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FFCP PHASE1:Mm9::chr9:63605978..63605997,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=17127|HGNC=|UniProt=|association_with_transcript=-60bp_to_uc009qbj.1_5end|description=CAGE_peak_2_at_Smad3_5end|id=chr9:63605978..63605997,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000072!1.57e-09!27;UBERON:0002370!1.32e-08!23;UBERON:0000974!1.32e-08!23;UBERON:0004807!1.32e-08!23;UBERON:0005058!1.32e-08!23;UBERON:0003351!1.32e-08!23;UBERON:0009113!1.32e-08!23;UBERON:0003295!1.32e-08!23;UBERON:0009722!1.32e-08!23;UBERON:0005562!1.32e-08!23;UBERON:0007690!1.32e-08!23;UBERON:0006562!5.50e-08!24;UBERON:0001557!5.50e-08!24;UBERON:0001042!5.50e-08!24;UBERON:0008814!5.50e-08!24;UBERON:0009145!5.50e-08!24;UBERON:0000065!1.31e-07!41;UBERON:0003408!1.57e-07!24;UBERON:0001004!6.78e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0000072,1.31e-09,27;UBERON:0002370,1.11e-08,23;UBERON:0000974,1.11e-08,23;UBERON:0004807,1.11e-08,23;UBERON:0005058,1.11e-08,23;UBERON:0003351,1.11e-08,23;UBERON:0009113,1.11e-08,23;UBERON:0003295,1.11e-08,23;UBERON:0009722,1.11e-08,23;UBERON:0005562,1.11e-08,23;UBERON:0007690,1.11e-08,23;UBERON:0006562,4.65e-08,24;UBERON:0001557,4.65e-08,24;UBERON:0001042,4.65e-08,24;UBERON:0008814,4.65e-08,24;UBERON:0009145,4.65e-08,24;UBERON:0000065,1.15e-07,41;UBERON:0003408,1.28e-07,24;UBERON:0001004,5.82e-07,42|phase1_expression=2.88267924788629,8.02643437570531,4.09499315450582,16.6355316218757,23.5420993074783,4.36486106970913,1.86890112476421,7.23090611272827,27.87616698603,16.6185813688615,9.93064215707929,6.54131703761759,5.30722262786738,6.29426897416781,2.99798785634096,0.809901069559304,0.699561878128147,4.41647031501533,1.50825876966313,4.66828616977833,3.99703463710028,2.87943758482567,1.04479915655574,1.11994695955385,3.89995777814189,6.89078356938024,1.7230479846363,3.66301095566011,4.18051522804023,4.78857246543868,1.10865255327652,1.90509202037889,7.38077745101484,0,3.75507105676657,2.99222361645286,2.85837098767317,8.37063261473815,0.7813353445238,5.75876118371178,11.1763982725893,11.6117732442936,4.85510353031154,1.1330713617802,2.83855407414641,6.05704282133549,2.34717403304412,1.09012578190223,1.31811709640683,3.30530828426282,2.09979632438044,1.43752564364972,9.06026072711776,11.6057942721815,8.73843877770406,5.91696702882678,0.85960031981627,4.64104883049698,1.01158230429799,1.5869729378161,1.90149421051854,2.37191172448392,2.66788438833342,2.6996991518442,1.97773272513395,4.2628806896766,2.09720077362883,2.30530983192933,2.59224030771194,2.02508907497536,1.68259969081106,2.57085885963423,1.32521124570968,2.69479758272899,3.35459148563827,1.83843757322004,3.30347642998166,2.55374676170375,1.84327839907492,0.791317726381163,2.10421580285542,2.08365348222704,0.558365998002762,1.12552522006336,2.90316670775939,3.24091444021034,3.84403538157578,3.91438836233131,3.48340489332647,2.19157524309678,7.8263411949453,3.44169550792555,2.03991400112325,2.15881276655127,0.649776417447669,0.448026887097336,1.40444420131752,2.21559419351475,1.29893002301434,4.24007489412408,2.11265129665021,6.41632387071589,2.54805239706646,0,6.71122227134764,8.10751569520315,9.0994400102661,1.1418387971906,2.58937883