FFCP PHASE1:Mm9::chr7:57165677..57165684,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=104245|HGNC=|MCL_coexpression_id=218|UniProt=B2RQX9,B2RXV9|association_with_transcript=8bp_to_NM_001146013,uc009hbv.2,uc012fle.1_5end|description=CAGE_peak_10_at_Slc6a5_5end|id=chr7:57165677..57165684,+|ontology_enrichment_celltype=CL:0000117!3.60e-13!23;CL:0000337!3.60e-13!23;CL:0002612!5.12e-13!3;CL:0002614!5.62e-13!3;CL:0002611!1.83e-09!2;CL:0000540!9.04e-09!33;CL:0000047!9.04e-09!33;CL:0000031!9.04e-09!33;CL:0000404!9.04e-09!33;CL:0000393!3.26e-07!39;CL:0000211!3.26e-07!39|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003076!4.81e-34!12;UBERON:0003057!4.81e-34!12;UBERON:0002240!5.31e-25!6;UBERON:0005174!5.31e-25!6;UBERON:0001137!5.31e-25!6;UBERON:0002298!1.13e-24!6;UBERON:0001948!8.08e-21!5;UBERON:0002315!8.08e-21!5;UBERON:0002950!1.89e-16!4;UBERON:0001891!1.89e-16!4;UBERON:0009616!1.89e-16!4;UBERON:0001049!1.29e-15!52;UBERON:0005068!1.29e-15!52;UBERON:0006241!1.29e-15!52;UBERON:0007135!1.29e-15!52;UBERON:0002257!5.12e-13!3;UBERON:0002038!5.62e-13!3;UBERON:0002308!5.62e-13!3;UBERON:0009663!5.62e-13!3;UBERON:0009661!5.62e-13!3;UBERON:0006331!5.62e-13!3;UBERON:0000125!5.62e-13!3;UBERON:0001017!6.71e-12!73;UBERON:0005743!6.71e-12!73;UBERON:0004733!8.90e-12!6;UBERON:0004732!8.90e-12!6;UBERON:0002028!8.90e-12!6;UBERON:0007277!8.90e-12!6;UBERON:0000073!1.66e-11!75;UBERON:0001016!1.66e-11!75;UBERON:0002346!1.02e-10!71;UBERON:0003075!1.02e-10!71;UBERON:0007284!1.02e-10!71;UBERON:0001896!6.98e-10!2;UBERON:0005290!6.98e-10!2;UBERON:0010096!6.98e-10!2;UBERON:0002256!1.83e-09!2;UBERON:0002020!1.40e-08!34;UBERON:0002420!1.77e-08!8;UBERON:0007245!1.77e-08!8;UBERON:0010009!1.77e-08!8;UBERON:0010011!1.77e-08!8;UBERON:0000454!1.77e-08!8;UBERON:0004121!1.07e-07!102;UBERON:0000924!1.07e-07!102;UBERON:0006601!1.07e-07!102;UBERON:0002616!7.21e-07!49;UBERON:0000489!9.09e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001896,6.41e-58,2;UBERON:0002298,6.41e-58,2;UBERON:0005290,6.41e-58,2;UBERON:0010096,6.41e-58,2;UBERON:0003076,1.18e-22,12;UBERON:0003057,1.18e-22,12;UBERON:0004733,3.10e-20,6;UBERON:0004732,3.10e-20,6;UBERON:0002028,3.10e-20,6;UBERON:0007277,3.10e-20,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.662605622854841,0,0,0,0,0.127687338085188,0,0,0,0,0.558365998002762,0.56276261003168,0.15279824777681,0.589257170947335,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.209446706813455,0,0,0,0,0.149790639404823,0.457500602818626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72936002979246,3.7507739709505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8939313422207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p10@Slc6a5}} | ||
|EntrezGene=104245 | |||
|HGNC= | |||
|MCL_coexpression_id=218 | |||
|UniProt=B2RQX9,B2RXV9 | |||
|association_with_transcript=8bp_to_NM_001146013,uc009hbv.2,uc012fle.1_5end | |||
|description=CAGE_peak_10_at_Slc6a5_5end | |||
