156066554265,0.483168241652012,0,0,0.608175645870493,0.410843828659309,0.129920822977795,0,0,0,0,0.201932899896295,0.15241361331,0.100826185136841,0,0,0,0,0,0.0897138566094757,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0,0.419226325255965,0.735374033800057,1.33348036680969,0.206035057238894,1.28367683836726,0.758091635291392,1.52087579934144,0.943131706930381,1.31098110457835,1.08842759088278,1.20614484806788,0.952587382566147,0.811190281613988,1.15745532278223,0.824171801606613,1.32479028120958,1.02860775715625,1.24233064311536,1.66905332963125,1.74415699958794,1.12931256498397,1.60767754994185,0.73171189149109,2.10455769150274,1.08643291076689,1.12228454331548,0.949080144993393,0.886540341380071,2.04615521584845,0.77468420592983,0.964533054905707,0.749431733813838,1.87145286756327,0.429742108096597,0.57386499620653,0.882365676478062,0.695603506861264 | |||
|short_description=p8@Fam198b | |||
}} |
Revision as of 02:33, 14 September 2013
Short description: | p8@Fam198b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Fam198b_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENSMUST00000145992_5end |
EntrezGene: | Fam198b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 7.92e-08 | 6 |
muscle cell | 7.92e-08 | 6 |
myoblast | 7.92e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 5.89e-17 | 23 |
circulatory system | 5.89e-17 | 23 |
primary circulatory organ | 7.30e-17 | 18 |
heart | 7.30e-17 | 18 |
primitive heart tube | 7.30e-17 | 18 |
primary heart field | 7.30e-17 | 18 |
anterior lateral plate mesoderm | 7.30e-17 | 18 |
heart tube | 7.30e-17 | 18 |
heart primordium | 7.30e-17 | 18 |
cardiac mesoderm | 7.30e-17 | 18 |
cardiogenic plate | 7.30e-17 | 18 |
heart rudiment | 7.30e-17 | 18 |
splanchnic layer of lateral plate mesoderm | 1.54e-11 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.