FFCP PHASE1:Hg19::chr9:136465213..136465223,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2939|description=CAGE_peak_at_chr9:136465213..136465223,-|id=chr9:136465213..136465223,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000333;5.35e-08;5|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:171!9.88e-09!10;DOID:3095!5.25e-08!22;DOID:2994!5.25e-08!22|ontology_enrichment_disease_v019=DOID:171;2.84e-14;10!DOID:3095;5.09e-07;22!DOID:2994;5.09e-07;22!DOID:169;7.17e-07;6|ontology_enrichment_disease_v019_2=DOID:171,3.25e-14,10;DOID:3095,5.40e-07,22;DOID:2994,5.40e-07,22;DOID:169,7.17e-07,6|ontology_enrichment_uberon=UBERON:0001869!1.56e-58!32;UBERON:0002619!4.73e-55!22;UBERON:0001893!6.22e-55!34;UBERON:0002020!7.21e-55!34;UBERON:0003528!7.21e-55!34;UBERON:0001950!2.28e-53!20;UBERON:0002791!4.85e-51!33;UBERON:0002780!1.09e-49!41;UBERON:0001890!1.09e-49!41;UBERON:0006240!1.09e-49!41;UBERON:0003080!2.02e-48!42;UBERON:0000956!2.74e-48!25;UBERON:0000203!2.74e-48!25;UBERON:0001049!5.84e-46!57;UBERON:0005068!5.84e-46!57;UBERON:0006241!5.84e-46!57;UBERON:0007135!5.84e-46!57;UBERON:0002616!2.99e-44!59;UBERON:0000955!5.85e-40!69;UBERON:0006238!5.85e-40!69;UBERON:0002346!1.43e-35!90;UBERON:0003056!1.63e-35!61;UBERON:0000073!3.72e-33!94;UBERON:0001016!3.72e-33!94;UBERON:0001017!6.34e-33!82;UBERON:0003075!1.34e-31!86;UBERON:0007284!1.34e-31!86;UBERON:0005743!3.54e-31!86;UBERON:0001871!7.95e-24!7;UBERON:0000033!2.57e-22!123;UBERON:0000200!9.69e-22!6;UBERON:0000153!4.93e-21!129;UBERON:0007811!4.93e-21!129;UBERON:0000924!2.66e-20!173;UBERON:0006601!2.66e-20!173;UBERON:0007023!1.44e-18!115;UBERON:0004121!1.12e-17!169;UBERON:0002021!3.20e-17!5;UBERON:0002771!8.05e-17!3;UBERON:0000025!3.14e-12!194;UBERON:0001872!7.17e-10!5;UBERON:0000349!1.00e-09!5;UBERON:0002420!3.06e-09!9;UBERON:0007245!3.06e-09!9;UBERON:0010009!3.06e-09!9;UBERON:0010011!3.06e-09!9;UBERON:0000454!3.06e-09!9;UBERON:0000064!3.26e-09!219;UBERON:0002308!5.29e-09!9;UBERON:0000125!5.29e-09!9;UBERON:0004111!8.90e-09!241;UBERON:0000477!2.45e-07!286;UBERON:0000483!4.17e-07!309;UBERON:0000119!5.54e-07!312;UBERON:0009663!6.45e-07!7;UBERON:0003112!8.21e-07!1;UBERON:0000032!8.21e-07!1;UBERON:0005253!8.21e-07!1;UBERON:0003128!8.21e-07!1;UBERON:0002241!8.21e-07!1;UBERON:0001703!8.21e-07!1;UBERON:0004761!8.21e-07!1;UBERON:0009617!8.21e-07!1|ontology_enrichment_uberon_v019=UBERON:0001871;8.62e-20;6!UBERON:0002771;9.07e-18;2!UBERON:0001950;7.18e-15;20!UBERON:0002619;1.20e-13;22!UBERON:0000956;3.64e-12;25!UBERON:0000203;3.64e-12;25!UBERON:0002346;1.44e-09;4!UBERON:0000923;1.44e-09;4!UBERON:0010316;1.44e-09;4!UBERON:0005291;1.44e-09;4!UBERON:0001893;3.29e-08;34!UBERON:0003528;5.35e-08;34!UBERON:0002020;5.35e-08;34!UBERON:0000013;5.35e-08;5!UBERON:0002410;5.35e-08;5!UBERON:0002021;6.55e-08;5!UBERON:0002