FFCP PHASE1:Mm9::chr9:45595734..45595749,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=15|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:45595734..45595749,-|id=chr9:45595734..45595749,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002027,2.04e-18,3;CL:0002006,2.04e-18,3;CL:0002024,2.04e-18,3;CL:0000553,1.69e-09,6;CL:0000556,1.69e-09,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!3.67e-08!6;UBERON:0004457!3.67e-08!6;UBERON:0000042!3.67e-08!6;UBERON:0004854!3.67e-08!6;UBERON:0009034!3.67e-08!6;UBERON:0002095!3.67e-08!6;UBERON:0004782!3.67e-08!6;UBERON:0003281!3.67e-08!6;UBERON:0009664!3.67e-08!6;UBERON:0002296!3.67e-08!6;UBERON:0005602!3.67e-08!6;UBERON:0001179!3.67e-08!6;UBERON:0006293!3.67e-08!6;UBERON:0000981!1.49e-07!4;UBERON:0002495!1.49e-07!4;UBERON:0003608!1.49e-07!4;UBERON:0003826!1.49e-07!4;UBERON:0008202!1.49e-07!4;UBERON:0004375!1.49e-07!4;UBERON:0002428!1.49e-07!4;UBERON:0003464!1.49e-07!4;UBERON:0003606!1.49e-07!4;UBERON:0009749!1.49e-07!4;UBERON:0003860!1.49e-07!4;UBERON:0005856!1.49e-07!4;UBERON:0005866!1.49e-07!4;UBERON:0007828!1.49e-07!4;UBERON:0005254!1.49e-07!4;UBERON:0001271!1.49e-07!4;UBERON:0002091!1.49e-07!4;UBERON:0001464!1.49e-07!4;UBERON:0003285!1.49e-07!4;UBERON:0010129!1.49e-07!4;UBERON:0006234!1.49e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.14e-25,6;UBERON:0004457,3.14e-25,6;UBERON:0000042,3.14e-25,6;UBERON:0004854,3.14e-25,6;UBERON:0009034,3.14e-25,6;UBERON:0002095,3.14e-25,6;UBERON:0004782,3.14e-25,6;UBERON:0003281,3.14e-25,6;UBERON:0009664,3.14e-25,6;UBERON:0002296,3.14e-25,6;UBERON:0005602,3.14e-25,6;UBERON:0001179,3.14e-25,6;UBERON:0006293,3.14e-25,6;UBERON:0003887,3.84e-15,10;UBERON:0005172,5.94e-11,49;UBERON:0005173,5.94e-11,49;UBERON:0002417,5.94e-11,49;UBERON:0000916,5.94e-11,49;UBERON:0000945,1.96e-09,16;UBERON:0010039,1.96e-09,16;UBERON:0002075,6.33e-08,19;UBERON:0009569,8.26e-08,66;UBERON:0002390,9.60e-08,45;UBERON:0003061,9.60e-08,45;UBERON:0002193,3.33e-07,48;UBERON:0002405,3.33e-07,48|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99798785634096,4.25198061518635,1.39912375625629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23517741427141,0,0,0,0.884610551949874,0.647067399789637,0.662524555381181,3.39412677194655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995255764880744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590292695242212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0.674586337154561,0.608580364165509,0.241177159752417,1.52775511068852,1.72617682470486,3.56697498905078,2.47105271869273,0,1.11642284300551,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0,0,0.214337035031592,0.354680467284547,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,2.56306321196779,0,1.29636169158798,7.72310673719233,9.02181902958766,4.34678529092393,0,0,0,0,0,0,0,0,0,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419226325255965,0.183843508450014,0.666740183404846,0.412070114477788,0.64183841918363,0.252697211763798,0,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0.238436189947321,0,0.0941093804153306,0,0,0.263069711437843,0.407412341537585,0.561142271657738,0.118635018124174,0.0985044823755635,0,0,0.578719832943424,0,0,0,0.191288332068843,1.10295709559758,0.463735671240843|short_description=p@chr9:45595734..45595749,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:45595734..45595749,- | |||
