FFCP PHASE1:Mm9::chr8:129965075..129965087,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=307|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:129965075..129965087,-|id=chr8:129965075..129965087,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,8.97e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0005172,3.20e-16,49;UBERON:0005173,3.20e-16,49;UBERON:0002417,3.20e-16,49;UBERON:0000916,3.20e-16,49;UBERON:0003104,1.14e-15,61;UBERON:0009142,1.14e-15,61;UBERON:0002113,7.42e-14,14;UBERON:0003918,7.42e-14,14;UBERON:0011143,7.42e-14,14;UBERON:0005095,7.42e-14,14;UBERON:0007687,7.42e-14,14;UBERON:0001008,2.30e-12,19;UBERON:0009569,3.86e-11,66;UBERON:0002107,5.91e-11,22;UBERON:0007499,5.91e-11,22;UBERON:0006925,5.91e-11,22;UBERON:0009497,5.91e-11,22;UBERON:0000015,5.91e-11,22;UBERON:0002423,5.91e-11,22;UBERON:0006235,5.91e-11,22;UBERON:0008835,5.91e-11,22;UBERON:0003894,5.91e-11,22;UBERON:0004161,5.91e-11,22;UBERON:0008836,5.91e-11,22;UBERON:0002100,1.50e-10,90;UBERON:0006554,1.66e-10,18;UBERON:0009854,2.07e-10,23;UBERON:0009856,2.07e-10,23;UBERON:0005177,6.39e-10,79;UBERON:0002365,1.87e-09,25;UBERON:0002330,1.87e-09,25;UBERON:0000489,7.87e-09,21;UBERON:0005256,8.19e-07,45|phase1_expression=0,0,0,1.51232105653415,1.50268718983904,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0.57423196411502,0.430761996159075,0.646413698057667,0,0.756090389279792,0,0,0,0,0,0,0,0,0,1.0470474879476,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,1.3599426674155,0,7.14754059192436,5.37632264516803,0.421333260395256,0,0.259786004602869,0,0,0,0,0,0.216491041011214,0,0,0.34255163915718,0.258937883647172,0,0,0,0,0,0,0,0.494389935468748,0.289198713839823,0.884610551949874,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0.411564272815887,0,0.702213187313235,0,0,0,0,0,0,0,0.308534225774757,0.465067889500816,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0.584799949701329,0.658650345873152,0.268412837520744,0,0,1.98251269790279,0.264450566663544,0,0,0,0,0,0.190225626112559,0.474529061544512,0.164698954724011,1.25667604400135,1.1937388322469,0.38992817423824,0,0.864552199498777,0.995706366271836,0,0.456994050438915,1.1270773567308,2.03651327845314,1.35766741017338,1.1221731182451,1.64414996523069,1.91893192373483,4.55296310739987,4.07210640941942,5.92905254174298,0,0,0.224862112384854,0,0,0,0,0,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,1.01031551178845,2.15276896226295,1.92977408545347,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0.775284879504663,0.363533729477506,0,0,0,1.03135543248187,0,0,0,0,0,0,0.164549020602121,0,0,0,0.220528398054962,1.6488625294148,0,0.301564624640779,1.07435109602823,2.46211349617592,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.578574190077352,0,0,0.621339313086926,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.453460767230423,0,0,0,0,0.375364950902364,0.915758121336325,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0.38581844092741,0.824171801606613,0,0,0.177475806159338,0.476872379894642,0.290692833264657,0.282328141245992,0.0846146078916765,0.365855945745545,0.263069711437843,0,0,0,0,0,0.309873682371932,0,0.249810577937946,0,0,0.57386499620653,0.882365676478062,0|short_description=p@chr8:129965075..129965087,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=307 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:129965075..129965087,- | |||
|id=chr8:129965075..129965087,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.97e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,3.20e-16,49;UBERON:0005173,3.20e-16,49;UBERON:0002417,3.20e-16,49;UBERON:0000916,3.20e-16,49;UBERON:0003104,1.14e-15,61;UBERON:0009142,1.14e-15,61;UBERON:0002113,7.42e-14,14;UBERON:0003918,7.42e-14,14;UBERON:0011143,7.42e-14,14;UBERON:0005095,7.42e-14,14;UBERON:0007687,7.42e-14,14;UBERON:0001008,2.30e-12,19;UBERON:0009569,3.86e-11,66;UBERON:0002107,5.91e-11,22;UBERON:0007499,5.91e-11,22;UBERON:0006925,5.91e-11,22;UBERON:0009497,5.91e-11,22;UBERON:0000015,5.91e-11,22;UBERON:0002423,5.91e-11,22;UBERON:0006235,5.91e-11,22;UBERON:0008835,5.91e-11,22;UBERON:0003894,5.91e-11,22;UBERON:0004161,5.91e-11,22;UBERON:0008836,5.91e-11,22;UBERON:0002100,1.50e-10,90;UBERON:0006554,1.66e-10,18;UBERON:0009854,2.07e-10,23;UBERON:0009856,2.07e-10,23;UBERON:0005177,6.39e-10,79;UBERON:0002365,1.87e-09,25;UBERON:0002330,1.87e-09,25;UBERON:0000489,7.87e-09,21;UBERON:0005256,8.19e-07,45 | |||