|id=chr7:57165677..57165684,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.60e-13!23;CL:0000337!3.60e-13!23;CL:0002612!5.12e-13!3;CL:0002614!5.62e-13!3;CL:0002611!1.83e-09!2;CL:0000540!9.04e-09!33;CL:0000047!9.04e-09!33;CL:0000031!9.04e-09!33;CL:0000404!9.04e-09!33;CL:0000393!3.26e-07!39;CL:0000211!3.26e-07!39 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!4.81e-34!12;UBERON:0003057!4.81e-34!12;UBERON:0002240!5.31e-25!6;UBERON:0005174!5.31e-25!6;UBERON:0001137!5.31e-25!6;UBERON:0002298!1.13e-24!6;UBERON:0001948!8.08e-21!5;UBERON:0002315!8.08e-21!5;UBERON:0002950!1.89e-16!4;UBERON:0001891!1.89e-16!4;UBERON:0009616!1.89e-16!4;UBERON:0001049!1.29e-15!52;UBERON:0005068!1.29e-15!52;UBERON:0006241!1.29e-15!52;UBERON:0007135!1.29e-15!52;UBERON:0002257!5.12e-13!3;UBERON:0002038!5.62e-13!3;UBERON:0002308!5.62e-13!3;UBERON:0009663!5.62e-13!3;UBERON:0009661!5.62e-13!3;UBERON:0006331!5.62e-13!3;UBERON:0000125!5.62e-13!3;UBERON:0001017!6.71e-12!73;UBERON:0005743!6.71e-12!73;UBERON:0004733!8.90e-12!6;UBERON:0004732!8.90e-12!6;UBERON:0002028!8.90e-12!6;UBERON:0007277!8.90e-12!6;UBERON:0000073!1.66e-11!75;UBERON:0001016!1.66e-11!75;UBERON:0002346!1.02e-10!71;UBERON:0003075!1.02e-10!71;UBERON:0007284!1.02e-10!71;UBERON:0001896!6.98e-10!2;UBERON:0005290!6.98e-10!2;UBERON:0010096!6.98e-10!2;UBERON:0002256!1.83e-09!2;UBERON:0002020!1.40e-08!34;UBERON:0002420!1.77e-08!8;UBERON:0007245!1.77e-08!8;UBERON:0010009!1.77e-08!8;UBERON:0010011!1.77e-08!8;UBERON:0000454!1.77e-08!8;UBERON:0004121!1.07e-07!102;UBERON:0000924!1.07e-07!102;UBERON:0006601!1.07e-07!102;UBERON:0002616!7.21e-07!49;UBERON:0000489!9.09e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,6.41e-58,2;UBERON:0002298,6.41e-58,2;UBERON:0005290,6.41e-58,2;UBERON:0010096,6.41e-58,2;UBERON:0003076,1.18e-22,12;UBERON:0003057,1.18e-22,12;UBERON:0004733,3.10e-20,6;UBERON:0004732,3.10e-20,6;UBERON:0002028,3.10e-20,6;UBERON:0007277,3.10e-20,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.662605622854841,0,0,0,0,0.127687338085188,0,0,0,0,0.558365998002762,0.56276261003168,0.15279824777681,0.589257170947335,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.209446706813455,0,0,0,0,0.149790639404823,0.457500602818626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72936002979246,3.7507739709505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8939313422207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@Slc6a5 | |||
}} |
Revision as of 13:55, 14 September 2013
Short description: | p10@Slc6a5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Slc6a5_5end |
Coexpression cluster: | MCL_coexpression_mm9:218 |
Association with transcript: | 8bp_to_NM_001146013, uc009hbv.2, uc012fle.1_5end |
EntrezGene: | Slc6a5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 6.41e-58 | 2 |
brainstem | 6.41e-58 | 2 |
myelencephalon | 6.41e-58 | 2 |
future myelencephalon | 6.41e-58 | 2 |
posterior neural tube | 1.18e-22 | 12 |
chordal neural plate | 1.18e-22 | 12 |
segmental subdivision of hindbrain | 3.10e-20 | 6 |
segmental subdivision of nervous system | 3.10e-20 | 6 |
hindbrain | 3.10e-20 | 6 |
presumptive hindbrain | 3.10e-20 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.