FFCP PHASE1:Mm9::chr8:15519933..15519937,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1400|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:15519933..15519937,-|id=chr8:15519933..15519937,-|ontology_enrichment_celltype=CL:0002371!3.40e-30!118;CL:0000144!3.39e-29!121;CL:0000012!3.39e-29!121;CL:0000548!3.70e-29!115;CL:0000004!3.70e-29!115;CL:0000255!3.70e-29!115;CL:0002321!2.01e-21!70;CL:0000220!2.01e-21!70;CL:0000723!1.35e-19!91;CL:0000048!1.35e-19!91;CL:0000034!1.09e-18!97;CL:0000221!2.70e-15!44;CL:0000133!2.70e-15!44;CL:0000055!4.12e-15!50;CL:0002319!1.00e-14!43;CL:0000063!3.30e-13!66;CL:0000393!3.94e-12!39;CL:0000211!3.94e-12!39;CL:0000540!4.15e-12!33;CL:0000047!4.15e-12!33;CL:0000031!4.15e-12!33;CL:0000404!4.15e-12!33;CL:0000117!1.72e-10!23;CL:0000337!1.72e-10!23;CL:0000066!2.17e-08!25;CL:0000219!1.62e-07!54|ontology_enrichment_celltype_v019_2=CL:0002321,1.61e-31,70;CL:0000221,2.70e-20,44;CL:0000133,2.70e-20,44;CL:0000723,2.26e-19,91;CL:0000048,2.26e-19,91;CL:0002319,2.63e-19,43;CL:0000034,2.64e-17,97;CL:0000393,4.85e-16,39;CL:0000211,4.85e-16,39;CL:0000540,8.31e-16,33;CL:0000047,8.31e-16,33;CL:0000031,8.31e-16,33;CL:0000404,8.31e-16,33;CL:0000117,1.15e-14,23;CL:0000337,1.15e-14,23;CL:0000066,1.57e-13,25;CL:0002076,1.10e-10,15;CL:0000223,2.67e-10,20;CL:0000473,7.38e-09,7;CL:0000075,3.45e-08,7;CL:0002563,2.84e-07,9;CL:0002251,2.84e-07,9;CL:0000239,3.73e-07,6;CL:0000677,3.73e-07,6;CL:0000584,3.73e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!6.76e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.68e-08,73;UBERON:0000344,1.47e-07,15;UBERON:0001242,2.32e-07,13;UBERON:0001262,2.32e-07,13;UBERON:0004786,2.32e-07,13;UBERON:0000485,2.45e-07,11;UBERON:0001016,2.54e-07,75;UBERON:0003350,2.84e-07,9;UBERON:0004808,2.84e-07,9;UBERON:0001277,2.84e-07,9|phase1_expression=0.480446541314382,2.09385244583617,7.73498706962211,1.51232105653415,13.5241847085514,2.18243053485457,2.33612640595526,0.774739940649458,0.422366166455,0.234064526321993,0,0.478632953972018,0.513602189793617,0.786783621770977,0.666219523631325,0.202475267389826,0.699561878128147,0.157731082679119,0.274228867211478,0.84877930359606,0.255129870453209,0.992909512008853,0.261199789138935,0.95995453676044,3.89995777814189,14.3557991028755,7.75371593086335,2.37018355954478,4.56056206695297,0.504060259519861,2.21730510655305,15.2407361630311,4.92051830067656,0,1.44425809875637,1.32987716286794,0.816677425049476,0.418531630736908,0.7813353445238,1.57057123192139,0.588231488031014,1.36609096991689,1.45653105909346,0,0.202753862439029,0.367093504323363,9.38869613217647,1.30815093828268,8.12838876117546,0.58328969722285,0.699932108126813,12.9377307928474,1.00669563634642,1.45072428402269,1.00828139742739,1.02903774414379,1.14613375975503,5.67239301505187,3.03474691289397,0.528990979272033,5.70448263155561,13.2149367506962,9.78224275722253,17.0980946283466,4.94433181283487,13.4991221839759,7.78960287347852,18.8266969607562,2.90330914463737,3.51015439662396,4.83747411108179,7.9982275633065,2.87129103237098,3.1847607795888,0.575072826109418,1.83843757322004,1.10115880999389,0.766124028511126,1.68967186581868,2.2420668914133,0.182975287204819,2.08365348222704,4.4669279840221,9.56696437053856,1.83357897332172,1.47314292736834,1.85083185