|phase1_expression=0,0,0,1.51232105653415,1.50268718983904,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0.57423196411502,0.430761996159075,0.646413698057667,0,0.756090389279792,0,0,0,0,0,0,0,0,0,1.0470474879476,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,1.3599426674155,0,7.14754059192436,5.37632264516803,0.421333260395256,0,0.259786004602869,0,0,0,0,0,0.216491041011214,0,0,0.34255163915718,0.258937883647172,0,0,0,0,0,0,0,0.494389935468748,0.289198713839823,0.884610551949874,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0.411564272815887,0,0.702213187313235,0,0,0,0,0,0,0,0.308534225774757,0.465067889500816,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0.584799949701329,0.658650345873152,0.268412837520744,0,0,1.98251269790279,0.264450566663544,0,0,0,0,0,0.190225626112559,0.474529061544512,0.164698954724011,1.25667604400135,1.1937388322469,0.38992817423824,0,0.864552199498777,0.995706366271836,0,0.456994050438915,1.1270773567308,2.03651327845314,1.35766741017338,1.1221731182451,1.64414996523069,1.91893192373483,4.55296310739987,4.07210640941942,5.92905254174298,0,0,0.224862112384854,0,0,0,0,0,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,1.01031551178845,2.15276896226295,1.92977408545347,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0.775284879504663,0.363533729477506,0,0,0,1.03135543248187,0,0,0,0,0,0,0.164549020602121,0,0,0,0.220528398054962,1.6488625294148,0,0.301564624640779,1.07435109602823,2.46211349617592,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.578574190077352,0,0,0.621339313086926,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.453460767230423,0,0,0,0,0.375364950902364,0.915758121336325,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0.38581844092741,0.824171801606613,0,0,0.177475806159338,0.476872379894642,0.290692833264657,0.282328141245992,0.0846146078916765,0.365855945745545,0.263069711437843,0,0,0,0,0,0.309873682371932,0,0.249810577937946,0,0,0.57386499620653,0.882365676478062,0 | |||
|short_description=p@chr8:129965075..129965087,- | |||
}} |
Revision as of 15:12, 14 September 2013
Short description: | p@chr8:129965075..129965087, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:129965075..129965087, - |
Coexpression cluster: | MCL_coexpression_mm9:307 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.97e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
abdomen element | 3.20e-16 | 49 |
abdominal segment element | 3.20e-16 | 49 |
abdominal segment of trunk | 3.20e-16 | 49 |
abdomen | 3.20e-16 | 49 |
mesenchyme | 1.14e-15 | 61 |
entire embryonic mesenchyme | 1.14e-15 | 61 |
kidney | 7.42e-14 | 14 |
kidney mesenchyme | 7.42e-14 | 14 |
upper urinary tract | 7.42e-14 | 14 |
kidney rudiment | 7.42e-14 | 14 |
kidney field | 7.42e-14 | 14 |
renal system | 2.30e-12 | 19 |
subdivision of trunk | 3.86e-11 | 66 |
liver | 5.91e-11 | 22 |
epithelial sac | 5.91e-11 | 22 |
digestive gland | 5.91e-11 | 22 |
epithelium of foregut-midgut junction | 5.91e-11 | 22 |
anatomical boundary | 5.91e-11 | 22 |
hepatobiliary system | 5.91e-11 | 22 |
foregut-midgut junction | 5.91e-11 | 22 |
hepatic diverticulum | 5.91e-11 | 22 |
liver primordium | 5.91e-11 | 22 |
septum transversum | 5.91e-11 | 22 |
liver bud | 5.91e-11 | 22 |
trunk | 1.50e-10 | 90 |
urinary system structure | 1.66e-10 | 18 |
digestive tract diverticulum | 2.07e-10 | 23 |
sac | 2.07e-10 | 23 |
trunk region element | 6.39e-10 | 79 |
exocrine gland | 1.87e-09 | 25 |
exocrine system | 1.87e-09 | 25 |
cavitated compound organ | 7.87e-09 | 21 |
trunk mesenchyme | 8.19e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.