FFCP PHASE1:Mm9::chr3:8964222..8964240,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=21985|HGNC=|MCL_coexpression_id=57|UniProt=F8WHQ1,Q62393|association_with_transcript=-168bp_to_NM_001025261,NM_001025262,uc008oor.1,uc008oos.1_5end|description=CAGE_peak_5_at_Tpd52_5end|id=chr3:8964222..8964240,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!7.59e-09!9;UBERON:0000019!7.59e-09!9;UBERON:0000047!7.59e-09!9;UBERON:0004088!7.59e-09!9;UBERON:0002104!7.59e-09!9;UBERON:0001456!7.59e-09!9;UBERON:0003072!7.59e-09!9;UBERON:0003071!7.59e-09!9;UBERON:0004128!7.59e-09!9;UBERON:0005085!8.00e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0007811,5.81e-19,36;UBERON:0000970,1.39e-17,9;UBERON:0000019,1.39e-17,9;UBERON:0000047,1.39e-17,9;UBERON:0010312,1.39e-17,9;UBERON:0004088,1.39e-17,9;UBERON:0002104,1.39e-17,9;UBERON:0001456,1.39e-17,9;UBERON:0003072,1.39e-17,9;UBERON:0004128,1.39e-17,9;UBERON:0003071,1.39e-17,9;UBERON:0000153,6.93e-15,43;UBERON:0001444,5.67e-14,11;UBERON:0000020,1.28e-12,12;UBERON:0001032,1.28e-12,12;UBERON:0004456,1.28e-12,12;UBERON:0000033,1.77e-11,13;UBERON:0005085,1.77e-11,13;UBERON:0002370,3.58e-09,23;UBERON:0000974,3.58e-09,23;UBERON:0004807,3.58e-09,23;UBERON:0005058,3.58e-09,23;UBERON:0003351,3.58e-09,23;UBERON:0009113,3.58e-09,23;UBERON:0003295,3.58e-09,23;UBERON:0009722,3.58e-09,23;UBERON:0005562,3.58e-09,23;UBERON:0007690,3.58e-09,23;UBERON:0006562,1.14e-08,24;UBERON:0003408,1.14e-08,24;UBERON:0001557,1.14e-08,24;UBERON:0001042,1.14e-08,24;UBERON:0008814,1.14e-08,24;UBERON:0009145,1.14e-08,24;UBERON:0003056,4.02e-08,49;UBERON:0000072,2.19e-07,27|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0.420649922702764,0.285650984403804,0,0.489963196859816,0.383381884072945,1.83843757322004,0,0,0,1.05509030184155,1.18933936683133,1.56274011167028,0,0,0,0.589257170947335,0.284743361598206,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0,0.117588707135705,0,2.22475470960936,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0.254140454146129,0,0,0.879580464790051,0,0,0,0,1.42575109390443,0.497627882440372,1.51633655060205,2.94618598241064,2.86264974517948,5.0578462975364,3.78130472591233,3.0140963567143,6.32739442107349,6.02134485338794,8.71426038405478,6.98499100995342,0.646703978798527,0.378212160335639,0,0,0,0.348252166522167,0,0.796137067273973,0.702213187313235,0,0,0,0,0.180062061461015,0.473489471170421,0.393528463494808,0.154267112887378,0,0,0.233530684734339,0,0,0,0,0,0,0,0.720332286654991,0.330418782983798,0,0.639864751605702,1.62565670302307,1.41754207454303,0,0.444756087689741,0,0,0.329397909448022,0.251335208800269,0.397912944082302,0,0,0,0,3.03468641524931,1.37098215131675,2.25415471346161,2.44381593414377,0.969762435838129,2.17421041659988,1.01178459398812,0.295220295959204,0.941992367048249,0.123397163921801,0,0,0,0.674586337154561,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0,1.32643988239339,2.28150967018836,0.678980343100753,0.469380496577004,0.837531287209079,0,0,0.157635144106191,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651547837414304,0,0,2.18502572539483,3.02323556964751,1.69744571780308,0.590603785761546,0.922305443831782,1.29214146584111,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,2.16073312837572,3.10460841078611,3.64372959553707,3.3694644392032,1.78368817602071,0.987294123612726,0.913394847343798,0.23467170806371,0.42366414172764,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,1.18984900995699,0.559805809294632,1.10559979043539,0,1.73984796469624,2.03319467126849,0.648032044930808,0.418176592028937,0.436725127492355,0,0.495920734352016,0,