038834,2.60959224155421,0.151452386666368,0,0,0.860423876981386,4.75979933595425,8.09554787456726,0.649776417447669,0,0.702222100658759,0.340860645156116,3.63700406444016,1.41335829804136,4.3661460130771,2.56652954828636,0,7.11066703153331,3.89683873820185,1.01343946190039,3.0331466700887,0.22836775943812,0,0.148442139064825,0.520455980298408,0.304465478312141,0.230615497256059,0.60289056221049,0,0.251333182659351,0,0,0,0,0,0.484875253135222,0,0,0.209446706813455,0.255457055208591,0.359445373517761,0,0.254140454146129,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0,0.505445516867349,0,0.260240885925407,0.919608417733892,0.180062129805349,0.30140963567143,0.0680364991513279,0,0.562210347358373,0,0.431135985865684,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0.568326998791185,0.621377317606506,0,0.540186184383045,0.473489471170421,0,0.308534225774757,0.697601834251224,0,0.233530684734339,0.16455984991348,0.492502392237286,0,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0.264450566663544,0,0.696710015581316,0,0.403367049246685,0,0,0.949058123089023,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0.216138049874694,0,0.379335801906163,0.456994050438915,0,0,0.387904974335251,0,0,0,0.156998727841375,0,0.296452627087149,0,0,0,0.608580364165509,0.241177159752417,0.763877555344259,0,0.324270453550071,1.09824565275233,15.814502718009,0,0.624075346229121,0,0,0.482443521363367,0,1.70542270593436,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0.491589944147214,0,0,3.01582567878545,1.08781136763742,0,0,0.160550589987792,0,0.983609672260053,0,1.26203287766503,1.56175497718655,0,0.955875191810208,0.445597348164788,1.13230612315533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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1400 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:15519933..15519937,- | |||
|id=chr8:15519933..15519937,- | |||
|ontology_enrichment_celltype=CL:0002371!3.40e-30!118;CL:0000144!3.39e-29!121;CL:0000012!3.39e-29!121;CL:0000548!3.70e-29!115;CL:0000004!3.70e-29!115;CL:0000255!3.70e-29!115;CL:0002321!2.01e-21!70;CL:0000220!2.01e-21!70;CL:0000723!1.35e-19!91;CL:0000048!1.35e-19!91;CL:0000034!1.09e-18!97;CL:0000221!2.70e-15!44;CL:0000133!2.70e-15!44;CL:0000055!4.12e-15!50;CL:0002319!1.00e-14!43;CL:0000063!3.30e-13!66;CL:0000393!3.94e-12!39;CL:0000211!3.94e-12!39;CL:0000540!4.15e-12!33;CL:0000047!4.15e-12!33;CL:0000031!4.15e-12!33;CL:0000404!4.15e-12!33;CL:0000117!1.72e-10!23;CL:0000337!1.72e-10!23;CL:0000066!2.17e-08!25;CL:0000219!1.62e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.61e-31,70;CL:0000221,2.70e-20,44;CL:0000133,2.70e-20,44;CL:0000723,2.26e-19,91;CL:0000048,2.26e-19,91;CL:0002319,2.63e-19,43;CL:0000034,2.64e-17,97;CL:0000393,4.85e-16,39;CL:0000211,4.85e-16,39;CL:0000540,8.31e-16,33;CL:0000047,8.31e-16,33;CL:0000031,8.31e-16,33;CL:0000404,8.31e-16,33;CL:0000117,1.15e-14,23;CL:0000337,1.15e-14,23;CL:0000066,1.57e-13,25;CL:0002076,1.10e-10,15;CL:0000223,2.67e-10,20;CL:0000473,7.38e-09,7;CL:0000075,3.45e-08,7;CL:0002563,2.84e-07,9;CL:0002251,2.84e-07,9;CL:0000239,3.73e-07,6;CL:0000677,3.73e-07,6;CL:0000584,3.73e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.76e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.68e-08,73;UBERON:0000344,1.47e-07,15;UBERON:0001242,2.32e-07,13;UBERON:0001262,2.32e-07,13;UBERON:0004786,2.32e-07,13;UBERON:0000485,2.45e-07,11;UBERON:0001016,2.54e-07,75;UBERON:0003350,2.84e-07,9;UBERON:0004808,2.84e-07,9;UBERON:0001277,2.84e-07,9 | |||
