FFCP PHASE1:Mm9::chr4:129124210..129124215,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|UniProt=|association_with_transcript=0bp_to_uc008uxa.1_5end|description=CAGE_peak_1_at_uc008uxa.1_5end|id=chr4:129124210..129124215,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002494,2.77e-12,3;CL:0000737,2.77e-12,3;CL:0000746,2.77e-12,3;CL:0000513,2.77e-12,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!2.09e-09!18;UBERON:0000948!2.09e-09!18;UBERON:0005498!2.09e-09!18;UBERON:0004140!2.09e-09!18;UBERON:0009881!2.09e-09!18;UBERON:0004141!2.09e-09!18;UBERON:0003084!2.09e-09!18;UBERON:0007005!2.09e-09!18;UBERON:0004139!2.09e-09!18;UBERON:0004291!2.09e-09!18;UBERON:0005156!1.09e-08!26;UBERON:0000990!1.09e-08!26;UBERON:0003133!1.21e-08!24;UBERON:0000970!6.61e-08!9;UBERON:0000019!6.61e-08!9;UBERON:0000047!6.61e-08!9;UBERON:0004088!6.61e-08!9;UBERON:0002104!6.61e-08!9;UBERON:0001456!6.61e-08!9;UBERON:0003072!6.61e-08!9;UBERON:0003071!6.61e-08!9;UBERON:0004128!6.61e-08!9;UBERON:0001048!1.53e-07!147;UBERON:0004872!3.49e-07!33;UBERON:0004176!3.94e-07!17;UBERON:0009196!3.94e-07!17;UBERON:0009117!3.94e-07!17;UBERON:0003134!5.59e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0004871,8.30e-13,3;UBERON:0000305,2.48e-10,1;UBERON:0006834,3.74e-10,1;UBERON:0007100,4.55e-08,18;UBERON:0000948,4.55e-08,18;UBERON:0005498,4.55e-08,18;UBERON:0004140,4.55e-08,18;UBERON:0009881,4.55e-08,18;UBERON:0004141,4.55e-08,18;UBERON:0003084,4.55e-08,18;UBERON:0007005,4.55e-08,18;UBERON:0004139,4.55e-08,18;UBERON:0004291,4.55e-08,18|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02903774414379,0.573066879877513,1.03134418455488,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.867426633830679,0.608930956624282,0.230615497256059,0.150722640552623,0.470354828542819,0,1.48316980640624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12023300235348,0,0,0,0.260240885925407,0.919608417733892,0.540186389416048,0.60281927134286,2.17716797284249,0.2562274405697,1.03071897015702,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0.621377317606506,0,0.900310307305074,0.23674473558521,0.590292695242212,0.462801338662135,0.697601834251224,1.07309360559848,1.86824547787471,0.493679549740441,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.581857461502877,0.420814919341911,0.189709611372772,0,0.156998727841375,0,0,0,0,0.224862112384854,0.405720242777006,0.241177159752417,0.50925170356284,0.863088412352432,0.162135226775035,0.274561413188081,0,0,0,0,0.179397413521912,0,0,0,0.162964976442026,0,0.469380496577004,0.335012514883631,1.19021820443007,0.585400943573396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0.35613120733451,0.488660878060728,0,0,0,0,0.188605079755898,0,0.614870295887855,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0,0,0.704015124191131,0.847328283455281,0.220528398054962,0,0,0,0,0,0,0,0,0.619160603889667,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0.516639293910924,0.337912250981556,0.234714477291508,0.39061315453185,0,0.241584120826006,0.864090018773596,0,0,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,1.12609485270709,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.320125762024346,0.114870937911227,0,0,0.192909220463705,0.412085900803307,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0.271608227691724,0,0,0.29551344712669,0,0.309873682371932,0,0,0,0,0.191288332068843,0,0|short_description=p1@uc008uxa.1}} | ||
|EntrezGene= | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc008uxa.1_5end | |||
|description=CAGE_peak_1_at_uc008uxa.1_5end | |||