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0,0.129159823477731,0,0,0.39061315453185,0.524296722128554,0,0,1.26404448251271,1.62180172232131,1.74608627180206,1.81889152168913,1.07416017400489,0.596044064343795,2.76449533895928,1.03382669022204,1.61546319917036,1.98137697303,2.11734988787365,1.26695244961678,1.6356013078856,1.8700304349051,0,0,0.358855426437903,0.335769232728157,0.19318959403219,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0.341467211508268,0.486213434136588,0.209613162627982,0.183843508450014,0,0.206035057238894,0.320919209591815,0.505394423527595,0.25347929989024,0.565879024158229,0.280924522409647,0.0640251524048693,0.516919220600519,0,0.579421629724277,0,0,0,0.342869252385415,0.354951612318675,0,0,0.188218760830661,0.25384382367503,0.73171189149109,0.263069711437843,0.135804113845862,0,0.118635018124174,0.492522411877817,0.409231043169689,0.154936841185966,0.771626443924566,0.499621155875892,0,0,0,0,0|short_description=p5@Tpd52}} | ||
|EntrezGene=21985 | |||
|HGNC= | |||
|MCL_coexpression_id=57 | |||
|UniProt=F8WHQ1,Q62393 | |||
|association_with_transcript=-168bp_to_NM_001025261,NM_001025262,uc008oor.1,uc008oos.1_5end | |||
|description=CAGE_peak_5_at_Tpd52_5end | |||
|id=chr3:8964222..8964240,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!7.59e-09!9;UBERON:0000019!7.59e-09!9;UBERON:0000047!7.59e-09!9;UBERON:0004088!7.59e-09!9;UBERON:0002104!7.59e-09!9;UBERON:0001456!7.59e-09!9;UBERON:0003072!7.59e-09!9;UBERON:0003071!7.59e-09!9;UBERON:0004128!7.59e-09!9;UBERON:0005085!8.00e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007811,5.81e-19,36;UBERON:0000970,1.39e-17,9;UBERON:0000019,1.39e-17,9;UBERON:0000047,1.39e-17,9;UBERON:0010312,1.39e-17,9;UBERON:0004088,1.39e-17,9;UBERON:0002104,1.39e-17,9;UBERON:0001456,1.39e-17,9;UBERON:0003072,1.39e-17,9;UBERON:0004128,1.39e-17,9;UBERON:0003071,1.39e-17,9;UBERON:0000153,6.93e-15,43;UBERON:0001444,5.67e-14,11;UBERON:0000020,1.28e-12,12;UBERON:0001032,1.28e-12,12;UBERON:0004456,1.28e-12,12;UBERON:0000033,1.77e-11,13;UBERON:0005085,1.77e-11,13;UBERON:0002370,3.58e-09,23;UBERON:0000974,3.58e-09,23;UBERON:0004807,3.58e-09,23;UBERON:0005058,3.58e-09,23;UBERON:0003351,3.58e-09,23;UBERON:0009113,3.58e-09,23;UBERON:0003295,3.58e-09,23;UBERON:0009722,3.58e-09,23;UBERON:0005562,3.58e-09,23;UBERON:0007690,3.58e-09,23;UBERON:0006562,1.14e-08,24;UBERON:0003408,1.14e-08,24;UBERON:0001557,1.14e-08,24;UBERON:0001042,1.14e-08,24;UBERON:0008814,1.14e-08,24;UBERON:0009145,1.14e-08,24;UBERON:0003056,4.02e-08,49;UBERON:0000072,2.19e-07,27 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0.420649922702764,0.285650984403804,0,0.489963196859816,0.383381884072945,1.83843757322004,0,0,0,1.05509030184155,1.18933936683133,1.56274011167028,0,0,0,0.589257170947335,0.284743361598206,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0,0.117588707135705,0,2.22475470960936,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0.254140454146129,0,0,0.879580464790051,0,0,0,0,1.42575109390443,0.497627882440372,1.51633655060205,2.94618598241064,2.86264974517948,5.0578462975364,3.78130472591233,3.0140963567143,6.32739442107349,6.02134485338794,8.71426038405478,6.98499100995342,0.646703978798527,0.378212160335639,0,0,0,0.348252166522167,0,0.796137067273973,0.702213187313235,0,0,0,0,0.180062061461015,0.473489471170421,0.393528463494808,0.154267112887378,0,0,0.233530684734339,0,0,0,0,0,0,0,0.720332286654991,0.330418782983798,0,0.639864751605702,1.62565670302307,1.41754207454303,0,0.444756087689741,0,0,0.329397909448022,0.251335208800269,0.397912944082302,0,0,0,0,3.03468641524931,1.37098215131675