|id=chr9:45595734..45595749,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,2.04e-18,3;CL:0002006,2.04e-18,3;CL:0002024,2.04e-18,3;CL:0000553,1.69e-09,6;CL:0000556,1.69e-09,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!3.67e-08!6;UBERON:0004457!3.67e-08!6;UBERON:0000042!3.67e-08!6;UBERON:0004854!3.67e-08!6;UBERON:0009034!3.67e-08!6;UBERON:0002095!3.67e-08!6;UBERON:0004782!3.67e-08!6;UBERON:0003281!3.67e-08!6;UBERON:0009664!3.67e-08!6;UBERON:0002296!3.67e-08!6;UBERON:0005602!3.67e-08!6;UBERON:0001179!3.67e-08!6;UBERON:0006293!3.67e-08!6;UBERON:0000981!1.49e-07!4;UBERON:0002495!1.49e-07!4;UBERON:0003608!1.49e-07!4;UBERON:0003826!1.49e-07!4;UBERON:0008202!1.49e-07!4;UBERON:0004375!1.49e-07!4;UBERON:0002428!1.49e-07!4;UBERON:0003464!1.49e-07!4;UBERON:0003606!1.49e-07!4;UBERON:0009749!1.49e-07!4;UBERON:0003860!1.49e-07!4;UBERON:0005856!1.49e-07!4;UBERON:0005866!1.49e-07!4;UBERON:0007828!1.49e-07!4;UBERON:0005254!1.49e-07!4;UBERON:0001271!1.49e-07!4;UBERON:0002091!1.49e-07!4;UBERON:0001464!1.49e-07!4;UBERON:0003285!1.49e-07!4;UBERON:0010129!1.49e-07!4;UBERON:0006234!1.49e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.14e-25,6;UBERON:0004457,3.14e-25,6;UBERON:0000042,3.14e-25,6;UBERON:0004854,3.14e-25,6;UBERON:0009034,3.14e-25,6;UBERON:0002095,3.14e-25,6;UBERON:0004782,3.14e-25,6;UBERON:0003281,3.14e-25,6;UBERON:0009664,3.14e-25,6;UBERON:0002296,3.14e-25,6;UBERON:0005602,3.14e-25,6;UBERON:0001179,3.14e-25,6;UBERON:0006293,3.14e-25,6;UBERON:0003887,3.84e-15,10;UBERON:0005172,5.94e-11,49;UBERON:0005173,5.94e-11,49;UBERON:0002417,5.94e-11,49;UBERON:0000916,5.94e-11,49;UBERON:0000945,1.96e-09,16;UBERON:0010039,1.96e-09,16;UBERON:0002075,6.33e-08,19;UBERON:0009569,8.26e-08,66;UBERON:0002390,9.60e-08,45;UBERON:0003061,9.60e-08,45;UBERON:0002193,3.33e-07,48;UBERON:0002405,3.33e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99798785634096,4.25198061518635,1.39912375625629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23517741427141,0,0,0,0.884610551949874,0.647067399789637,0.662524555381181,3.39412677194655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995255764880744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590292695242212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0.674586337154561,0.608580364165509,0.241177159752417,1.52775511068852,1.72617682470486,3.56697498905078,2.47105271869273,0,1.11642284300551,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0,0,0.214337035031592,0.354680467284547,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,2.56306321196779,0,1.29636169158798,7.72310673719233,9.02181902958766,4.34678529092393,0,0,0,0,0,0,0,0,0,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419226325255965,0.183843508450014,0.666740183404846,0.412070114477788,0.64183841918363,0.252697211763798,0,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0.238436189947321,0,0.0941093804153306,0,0,0.263069711437843,0.407412341537585,0.561142271657738,0.118635018124174,0.0985044823755635,0,0,0.578719832943424,0,0,0,0.191288332068843,1.10295709559758,0.463735671240843 | |||
|short_description=p@chr9:45595734..45595749,- | |||
}} |
Revision as of 18:01, 14 September 2013
Short description: | p@chr9:45595734..45595749, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:45595734..45595749, - |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 2.04e-18 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 2.04e-18 | 3 |
Kit-positive megakaryocyte progenitor cell | 2.04e-18 | 3 |
megakaryocyte progenitor cell | 1.69e-09 | 6 |
megakaryocyte | 1.69e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.14e-25 | 6 |
cavity lining | 3.14e-25 | 6 |
serous membrane | 3.14e-25 | 6 |
gastrointestinal system mesentery | 3.14e-25 | 6 |
stomach region | 3.14e-25 | 6 |
mesentery | 3.14e-25 | 6 |
gastrointestinal system serosa | 3.14e-25 | 6 |
mesentery of stomach | 3.14e-25 | 6 |
gut mesentery | 3.14e-25 | 6 |
dorsal mesentery | 3.14e-25 | 6 |
dorsal mesogastrium | 3.14e-25 | 6 |
peritoneal cavity | 3.14e-25 | 6 |
spleen primordium | 3.14e-25 | 6 |
intraembryonic coelom | 3.84e-15 | 10 |
abdomen element | 5.94e-11 | 49 |
abdominal segment element | 5.94e-11 | 49 |
abdominal segment of trunk | 5.94e-11 | 49 |
abdomen | 5.94e-11 | 49 |
stomach | 1.96e-09 | 16 |
food storage organ | 1.96e-09 | 16 |
viscus | 6.33e-08 | 19 |
subdivision of trunk | 8.26e-08 | 66 |
hematopoietic system | 9.60e-08 | 45 |
blood island | 9.60e-08 | 45 |
hemolymphoid system | 3.33e-07 | 48 |
immune system | 3.33e-07 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.