050;6.55e-08;5!UBERON:0005423;6.55e-08;5!UBERON:0002791;1.81e-07;32!UBERON:0001869;1.81e-07;32!UBERON:0000200;8.48e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0001871,7.84e-20,6;UBERON:0002771,6.48e-18,2;UBERON:0001950,6.53e-15,20;UBERON:0002619,1.10e-13,22;UBERON:0000956,3.38e-12,25;UBERON:0000203,3.38e-12,25;UBERON:0002791,9.04e-10,32;UBERON:0001869,9.04e-10,32;UBERON:0003528,2.97e-09,34;UBERON:0002020,2.97e-09,34;UBERON:0001893,2.97e-09,34;UBERON:0000013,5.35e-08,5;UBERON:0002410,5.35e-08,5;UBERON:0002021,6.13e-08,5;UBERON:0002780,7.94e-08,41;UBERON:0001890,7.94e-08,41;UBERON:0003080,7.94e-08,41;UBERON:0006240,7.94e-08,41;UBERON:0000200,7.58e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984685914873589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22429104652196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2939 | |||
|description=CAGE_peak_at_chr9:136465213..136465223,- | |||
|id=chr9:136465213..136465223,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;5.35e-08;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!9.88e-09!10;DOID:3095!5.25e-08!22;DOID:2994!5.25e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:171;2.84e-14;10!DOID:3095;5.09e-07;22!DOID:2994;5.09e-07;22!DOID:169;7.17e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.25e-14,10;DOID:3095,5.40e-07,22;DOID:2994,5.40e-07,22;DOID:169,7.17e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001869!1.56e-58!32;UBERON:0002619!4.73e-55!22;UBERON:0001893!6.22e-55!34;UBERON:0002020!7.21e-55!34;UBERON:0003528!7.21e-55!34;UBERON:0001950!2.28e-53!20;UBERON:0002791!4.85e-51!33;UBERON:0002780!1.09e-49!41;UBERON:0001890!1.09e-49!41;UBERON:0006240!1.09e-49!41;UBERON:0003080!2.02e-48!42;UBERON:0000956!2.74e-48!25;UBERON:0000203!2.74e-48!25;UBERON:0001049!5.84e-46!57;UBERON:0005068!5.84e-46!57;UBERON:0006241!5.84e-46!57;UBERON:0007135!5.84e-46!57;UBERON:0002616!2.99e-44!59;UBERON:0000955!5.85e-40!69;UBERON:0006238!5.85e-40!69;UBERON:0002346!1.43e-35!90;UBERON:0003056!1.63e-35!61;UBERON:0000073!3.72e-33!94;UBERON:0001016!3.72e-33!94;UBERON:0001017!6.34e-33!82;UBERON:0003075!1.34e-31!86;UBERON:0007284!1.34e-31!86;UBERON:0005743!3.54e-31!86;UBERON:0001871!7.95e-24!7;UBERON:0000033!2.57e-22!123;UBERON:0000200!9.69e-22!6;UBERON:0000153!4.93e-21!129;UBERON:0007811!4.93e-21!129;UBERON:0000924!2.66e-20!173;UBERON:0006601!2.66e-20!173;UBERON:0007023!1.44e-18!115;UBERON:0004121!1.12e-17!169;UBERON:0002021!3.20e-17!5;UBERON:0002771!8.05e-17!3;UBERON:0000025!3.14e-12!194;UBERON:0001872!7.17e-10!5;UBERON:0000349!1.00e-09!5;UBERON:0002420!3.06e-09!9;UBERON:0007245!3.06e-09!9;UBERON:0010009!3.06e-09!9;UBERON:0010011!3.06e-09!9;UBERON:0000454!3.06e-09!9;UBERON:0000064!3.26e-09!219;UBERON:0002308!5.29e-09!9;UBERON:0000125!5.29e-09!9;UBERON:0004111!8.90e-09!241;UBERON