FFCP PHASE1:Hg19::chr8:73025996..73026000,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:73025996..73026000,+|id=chr8:73025996..73026000,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000511;8.60e-12;1!CL:0002625;8.60e-12;1!CL:0000216;8.60e-12;1!CL:0002581;2.67e-11;1|ontology_enrichment_celltype_v019_2=CL:0000511,8.62e-12,1;CL:0002625,8.62e-12,1;CL:0000216,8.62e-12,1;CL:0002581,1.60e-11,1|ontology_enrichment_development_v019=UBERON:0004874;1.01e-11;1!UBERON:0005062;6.63e-11;4!UBERON:0007284;6.63e-11;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4960;2.67e-11;1!DOID:0070004;2.67e-11;1|ontology_enrichment_disease_v019_2=DOID:4960,1.31e-11,1;DOID:0070004,1.31e-11,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0003978;3.16e-14;3!UBERON:0000946;3.16e-14;3!UBERON:0001136;8.60e-12;1!UBERON:0001343;8.60e-12;1!UBERON:0004910;8.60e-12;1!UBERON:0004813;8.60e-12;1!UBERON:0000989;1.01e-11;1!UBERON:0008811;1.01e-11;1!UBERON:0002146;2.67e-11;1!UBERON:0002134;2.67e-11;1!UBERON:0005208;2.67e-11;1!UBERON:0005623;2.67e-11;1!UBERON:0004145;2.67e-11;1!UBERON:0005946;2.67e-11;1!UBERON:0005965;2.67e-11;1!UBERON:0002078;2.67e-11;1|ontology_enrichment_uberon_v019_2=UBERON:0003978,2.26e-14,3;UBERON:0009751,2.26e-14,3;UBERON:0000946,2.26e-14,3;UBERON:0002523,2.26e-14,3;UBERON:0005983,2.26e-14,3;UBERON:0002165,2.26e-14,3;UBERON:0002062,2.26e-14,3;UBERON:0007280,2.26e-14,3;UBERON:0001136,8.62e-12,1;UBERON:0001343,8.62e-12,1;UBERON:0004910,8.62e-12,1;UBERON:0005154,8.62e-12,1;UBERON:0005295,8.62e-12,1;UBERON:0004813,8.62e-12,1;UBERON:0005297,8.62e-12,1;UBERON:0005294,8.62e-12,1;UBERON:0010141,8.62e-12,1;UBERON:0005891,8.62e-12,1;UBERON:0000989,9.57e-12,1;UBERON:0008811,9.57e-12,1;UBERON:0006258,9.57e-12,1;UBERON:0005876,9.57e-12,1;UBERON:0004874,9.57e-12,1;UBERON:0002134,1.97e-11,1;UBERON:0005208,1.97e-11,1;UBERON:0005946,1.97e-11,1;UBERON:0005965,1.97e-11,1;UBERON:0002078,1.97e-11,1;UBERON:0002146,2.18e-11,1;UBERON:0005623,2.18e-11,1|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0.382067028739756,0.821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,1.24930726552346,0.236777252044017,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0.0654895377488563,0,0,0,0.870648686496336,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860509862246441,0.354668382198357,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0.408308342509787,0.245668634623536,0.103325781175765,0,0.741800787835671,0,0,0.168336113954066,0.125118519871964,0,0,0,0.300476117813194,0.113432183160021,0,0,0,0,0.103052529238439,0.515281080091258,0,0.168776332241266,0.194874010322397,0.252433774244115,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,1.0404181360211,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0,0.410952645100767,0.179060963239896,0.224170287987055,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,1.03985430765404,0.535286966391485,0.473107245101804,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0,0,0,3.21367859688319,0.193341436584244,0,0,0.137836572484531,0.322260734604821,0.435050081742686,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0.143124886741991,0,0.949138274156178,0,0,0,0,0,0.359744915166629,0,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.191505370132367,0.635020748171649,0,0,0,0,0,0.338583555603207,0,0,0.425846237690326,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0.445234820091624,0,0,0.996239941255349,0,0,0.613612095012929,0.123084805461069,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0.797594390929008,0,0,0.108647371922008,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0.593042257361244,0.123563938946503,0.104421949505455,0,0.802577647298789,0,0,0.19566461893209,0,0,0,0,0.31593289814244,0,0,0.664653872707185,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0.0969890164884194,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:73025996..73026000,+ | |||