647172,3.71105347662062,1.73485326766136,0.913396434936424,0.922461989024234,0.904335843315735,0.823120949949934,1.50799909595611,2.96633961281249,1.87979163995885,1.76922110389975,2.58826959915855,1.54589062922275,1.45462575940567,5.59175283654366,2.04946557908083,2.72280718857492,3.32094171771169,4.67278985573089,2.99951365496704,2.1601938602421,1.19832511523858,9.60751265919116,4.77486538028885,3.65031072403781,3.58001640262463,1.87009240103604,2.43361894601636,2.24046600470696,2.11491850037158,3.0326731012041,1.26265113531884,6.11566081924707,2.98872735763515,6.48223667299257,2.26057226753573,2.99360596265843,1.92170580427275,2.62364828767241,1.03481348295606,8.40715172438085,8.69887968771969,9.32540958068929,4.82230611340665,3.33656699070717,3.83077383174383,2.05782136407943,7.16523360546575,0,1.54408744268829,0.568326998791185,4.34964122324554,3.04883877975425,3.06105504483725,4.7348947117042,1.96764231747404,2.1597395804233,2.79040733700489,0.536546802799238,2.21854150497622,2.30383789878873,0.985004784474571,1.29710095273369,1.46199987425332,0.878200461164203,1.34206418760372,5.46753866266731,1.3377599609307,6.93879444265976,2.11560453330835,2.98603550749328,2.09013004674395,4.12375876230699,4.63872106633688,4.22518283305254,4.75564065281398,4.74529061544512,2.30578536613615,3.51869292320377,2.78539060857611,4.28920991662064,8.08937467788799,2.16138049874694,4.18196673834171,4.93136542478012,3.19895835307241,4.50830942692322,2.03651327845314,4.46090720485539,4.9095073923223,4.55303067294652,2.95220295959204,2.04098346193787,2.34454611451421,2.07516838961004,2.33583148002532,2.35870794135844,3.14806957338795,1.62288097110802,2.17059443777175,0.763877555344259,2.01387296215567,1.13494658742525,0.549122826376163,0,0.744281895337007,4.05648975048929,1.2628943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|EntrezGene=17127
|HGNC=
|UniProt=
|association_with_transcript=-60bp_to_uc009qbj.1_5end
|description=CAGE_peak_2_at_Smad3_5end
|id=chr9:63605978..63605997,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000072!1.57e-09!27;UBERON:0002370!1.32e-08!23;UBERON:0000974!1.32e-08!23;UBERON:0004807!1.32e-08!23;UBERON:0005058!1.32e-08!23;UBERON:0003351!1.32e-08!23;UBERON:0009113!1.32e-08!23;UBERON:0003295!1.32e-08!23;UBERON:0009722!1.32e-08!23;UBERON:0005562!1.32e-08!23;UBERON:0007690!1.32e-08!23;UBERON:0006562!5.50e-08!24;UBERON:0001557!5.50e-08!24;UBERON:0001042!5.50e-08!24;UBERON:0008814!5.50e-08!24;UBERON:0009145!5.50e-08!24;UBERON:0000065!1.31e-07!41;UBERON:0003408!1.57e-07!24;UBERON:0001004!6.78e-07!42
|ontology_enrichment_uberon_v019_2=UBERON:0000072,1.31e-09,27;UBERON:0002370,1.11e-08,23;UBERON:0000974,1.11e-08,23;UBERON:0004807,1.11e-08,23;UBERON:0005058,1.11e-08,23;UBERON:0003351,1.11e-08,23;UBERON:0009113,1.11e-08,23;UBERON:0003295,1.11e-08,23;UBERON:0009722,1.11e-08,23;UBERON:0005562,1.11e-08,23;UBERON:0007690,1.11e-08,23;UBERON:0006562,4.65e-08,24;UBERON:0001557,4.65e-08,24;UBERON:0001042,4.65e-08,24;UBERON:0008814,4.65e-08,24;UBERON:0009145,4.65e-08,24;UBERON:0000065,1.15e-07,41;UBERON:0003408,1.28e-07,24;UBERON:0001004,5.82e-07,42
