FFCP PHASE1:Hg19::chr8:42397129..42397144,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=114926|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25166|TSSclassifier=W|UniProt=Q96E16|association_with_transcript=190bp_to_NM_001135675,uc010lxo.2_5end|coexpression_cluster_id=C1|description=CAGE_peak_11_at_C8orf40_5end|id=chr8:42397129..42397144,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002363;9.86e-18;2|ontology_enrichment_celltype_v019_2=CL:0002363,1.27e-17,2;CL:0000008,1.27e-17,2|ontology_enrichment_development_v019=CL:0000008;9.86e-18;2!UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!8.82e-10!115|ontology_enrichment_uberon_v019=UBERON:0003566;9.86e-18;2!UBERON:0001777;9.86e-18;2!UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0003891;1.50e-09;4!UBERON:0000964;1.50e-09;4!UBERON:0010409;1.50e-09;4!UBERON:0002021;6.78e-08;5!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.22e-17,8;UBERON:0003566,1.27e-17,2;UBERON:0001777,1.27e-17,2;UBERON:0003135,4.00e-13,11;UBERON:0003891,1.70e-09,4;UBERON:0000964,1.70e-09,4;UBERON:0010409,1.70e-09,4;UBERON:0004348,1.70e-09,4;UBERON:0005427,1.70e-09,4;UBERON:0002021,6.55e-08,5;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0,0.0821005894499457,0,0.393364276848904,0,0,0,0.30120591877825,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0.145398238779565,0,0.485168122375632,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0.128091319725675,0.260118695119756,0,0.276350017785848,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0,0,0,1.76821751921912,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0,0,0.70296429550139,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,1.03993478527958,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0.297262324577456,0,0.16798212819886,0,0.179117045405697,0.290633938513962,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0.205654985406647,0,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0.336255431980582,0.394061520403854,0,0.256686072559497,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0.0920809889358963,0,0,0.262248829918848,0.451199612907412,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0.764637207142375,0.569647187174163,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0.0874599999961957,0,0,0,0.236387681767936,0,0,0.173624994933292,0.885741385813839,0.120596438625408,0,0,0,0,0.10893846351899,0,0.153900517007594,0.113942055847001,0,0.0897576444097721,0,0,0,0,0,0,0.166211681900156,0.225595660617181,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0.485560759068186,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.34945333648406,0,0,0.0730893170861856,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0,0.288109595976299,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.558564802544508,0,0,0.199679000498991,0.429226048136571,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0.0984274815147488,0.0846733320657845,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0.340776043570843,0,0,0,0.129282956361551,0,0,0,0.213574825135389,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0.612691153526923,0,0,0,0.2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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=114926 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25166 | |||
|TSSclassifier=W | |||
|UniProt=Q96E16 | |||
|association_with_transcript=190bp_to_NM_001135675,uc010lxo.2_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_11_at_C8orf40_5end | |||
|id=chr8:42397129..42397144,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002363;9.86e-18;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,1.27e-17,2;CL:0000008,1.27e-17,2 | |||
|ontology_enrichment_development_v019=CL:0000008;9.86e-18;2!UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.82e-10!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003566;9.86e-18;2!UBERON:0001777;9.86e-18;2!UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0003891;1.50e-09;4!UBERON:0000964;1.50e-09;4!UBERON:0010409;1.50e-09;4!UBERON:0002021;6.78e-08;5!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.22e-17,8;UBERON:0003566,1.27e-17,2;UBERON:0001777,1.27e-17,2;UBERON:0003135,4.00e-13,11;UBERON:0003891,1.70e-09,4;UBERON:0000964,1.70e-09,4;UBERON:0010409,1.70e-09,4;UBERON:0004348,1.70e-09,4;UBERON:0005427,1.70e-09,4;UBERON:0002021,6.55e-08,5;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22 | |||
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|short_description=p11@C8orf40 | |||
}} |
Revision as of 05:22, 14 September 2013
Short description: | p11@C8orf40 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_C8orf40_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 190bp_to_NM_001135675, uc010lxo.2_5end |
EntrezGene: | C8orf40 |
HGNC: | 25166 |
UniProt: | Q96E16 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 1.27e-17 | 2 |
migratory cranial neural crest cell | 1.27e-17 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 1.22e-17 | 8 |
head connective tissue | 1.27e-17 | 2 |
substantia propria of cornea | 1.27e-17 | 2 |
male reproductive organ | 4.00e-13 | 11 |
stroma | 1.70e-09 | 4 |
cornea | 1.70e-09 | 4 |
eye surface | 1.70e-09 | 4 |
optic eminence | 1.70e-09 | 4 |
corneal primordium | 1.70e-09 | 4 |
occipital lobe | 6.55e-08 | 5 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.