,2.25415471346161,2.44381593414377,0.969762435838129,2.17421041659988,1.01178459398812,0.295220295959204,0.941992367048249,0.123397163921801,0,0,0,0.674586337154561,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0,1.32643988239339,2.28150967018836,0.678980343100753,0.469380496577004,0.837531287209079,0,0,0.157635144106191,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651547837414304,0,0,2.18502572539483,3.02323556964751,1.69744571780308,0.590603785761546,0.922305443831782,1.29214146584111,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,2.16073312837572,3.10460841078611,3.64372959553707,3.3694644392032,1.78368817602071,0.987294123612726,0.913394847343798,0.23467170806371,0.42366414172764,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,1.18984900995699,0.559805809294632,1.10559979043539,0,1.73984796469624,2.03319467126849,0.648032044930808,0.418176592028937,0.436725127492355,0,0.495920734352016,0,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0,0.129159823477731,0,0,0.39061315453185,0.524296722128554,0,0,1.26404448251271,1.62180172232131,1.74608627180206,1.81889152168913,1.07416017400489,0.596044064343795,2.76449533895928,1.03382669022204,1.61546319917036,1.98137697303,2.11734988787365,1.26695244961678,1.6356013078856,1.8700304349051,0,0,0.358855426437903,0.335769232728157,0.19318959403219,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0.341467211508268,0.486213434136588,0.209613162627982,0.183843508450014,0,0.206035057238894,0.320919209591815,0.505394423527595,0.25347929989024,0.565879024158229,0.280924522409647,0.0640251524048693,0.516919220600519,0,0.579421629724277,0,0,0,0.342869252385415,0.354951612318675,0,0,0.188218760830661,0.25384382367503,0.73171189149109,0.263069711437843,0.135804113845862,0,0.118635018124174,0.492522411877817,0.409231043169689,0.154936841185966,0.771626443924566,0.499621155875892,0,0,0,0,0 | |||
|short_description=p5@Tpd52 | |||
}} |
Revision as of 02:52, 14 September 2013
Short description: | p5@Tpd52 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Tpd52_5end |
Coexpression cluster: | MCL_coexpression_mm9:57 |
Association with transcript: | -168bp_to_NM_001025261, NM_001025262, uc008oor.1, uc008oos.1_5end |
EntrezGene: | Tpd52 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
craniocervical region | 5.81e-19 | 36 |
eye | 1.39e-17 | 9 |
camera-type eye | 1.39e-17 | 9 |
simple eye | 1.39e-17 | 9 |
immature eye | 1.39e-17 | 9 |
ocular region | 1.39e-17 | 9 |
visual system | 1.39e-17 | 9 |
face | 1.39e-17 | 9 |
optic cup | 1.39e-17 | 9 |
optic vesicle | 1.39e-17 | 9 |
eye primordium | 1.39e-17 | 9 |
anterior region of body | 6.93e-15 | 43 |
subdivision of head | 5.67e-14 | 11 |
sense organ | 1.28e-12 | 12 |
sensory system | 1.28e-12 | 12 |
entire sense organ system | 1.28e-12 | 12 |
head | 1.77e-11 | 13 |
ectodermal placode | 1.77e-11 | 13 |
thymus | 3.58e-09 | 23 |
neck | 3.58e-09 | 23 |
respiratory system epithelium | 3.58e-09 | 23 |
hemolymphoid system gland | 3.58e-09 | 23 |
pharyngeal epithelium | 3.58e-09 | 23 |
thymic region | 3.58e-09 | 23 |
pharyngeal gland | 3.58e-09 | 23 |
entire pharyngeal arch endoderm | 3.58e-09 | 23 |
thymus primordium | 3.58e-09 | 23 |
early pharyngeal endoderm | 3.58e-09 | 23 |
pharynx | 1.14e-08 | 24 |
gland of gut | 1.14e-08 | 24 |
upper respiratory tract | 1.14e-08 | 24 |
chordate pharynx | 1.14e-08 | 24 |
pharyngeal arch system | 1.14e-08 | 24 |
pharyngeal region of foregut | 1.14e-08 | 24 |
pre-chordal neural plate | 4.02e-08 | 49 |
segment of respiratory tract | 2.19e-07 | 27 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.