|id=chr8:73025996..73026000,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;8.60e-12;1!CL:0002625;8.60e-12;1!CL:0000216;8.60e-12;1!CL:0002581;2.67e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,8.62e-12,1;CL:0002625,8.62e-12,1;CL:0000216,8.62e-12,1;CL:0002581,1.60e-11,1 | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.01e-11;1!UBERON:0005062;6.63e-11;4!UBERON:0007284;6.63e-11;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;2.67e-11;1!DOID:0070004;2.67e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.31e-11,1;DOID:0070004,1.31e-11,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;3.16e-14;3!UBERON:0000946;3.16e-14;3!UBERON:0001136;8.60e-12;1!UBERON:0001343;8.60e-12;1!UBERON:0004910;8.60e-12;1!UBERON:0004813;8.60e-12;1!UBERON:0000989;1.01e-11;1!UBERON:0008811;1.01e-11;1!UBERON:0002146;2.67e-11;1!UBERON:0002134;2.67e-11;1!UBERON:0005208;2.67e-11;1!UBERON:0005623;2.67e-11;1!UBERON:0004145;2.67e-11;1!UBERON:0005946;2.67e-11;1!UBERON:0005965;2.67e-11;1!UBERON:0002078;2.67e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,2.26e-14,3;UBERON:0009751,2.26e-14,3;UBERON:0000946,2.26e-14,3;UBERON:0002523,2.26e-14,3;UBERON:0005983,2.26e-14,3;UBERON:0002165,2.26e-14,3;UBERON:0002062,2.26e-14,3;UBERON:0007280,2.26e-14,3;UBERON:0001136,8.62e-12,1;UBERON:0001343,8.62e-12,1;UBERON:0004910,8.62e-12,1;UBERON:0005154,8.62e-12,1;UBERON:0005295,8.62e-12,1;UBERON:0004813,8.62e-12,1;UBERON:0005297,8.62e-12,1;UBERON:0005294,8.62e-12,1;UBERON:0010141,8.62e-12,1;UBERON:0005891,8.62e-12,1;UBERON:0000989,9.57e-12,1;UBERON:0008811,9.57e-12,1;UBERON:0006258,9.57e-12,1;UBERON:0005876,9.57e-12,1;UBERON:0004874,9.57e-12,1;UBERON:0002134,1.97e-11,1;UBERON:0005208,1.97e-11,1;UBERON:0005946,1.97e-11,1;UBERON:0005965,1.97e-11,1;UBERON:0002078,1.97e-11,1;UBERON:0002146,2.18e-11,1;UBERON:0005623,2.18e-11,1 | |||
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| |||
|short_description=p@chr8:73025996..73026000,+ | |||
}} |
Revision as of 06:00, 14 September 2013
Short description: | p@chr8:73025996..73026000, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:73025996..73026000, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 8.62e-12 | 1 |
seminiferous tubule epithelial cell | 8.62e-12 | 1 |
Sertoli cell | 8.62e-12 | 1 |
perirenal preadipocyte | 1.60e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
valve | 2.26e-14 | 3 |
cardiac mesenchyme | 2.26e-14 | 3 |
cardial valve | 2.26e-14 | 3 |
tunica intima | 2.26e-14 | 3 |
heart layer | 2.26e-14 | 3 |
endocardium | 2.26e-14 | 3 |
endocardial cushion | 2.26e-14 | 3 |
presumptive endocardium | 2.26e-14 | 3 |
mesothelium | 8.62e-12 | 1 |
seminiferous tubule of testis | 8.62e-12 | 1 |
epithelium of male gonad | 8.62e-12 | 1 |
epithelial cord | 8.62e-12 | 1 |
sex cord | 8.62e-12 | 1 |
seminiferous tubule epithelium | 8.62e-12 | 1 |
testis sex cord | 8.62e-12 | 1 |
genital ridge | 8.62e-12 | 1 |
primitive sex cord of indifferent gonad | 8.62e-12 | 1 |
coelomic epithelium | 8.62e-12 | 1 |
penis | 9.57e-12 | 1 |
intromittent organ | 9.57e-12 | 1 |
lateral plate mesenchyme | 9.57e-12 | 1 |
undifferentiated genital tubercle | 9.57e-12 | 1 |
somatopleure | 9.57e-12 | 1 |
tricuspid valve | 1.97e-11 | 1 |
right atrium valve | 1.97e-11 | 1 |
outflow tract of atrium | 1.97e-11 | 1 |
outflow part of right atrium | 1.97e-11 | 1 |
right cardiac atrium | 1.97e-11 | 1 |
pulmonary valve | 2.18e-11 | 1 |
semi-lunar valve | 2.18e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.31e-11 | 1 |
myeloma | 1.31e-11 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.