FFCP PHASE1:Hg19::chr9:113054521..113054531,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C81|description=CAGE_peak_at_chr9:113054521..113054531,+|id=chr9:113054521..113054531,+|ontology_enrichment_celltype=CL:0002251!2.60e-12!21;CL:0002150!1.86e-10!3;CL:0000861!1.86e-10!3;CL:0002076!5.42e-10!43;CL:0000223!7.27e-09!59|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1749!6.95e-25!14;DOID:305!8.13e-15!106;DOID:0050687!1.00e-11!143;DOID:4362!4.79e-07!5;DOID:162!8.62e-07!235|ontology_enrichment_disease_v019=DOID:4362;3.10e-09;5|ontology_enrichment_disease_v019_2=DOID:4362,2.97e-09,5|ontology_enrichment_uberon=UBERON:0003343!9.36e-30!4;UBERON:0004785!9.36e-30!4;UBERON:0003729!7.21e-24!5;UBERON:0000974!1.61e-18!10;UBERON:0003127!2.35e-16!2;UBERON:0000344!3.55e-15!12;UBERON:0001004!1.24e-12!72;UBERON:0000166!4.14e-12!21;UBERON:0006562!6.86e-11!11;UBERON:0001723!9.82e-11!3;UBERON:0001033!9.82e-11!3;UBERON:0010056!9.82e-11!3;UBERON:0003126!1.91e-10!7;UBERON:0001005!1.91e-10!7;UBERON:0000065!6.01e-10!53;UBERON:0001557!1.77e-09!19;UBERON:0000072!2.97e-09!46;UBERON:0000165!5.84e-09!28;UBERON:0000930!5.84e-09!28;UBERON:0000997!1.32e-08!1;UBERON:0005056!1.32e-08!1;UBERON:0002372!1.65e-08!1;UBERON:0001961!1.65e-08!1;UBERON:0001744!1.65e-08!1;UBERON:0001735!1.65e-08!1;UBERON:0006834!1.78e-08!1;UBERON:0004119!3.57e-08!169;UBERON:0000925!3.57e-08!169;UBERON:0006595!3.57e-08!169;UBERON:0001007!6.34e-08!155;UBERON:0001555!6.34e-08!155;UBERON:0007026!6.34e-08!155;UBERON:0001042!4.32e-07!10;UBERON:0009145!4.32e-07!10;UBERON:0000161!4.57e-07!35|ontology_enrichment_uberon_v019=UBERON:0000974;3.11e-27;6!UBERON:0003127;3.11e-21;2!UBERON:0000341;5.15e-21;2!UBERON:0003343;3.26e-11;4!UBERON:0004785;3.26e-11;4!UBERON:0000002;6.55e-08;6!UBERON:0001560;6.55e-08;6!UBERON:0003126;5.08e-07;7!UBERON:0001005;5.08e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0003127,3.11e-21,2;UBERON:0000341,6.96e-21,2;UBERON:0000974,9.54e-17,10;UBERON:0003343,3.42e-11,4;UBERON:0004785,3.42e-11,4;UBERON:0000002,6.34e-08,6;UBERON:0001560,6.34e-08,6;UBERON:0003126,5.08e-07,7;UBERON:0001005,5.08e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,1.39423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.34823682632161,0,0,0.0967563312890851,0.146178634172371,0,0,0,0,0,0,0,0.391102765469606,0,0,0.39961921916426,0,0,0,0,0,1.41416420770077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.235939446695481,1.28400018965175,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27940389140589,0,0,0,0,0,0,0.217716747896961,0,0.134704106029175,2.94061042109973,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0|short_description=p@chr9:113054521..113054531,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C81 | |||
|description=CAGE_peak_at_chr9:113054521..113054531,+ | |||
|id=chr9:113054521..113054531,+ | |||
|ontology_enrichment_celltype=CL:0002251!2.60e-12!21;CL:0002150!1.86e-10!3;CL:0000861!1.86e-10!3;CL:0002076!5.42e-10!43;CL:0000223!7.27e-09!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!6.95e-25!14;DOID:305!8.13e-15!106;DOID:0050687!1.00e-11!143;DOID:4362!4.79e-07!5;DOID:162!8.62e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:4362;3.10e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,2.97e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0003343!9.36e-30!4;UBERON:0004785!9.36e-30!4;UBERON:0003729!7.21e-24!5;UBERON:0000974!1.61e-18!10;UBERON:0003127!2.35e-16!2;UBERON:0000344!3.55e-15!12;UBERON:0001004!1.24e-12!72;UBERON:0000166!4.14e-12!21;UBERON:0006562!6.86e-11!11;UBERON:0001723!9.82e-11!3;UBERON:0001033!9.82e-11!3;UBERON:0010056!9.82e-11!3;UBERON:0003126!1.91e-10!7;UBERON:0001005!1.91e-10!7;UBERON:0000065!6.01e-10!53;UBERON:0001557!1.77e-09!19;UBERON:0000072!2.97e-09!46;UBERON:0000165!5.84e-09!28;UBERON:0000930!5.84e-09!28;UBERON:0000997!1.32e-08!1;UBERON:0005056!1.32e-08!1;UBERON:0002372!1.65e-08!1;UBERON:0001961!1.65e-08!1;UBERON:0001744!1.65e-08!1;UBERON:0001735!1.65e-08!1;UBERON:0006834!1.78e-08!1;UBERON:0004119!3.57e-08!169;UBERON:0000925!3.57e-08!169;UBERON:0006595!3.57e-08!169;UBERON:0001007!6.34e-08!155;UBERON:0001555!6.34e-08!155;UBERON:0007026!6.34e-08!155;UBERON:0001042!4.32e-07!10;UBERON:0009145!4.32e-07!10;UBERON:0000161!4.57e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000974;3.11e-27;6!UBERON:0003127;3.11e-21;2!UBERON:0000341;5.15e-21;2!UBERON:0003343;3.26e-11;4!UBERON:0004785;3.26e-11;4!UBERON:0000002;6.55e-08;6!UBERON:0001560;6.55e-08;6!UBERON:0003126;5.08e-07;7!UBERON:0001005;5.08e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,3.11e-21,2;UBERON:0000341,6.96e-21,2;UBERON:0000974,9.54e-17,10;UBERON:0003343,3.42e-11,4;UBERON:0004785,3.42e-11,4;UBERON:0000002,6.34e-08,6;UBERON:0001560,6.34e-08,6;UBERON:0003126,5.08e-07,7;UBERON:0001005,5.08e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,1.39423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.34823682632161,0,0,0.0967563312890851,0.146178634172371,0,0,0,0,0,0,0,0.391102765469606,0,0,0.39961921916426,0,0,0,0,0,1.41416420770077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.235939446695481,1.28400018965175,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27940389140589,0,0,0,0,0,0,0.217716747896961,0,0.134704106029175,2.94061042109973,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr9:113054521..113054531,+ | |||
}} |
Revision as of 06:55, 14 September 2013
Short description: | p@chr9:113054521..113054531, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:113054521..113054531, + |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 3.11e-21 | 2 |
throat | 6.96e-21 | 2 |
neck | 9.54e-17 | 10 |
mucosa of oral region | 3.42e-11 | 4 |
respiratory system mucosa | 3.42e-11 | 4 |
uterine cervix | 6.34e-08 | 6 |
neck of organ | 6.34e-08 | 6 |
trachea | 5.08e-07 | 7 |
respiratory airway | 5.08e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 2.97e-09 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.