FFCP PHASE1:Mm9::chr5:88950231..88950234,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2431|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:88950231..88950234,-|id=chr5:88950231..88950234,-|ontology_enrichment_celltype=CL:0000553!3.38e-15!6;CL:0000556!3.38e-15!6;CL:0000050!4.84e-10!9;CL:0002031!3.56e-08!25;CL:0000414!3.68e-08!11;CL:0000839!7.43e-07!13|ontology_enrichment_celltype_v019_2=CL:0000553,3.13e-15,6;CL:0000556,3.13e-15,6;CL:0000050,2.23e-10,9;CL:0002031,7.34e-10,25;CL:0000988,1.00e-07,32;CL:0002032,1.00e-07,32;CL:0000037,1.00e-07,32;CL:0000837,1.00e-07,32;CL:0000839,2.28e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002465!1.15e-11!3;UBERON:0000331!9.07e-11!3;UBERON:0002116!9.07e-11!3;UBERON:0001204!9.07e-11!3;UBERON:0001168!9.07e-11!3;UBERON:0001962!1.38e-08!2;UBERON:0001961!1.38e-08!2;UBERON:0001744!1.38e-08!2;UBERON:0002193!4.69e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0001962,1.27e-20,2;UBERON:0001961,1.27e-20,2;UBERON:0001744,1.27e-20,2;UBERON:0002465,4.25e-14,3;UBERON:0003199,2.31e-11,1;UBERON:0002193,2.96e-07,48;UBERON:0002405,2.96e-07,48|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.809901069559304,0,1.89277299214943,2.19383093769182,2.54633791078818,0.17008658030214,4.56738375524072,1.04479915655574,1.91990907352088,4.5881856213434,0,0,0,0.380046838912748,0.756090389279792,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0.517875767294343,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,5.8755122697976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87957968877638,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:88950231..88950234,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2431 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:88950231..88950234,- | |||
|id=chr5:88950231..88950234,- | |||
|ontology_enrichment_celltype=CL:0000553!3.38e-15!6;CL:0000556!3.38e-15!6;CL:0000050!4.84e-10!9;CL:0002031!3.56e-08!25;CL:0000414!3.68e-08!11;CL:0000839!7.43e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,3.13e-15,6;CL:0000556,3.13e-15,6;CL:0000050,2.23e-10,9;CL:0002031,7.34e-10,25;CL:0000988,1.00e-07,32;CL:0002032,1.00e-07,32;CL:0000037,1.00e-07,32;CL:0000837,1.00e-07,32;CL:0000839,2.28e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!1.15e-11!3;UBERON:0000331!9.07e-11!3;UBERON:0002116!9.07e-11!3;UBERON:0001204!9.07e-11!3;UBERON:0001168!9.07e-11!3;UBERON:0001962!1.38e-08!2;UBERON:0001961!1.38e-08!2;UBERON:0001744!1.38e-08!2;UBERON:0002193!4.69e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,1.27e-20,2;UBERON:0001961,1.27e-20,2;UBERON:0001744,1.27e-20,2;UBERON:0002465,4.25e-14,3;UBERON:0003199,2.31e-11,1;UBERON:0002193,2.96e-07,48;UBERON:0002405,2.96e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.809901069559304,0,1.89277299214943,2.19383093769182,2.54633791078818,0.17008658030214,4.56738375524072,1.04479915655574,1.91990907352088,4.5881856213434,0,0,0,0.380046838912748,0.756090389279792,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0.517875767294343,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,5.8755122697976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87957968877638,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:88950231..88950234,- | |||
}} |
Revision as of 08:12, 14 September 2013
Short description: | p@chr5:88950231..88950234, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:88950231..88950234, - |
Coexpression cluster: | MCL_coexpression_mm9:2431 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 3.13e-15 | 6 |
megakaryocyte | 3.13e-15 | 6 |
megakaryocyte-erythroid progenitor cell | 2.23e-10 | 9 |
hematopoietic lineage restricted progenitor cell | 7.34e-10 | 25 |
hematopoietic cell | 1.00e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.00e-07 | 32 |
hematopoietic stem cell | 1.00e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.00e-07 | 32 |
myeloid lineage restricted progenitor cell | 2.28e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 1.27e-20 | 2 |
mucosa-associated lymphoid tissue | 1.27e-20 | 2 |
lymphoid tissue | 1.27e-20 | 2 |
lymphoid system | 4.25e-14 | 3 |
egg chamber | 2.31e-11 | 1 |
hemolymphoid system | 2.96e-07 | 48 |
immune system | 2.96e-07 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.