:0000477!2.45e-07!286;UBERON:0000483!4.17e-07!309;UBERON:0000119!5.54e-07!312;UBERON:0009663!6.45e-07!7;UBERON:0003112!8.21e-07!1;UBERON:0000032!8.21e-07!1;UBERON:0005253!8.21e-07!1;UBERON:0003128!8.21e-07!1;UBERON:0002241!8.21e-07!1;UBERON:0001703!8.21e-07!1;UBERON:0004761!8.21e-07!1;UBERON:0009617!8.21e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001871;8.62e-20;6!UBERON:0002771;9.07e-18;2!UBERON:0001950;7.18e-15;20!UBERON:0002619;1.20e-13;22!UBERON:0000956;3.64e-12;25!UBERON:0000203;3.64e-12;25!UBERON:0002346;1.44e-09;4!UBERON:0000923;1.44e-09;4!UBERON:0010316;1.44e-09;4!UBERON:0005291;1.44e-09;4!UBERON:0001893;3.29e-08;34!UBERON:0003528;5.35e-08;34!UBERON:0002020;5.35e-08;34!UBERON:0000013;5.35e-08;5!UBERON:0002410;5.35e-08;5!UBERON:0002021;6.55e-08;5!UBERON:0002050;6.55e-08;5!UBERON:0005423;6.55e-08;5!UBERON:0002791;1.81e-07;32!UBERON:0001869;1.81e-07;32!UBERON:0000200;8.48e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001871,7.84e-20,6;UBERON:0002771,6.48e-18,2;UBERON:0001950,6.53e-15,20;UBERON:0002619,1.10e-13,22;UBERON:0000956,3.38e-12,25;UBERON:0000203,3.38e-12,25;UBERON:0002791,9.04e-10,32;UBERON:0001869,9.04e-10,32;UBERON:0003528,2.97e-09,34;UBERON:0002020,2.97e-09,34;UBERON:0001893,2.97e-09,34;UBERON:0000013,5.35e-08,5;UBERON:0002410,5.35e-08,5;UBERON:0002021,6.13e-08,5;UBERON:0002780,7.94e-08,41;UBERON:0001890,7.94e-08,41;UBERON:0003080,7.94e-08,41;UBERON:0006240,7.94e-08,41;UBERON:0000200,7.58e-07,6 | |||
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|short_description=p@chr9:136465213..136465223,- | |||
}} |
Revision as of 08:02, 14 September 2013
Short description: | p@chr9:136465213..136465223, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:136465213..136465223, - |
Coexpression cluster: | C2939_neuroblastoma_middle_occipital_parietal_medial_olfactory_smallcell |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
temporal lobe | 7.84e-20 | 6 |
middle temporal gyrus | 6.48e-18 | 2 |
neocortex | 6.53e-15 | 20 |
regional part of cerebral cortex | 1.10e-13 | 22 |
cerebral cortex | 3.38e-12 | 25 |
pallium | 3.38e-12 | 25 |
regional part of telencephalon | 9.04e-10 | 32 |
cerebral hemisphere | 9.04e-10 | 32 |
brain grey matter | 2.97e-09 | 34 |
gray matter | 2.97e-09 | 34 |
telencephalon | 2.97e-09 | 34 |
sympathetic nervous system | 5.35e-08 | 5 |
autonomic nervous system | 5.35e-08 | 5 |
occipital lobe | 6.13e-08 | 5 |
regional part of forebrain | 7.94e-08 | 41 |
forebrain | 7.94e-08 | 41 |
anterior neural tube | 7.94e-08 | 41 |
future forebrain | 7.94e-08 | 41 |
gyrus | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.25e-14 | 10 |
germ cell and embryonal cancer | 5.40e-07 | 22 |
germ cell cancer | 5.40e-07 | 22 |
neuroendocrine tumor | 7.17e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.