FFCP PHASE1:Mm9::chr7:29152679..29152684,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=427|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:29152679..29152684,-|id=chr7:29152679..29152684,-|ontology_enrichment_celltype=CL:0002453!6.66e-10!8;CL:0000128!5.18e-08!6;CL:0000126!5.18e-08!6;CL:0000127!5.18e-08!6;CL:0000333!2.13e-07!10;CL:0000095!2.13e-07!10;CL:0000243!2.13e-07!10;CL:0000123!2.13e-07!10;CL:0000125!2.13e-07!10;CL:0000030!2.13e-07!10;CL:0000339!2.13e-07!10|ontology_enrichment_celltype_v019_2=CL:0000128,3.91e-58,6;CL:0000126,3.91e-58,6;CL:0000127,3.91e-58,6;CL:0002603,2.75e-44,2;CL:0002453,6.68e-44,8;CL:0000333,2.37e-35,10;CL:0000095,2.37e-35,10;CL:0000243,2.37e-35,10;CL:0000123,2.37e-35,10;CL:0000125,2.37e-35,10;CL:0000030,2.37e-35,10;CL:0000339,2.37e-35,10;CL:0002605,3.12e-12,2;CL:0002604,3.12e-12,2;CL:0002319,6.31e-09,43;CL:0000221,9.66e-09,44;CL:0000133,9.66e-09,44;CL:0000219,2.91e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.43e-23,4;UBERON:0002680,8.43e-23,4;UBERON:0001895,8.43e-23,4;UBERON:0010092,8.43e-23,4;UBERON:0006215,8.43e-23,4;UBERON:0004733,1.34e-15,6;UBERON:0004732,1.34e-15,6;UBERON:0002028,1.34e-15,6;UBERON:0007277,1.34e-15,6;UBERON:0003076,2.45e-08,12;UBERON:0003057,2.45e-08,12|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.281577444303333,0,0,0.0797721589953364,0,0.174840804837995,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,2.34717403304412,2.61630187656536,0.439372365468944,2.52758868796568,0.55994568650145,1.43752564364972,0,0,0.672187598284928,0.771778308107841,0.286533439938757,0.515672092277442,0,0,0,0,0.889294796111139,0,0,0,0.299600110518405,0.768436610643109,0.103689612308478,0.405017814995072,0.210324961351382,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,0,0,0,0.589257170947335,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0.149790639404823,0,0,0.173824320192276,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0.378212160335639,0.175951124163949,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0.232236671860439,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.469380496577004,0.335012514883631,0,0.390267295715598,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0.304464949114599,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0.234714477291508,0,0,0,0,0.316011120628178,0,0.205421914329655,0,0,0.39736270956253,0.240390899039938,0.443068581523732,0,0.0762068066549998,0.302478555410522,0.194915761479505,0.0962118416403295,0.116876902181569,0,0.221985953374065,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.505394423527595,0,0,0,0,0.0574354689556133,0,0,0.38581844092741,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0|short_description=p@chr7:29152679..29152684,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=427 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:29152679..29152684,- | |||
|id=chr7:29152679..29152684,- | |||
|ontology_enrichment_celltype=CL:0002453!6.66e-10!8;CL:0000128!5.18e-08!6;CL:0000126!5.18e-08!6;CL:0000127!5.18e-08!6;CL:0000333!2.13e-07!10;CL:0000095!2.13e-07!10;CL:0000243!2.13e-07!10;CL:0000123!2.13e-07!10;CL:0000125!2.13e-07!10;CL:0000030!2.13e-07!10;CL:0000339!2.13e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,3.91e-58,6;CL:0000126,3.91e-58,6;CL:0000127,3.91e-58,6;CL:0002603,2.75e-44,2;CL:0002453,6.68e-44,8;CL:0000333,2.37e-35,10;CL:0000095,2.37e-35,10;CL:0000243,2.37e-35,10;CL:0000123,2.37e-35,10;CL:0000125,2.37e-35,10;CL:0000030,2.37e-35,10;CL:0000339,2.37e-35,10;CL:0002605,3.12e-12,2;CL:0002604,3.12e-12,2;CL:0002319,6.31e-09,43;CL:0000221,9.66e-09,44;CL:0000133,9.66e-09,44;CL:0000219,2.91e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.43e-23,4;UBERON:0002680,8.43e-23,4;UBERON:0001895,8.43e-23,4;UBERON:0010092,8.43e-23,4;UBERON:0006215,8.43e-23,4;UBERON:0004733,1.34e-15,6;UBERON:0004732,1.34e-15,6;UBERON:0002028,1.34e-15,6;UBERON:0007277,1.34e-15,6;UBERON:0003076,2.45e-08,12;UBERON:0003057,2.45e-08,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.281577444303333,0,0,0.0797721589953364,0,0.174840804837995,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,2.34717403304412,2.61630187656536,0.439372365468944,2.52758868796568,0.55994568650145,1.43752564364972,0,0,0.672187598284928,0.771778308107841,0.286533439938757,0.515672092277442,0,0,0,0,0.889294796111139,0,0,0,0.299600110518405,0.768436610643109,0.103689612308478,0.405017814995072,0.210324961351382,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,0,0,0,0.589257170947335,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0.149790639404823,0,0,0.173824320192276,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0.378212160335639,0.175951124163949,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0.232236671860439,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.469380496577004,0.335012514883631,0,0.390267295715598,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0.304464949114599,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0.234714477291508,0,0,0,0,0.316011120628178,0,0.205421914329655,0,0,0.39736270956253,0.240390899039938,0.443068581523732,0,0.0762068066549998,0.302478555410522,0.194915761479505,0.0962118416403295,0.116876902181569,0,0.221985953374065,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.505394423527595,0,0,0,0,0.0574354689556133,0,0,0.38581844092741,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr7:29152679..29152684,- | |||
}} |
Revision as of 13:03, 14 September 2013
Short description: | p@chr7:29152679..29152684, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:29152679..29152684, - |
Coexpression cluster: | MCL_coexpression_mm9:427 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 3.91e-58 | 6 |
macroglial cell | 3.91e-58 | 6 |
astrocyte | 3.91e-58 | 6 |
astrocyte of the cerebellum | 2.75e-44 | 2 |
oligodendrocyte precursor cell | 6.68e-44 | 8 |
migratory neural crest cell | 2.37e-35 | 10 |
neuron associated cell | 2.37e-35 | 10 |
glial cell (sensu Vertebrata) | 2.37e-35 | 10 |
neuron associated cell (sensu Vertebrata) | 2.37e-35 | 10 |
glial cell | 2.37e-35 | 10 |
glioblast | 2.37e-35 | 10 |
glioblast (sensu Vertebrata) | 2.37e-35 | 10 |
astrocyte of the cerebral cortex | 3.12e-12 | 2 |
astrocyte of the hippocampus | 3.12e-12 | 2 |
neural cell | 6.31e-09 | 43 |
ectodermal cell | 9.66e-09 | 44 |
neurectodermal cell | 9.66e-09 | 44 |
motile cell | 2.91e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 8.43e-23 | 4 |
regional part of metencephalon | 8.43e-23 | 4 |
metencephalon | 8.43e-23 | 4 |
future metencephalon | 8.43e-23 | 4 |
rhombic lip | 8.43e-23 | 4 |
segmental subdivision of hindbrain | 1.34e-15 | 6 |
segmental subdivision of nervous system | 1.34e-15 | 6 |
hindbrain | 1.34e-15 | 6 |
presumptive hindbrain | 1.34e-15 | 6 |
posterior neural tube | 2.45e-08 | 12 |
chordal neural plate | 2.45e-08 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.