|id=chr4:129124210..129124215,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,2.77e-12,3;CL:0000737,2.77e-12,3;CL:0000746,2.77e-12,3;CL:0000513,2.77e-12,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!2.09e-09!18;UBERON:0000948!2.09e-09!18;UBERON:0005498!2.09e-09!18;UBERON:0004140!2.09e-09!18;UBERON:0009881!2.09e-09!18;UBERON:0004141!2.09e-09!18;UBERON:0003084!2.09e-09!18;UBERON:0007005!2.09e-09!18;UBERON:0004139!2.09e-09!18;UBERON:0004291!2.09e-09!18;UBERON:0005156!1.09e-08!26;UBERON:0000990!1.09e-08!26;UBERON:0003133!1.21e-08!24;UBERON:0000970!6.61e-08!9;UBERON:0000019!6.61e-08!9;UBERON:0000047!6.61e-08!9;UBERON:0004088!6.61e-08!9;UBERON:0002104!6.61e-08!9;UBERON:0001456!6.61e-08!9;UBERON:0003072!6.61e-08!9;UBERON:0003071!6.61e-08!9;UBERON:0004128!6.61e-08!9;UBERON:0001048!1.53e-07!147;UBERON:0004872!3.49e-07!33;UBERON:0004176!3.94e-07!17;UBERON:0009196!3.94e-07!17;UBERON:0009117!3.94e-07!17;UBERON:0003134!5.59e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004871,8.30e-13,3;UBERON:0000305,2.48e-10,1;UBERON:0006834,3.74e-10,1;UBERON:0007100,4.55e-08,18;UBERON:0000948,4.55e-08,18;UBERON:0005498,4.55e-08,18;UBERON:0004140,4.55e-08,18;UBERON:0009881,4.55e-08,18;UBERON:0004141,4.55e-08,18;UBERON:0003084,4.55e-08,18;UBERON:0007005,4.55e-08,18;UBERON:0004139,4.55e-08,18;UBERON:0004291,4.55e-08,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02903774414379,0.573066879877513,1.03134418455488,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.867426633830679,0.608930956624282,0.230615497256059,0.150722640552623,0.470354828542819,0,1.48316980640624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12023300235348,0,0,0,0.260240885925407,0.919608417733892,0.540186389416048,0.60281927134286,2.17716797284249,0.2562274405697,1.03071897015702,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0.621377317606506,0,0.900310307305074,0.23674473558521,0.590292695242212,0.462801338662135,0.697601834251224,1.07309360559848,1.86824547787471,0.493679549740441,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.581857461502877,0.420814919341911,0.189709611372772,0,0.156998727841375,0,0,0,0,0.224862112384854,0.405720242777006,0.241177159752417,0.50925170356284,0.863088412352432,0.162135226775035,0.274561413188081,0,0,0,0,0.179397413521912,0,0,0,0.162964976442026,0,0.469380496577004,0.335012514883631,1.19021820443007,0.585400943573396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0.35613120733451,0.488660878060728,0,0,0,0,0.188605079755898,0,0.614870295887855,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0,0,0.704015124191131,0.847328283455281,0.220528398054962,0,0,0,0,0,0,0,0,0.619160603889667,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0.516639293910924,0.337912250981556,0.234714477291508,0.39061315453185,0,0.241584120826006,0.864090018773596,0,0,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,1.12609485270709,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.320125762024346,0.114870937911227,0,0,0.192909220463705,0.412085900803307,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0.271608227691724,0,0,0.29551344712669,0,0.309873682371932,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p1@uc008uxa.1 | |||
}} |
Revision as of 03:51, 14 September 2013
Short description: | p1@uc008uxa.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc008uxa.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc008uxa.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 2.77e-12 | 3 |
striated muscle cell | 2.77e-12 | 3 |
cardiac muscle cell | 2.77e-12 | 3 |
cardiac muscle myoblast | 2.77e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
somatic layer of lateral plate mesoderm | 8.30e-13 | 3 |
amnion | 2.48e-10 | 1 |
uterus or analog | 3.74e-10 | 1 |
primary circulatory organ | 4.55e-08 | 18 |
heart | 4.55e-08 | 18 |
primitive heart tube | 4.55e-08 | 18 |
primary heart field | 4.55e-08 | 18 |
anterior lateral plate mesoderm | 4.55e-08 | 18 |
heart tube | 4.55e-08 | 18 |
heart primordium | 4.55e-08 | 18 |
cardiac mesoderm | 4.55e-08 | 18 |
cardiogenic plate | 4.55e-08 | 18 |
heart rudiment | 4.55e-08 | 18 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.