|phase1_expression=0.480446541314382,2.09385244583617,7.73498706962211,1.51232105653415,13.5241847085514,2.18243053485457,2.33612640595526,0.774739940649458,0.422366166455,0.234064526321993,0,0.478632953972018,0.513602189793617,0.786783621770977,0.666219523631325,0.202475267389826,0.699561878128147,0.157731082679119,0.274228867211478,0.84877930359606,0.255129870453209,0.992909512008853,0.261199789138935,0.95995453676044,3.89995777814189,14.3557991028755,7.75371593086335,2.37018355954478,4.56056206695297,0.504060259519861,2.21730510655305,15.2407361630311,4.92051830067656,0,1.44425809875637,1.32987716286794,0.816677425049476,0.418531630736908,0.7813353445238,1.57057123192139,0.588231488031014,1.36609096991689,1.45653105909346,0,0.202753862439029,0.367093504323363,9.38869613217647,1.30815093828268,8.12838876117546,0.58328969722285,0.699932108126813,12.9377307928474,1.00669563634642,1.45072428402269,1.00828139742739,1.02903774414379,1.14613375975503,5.67239301505187,3.03474691289397,0.528990979272033,5.70448263155561,13.2149367506962,9.78224275722253,17.0980946283466,4.94433181283487,13.4991221839759,7.78960287347852,18.8266969607562,2.90330914463737,3.51015439662396,4.83747411108179,7.9982275633065,2.87129103237098,3.1847607795888,0.575072826109418,1.83843757322004,1.10115880999389,0.766124028511126,1.68967186581868,2.2420668914133,0.182975287204819,2.08365348222704,4.4669279840221,9.56696437053856,1.83357897332172,1.47314292736834,1.85083185038834,2.60959224155421,0.151452386666368,0,0,0.860423876981386,4.75979933595425,8.09554787456726,0.649776417447669,0,0.702222100658759,0.340860645156116,3.63700406444016,1.41335829804136,4.3661460130771,2.56652954828636,0,7.11066703153331,3.89683873820185,1.01343946190039,3.0331466700887,0.22836775943812,0,0.148442139064825,0.520455980298408,0.304465478312141,0.230615497256059,0.60289056221049,0,0.251333182659351,0,0,0,0,0,0.484875253135222,0,0,0.209446706813455,0.255457055208591,0.359445373517761,0,0.254140454146129,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0,0.505445516867349,0,0.260240885925407,0.919608417733892,0.180062129805349,0.30140963567143,0.0680364991513279,0,0.562210347358373,0,0.431135985865684,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0.568326998791185,0.621377317606506,0,0.540186184383045,0.473489471170421,0,0.308534225774757,0.697601834251224,0,0.233530684734339,0.16455984991348,0.492502392237286,0,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0.264450566663544,0,0.696710015581316,0,0.403367049246685,0,0,0.949058123089023,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0.216138049874694,0,0.379335801906163,0.456994050438915,0,0,0.387904974335251,0,0,0,0.156998727841375,0,0.296452627087149,0,0,0,0.608580364165509,0.241177159752417,0.763877555344259,0,0.324270453550071,1.09824565275233,15.814502718009,0,0.624075346229121,0,0,0.482443521363367,0,1.70542270593436,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0.491589944147214,0,0,3.01582567878545,1.08781136763742,0,0,0.160550589987792,0,0.983609672260053,0,1.26203287766503,1.56175497718655,0,0.955875191810208,0.445597348164788,1.13230612315533,1.61924280669958,1.75353514746787,1.58115111178609,0.321321316421807,0,0,0.162886959353576,0.164970122972535,0,0.485561272309963,0.906970670894253,0,0,0,0.258428293168221,0,0,0,1.05418608574999,3.09406629744561,0,0.36012218806262,0.258717367565509,0.214337035031592,0,0.356737635204141,0.164549020602121,0.913394847343798,0.23467170806371,0.42366414172764,0.220528398054962,0,0,0,0,0,0,0,0,0.206386867963223,0,0.376736914009382,0,0.228778173206523,0.169978429993855,0.279902904647316,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0,1.04702376793612,0.388844919875379,0,0,0.299033092087958,0.330916980914195,0.194451188344048,0.129159823477731,0.506868376472335,0.117357238645754,0.5208175393758,0,0,0,0,0.608175645870493,0.513554785824136,0.389762468933385,0,0,0.120195449519969,0.147689527174577,0.504832249740738,0.0762068066549998,0.302478555410522,0.194915761479505,0.0962118416403295,0.116876902181569,0,0.665957860122194,0.269141569828427,0.167884616364078,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0.51776031175182,0.415149390336707,0,0.512200817262403,0.243106717068294,0,0.367687016900028,0.222246727801615,0,0,0,0,0,0,0,0.114870937911227,0,0,0.192909220463705,0,0,0.342869252385415,0,0.476872379894642,0.290692833264657,0,0,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0,0.999242311751784,0.467863216890817,0.429742108096597,0.191288332068843,0.220591419119515,0 | |||
|short_description=p@chr8:15519933..15519937,- | |||
}} |
Revision as of 15:17, 14 September 2013
Short description: | p@chr8:15519933..15519937, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:15519933..15519937, - |
Coexpression cluster: | MCL_coexpression_mm9:1400 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.61e-31 | 70 |
ectodermal cell | 2.70e-20 | 44 |
neurectodermal cell | 2.70e-20 | 44 |
somatic stem cell | 2.26e-19 | 91 |
multi fate stem cell | 2.26e-19 | 91 |
neural cell | 2.63e-19 | 43 |
stem cell | 2.64e-17 | 97 |
electrically responsive cell | 4.85e-16 | 39 |
electrically active cell | 4.85e-16 | 39 |
neuron | 8.31e-16 | 33 |
neuronal stem cell | 8.31e-16 | 33 |
neuroblast | 8.31e-16 | 33 |
electrically signaling cell | 8.31e-16 | 33 |
CNS neuron (sensu Vertebrata) | 1.15e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.15e-14 | 23 |
epithelial cell | 1.57e-13 | 25 |
endo-epithelial cell | 1.10e-10 | 15 |
endodermal cell | 2.67e-10 | 20 |
defensive cell | 7.38e-09 | 7 |
columnar/cuboidal epithelial cell | 3.45e-08 | 7 |
intestinal epithelial cell | 2.84e-07 | 9 |
epithelial cell of alimentary canal | 2.84e-07 | 9 |
brush border epithelial cell | 3.73e-07 | 6 |
gut absorptive cell | 3.73e-07 | 6 |
enterocyte | 3.73e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 9.68e-08 | 73 |
mucosa | 1.47e-07 | 15 |
intestinal mucosa | 2.32e-07 | 13 |
wall of intestine | 2.32e-07 | 13 |
gastrointestinal system mucosa | 2.32e-07 | 13 |
simple columnar epithelium | 2.45e-07 | 11 |
nervous system | 2.54e-07 | 75 |
epithelium of mucosa | 2.84e-07 | 9 |
gastrointestinal system epithelium | 2.84e-07 | 9 |
intestinal epithelium | 2.84e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.