|phase1_expression=2.88267924788629,8.02643437570531,4.09499315450582,16.6355316218757,23.5420993074783,4.36486106970913,1.86890112476421,7.23090611272827,27.87616698603,16.6185813688615,9.93064215707929,6.54131703761759,5.30722262786738,6.29426897416781,2.99798785634096,0.809901069559304,0.699561878128147,4.41647031501533,1.50825876966313,4.66828616977833,3.99703463710028,2.87943758482567,1.04479915655574,1.11994695955385,3.89995777814189,6.89078356938024,1.7230479846363,3.66301095566011,4.18051522804023,4.78857246543868,1.10865255327652,1.90509202037889,7.38077745101484,0,3.75507105676657,2.99222361645286,2.85837098767317,8.37063261473815,0.7813353445238,5.75876118371178,11.1763982725893,11.6117732442936,4.85510353031154,1.1330713617802,2.83855407414641,6.05704282133549,2.34717403304412,1.09012578190223,1.31811709640683,3.30530828426282,2.09979632438044,1.43752564364972,9.06026072711776,11.6057942721815,8.73843877770406,5.91696702882678,0.85960031981627,4.64104883049698,1.01158230429799,1.5869729378161,1.90149421051854,2.37191172448392,2.66788438833342,2.6996991518442,1.97773272513395,4.2628806896766,2.09720077362883,2.30530983192933,2.59224030771194,2.02508907497536,1.68259969081106,2.57085885963423,1.32521124570968,2.69479758272899,3.35459148563827,1.83843757322004,3.30347642998166,2.55374676170375,1.84327839907492,0.791317726381163,2.10421580285542,2.08365348222704,0.558365998002762,1.12552522006336,2.90316670775939,3.24091444021034,3.84403538157578,3.91438836233131,3.48340489332647,2.19157524309678,7.8263411949453,3.44169550792555,2.03991400112325,2.15881276655127,0.649776417447669,0.448026887097336,1.40444420131752,2.21559419351475,1.29893002301434,4.24007489412408,2.11265129665021,6.41632387071589,2.54805239706646,0,6.71122227134764,8.10751569520315,9.0994400102661,1.1418387971906,2.58937883647172,3.71105347662062,1.73485326766136,0.913396434936424,0.922461989024234,0.904335843315735,0.823120949949934,1.50799909595611,2.96633961281249,1.87979163995885,1.76922110389975,2.58826959915855,1.54589062922275,1.45462575940567,5.59175283654366,2.04946557908083,2.72280718857492,3.32094171771169,4.67278985573089,2.99951365496704,2.1601938602421,1.19832511523858,9.60751265919116,4.77486538028885,3.65031072403781,3.58001640262463,1.87009240103604,2.43361894601636,2.24046600470696,2.11491850037158,3.0326731012041,1.26265113531884,6.11566081924707,2.98872735763515,6.48223667299257,2.26057226753573,2.99360596265843,1.92170580427275,2.62364828767241,1.03481348295606,8.40715172438085,8.69887968771969,9.32540958068929,4.82230611340665,3.33656699070717,3.83077383174383,2.05782136407943,7.16523360546575,0,1.54408744268829,0.568326998791185,4.34964122324554,3.04883877975425,3.06105504483725,4.7348947117042,1.96764231747404,2.1597395804233,2.79040733700489,0.536546802799238,2.21854150497622,2.30383789878873,0.985004784474571,1.29710095273369,1.46199987425332,0.878200461164203,1.34206418760372,5.46753866266731,1.3377599609307,6.93879444265976,2.11560453330835,2.98603550749328,2.09013004674395,4.12375876230699,4.63872106633688,4.22518283305254,4.75564065281398,4.74529061544512,2.30578536613615,3.51869292320377,2.78539060857611,4.28920991662064,8.08937467788799,2.16138049874694,4.18196673834171,4.93136542478012,3.19895835307241,4.50830942692322,2.03651327845314,4.46090720485539,4.9095073923223,4.55303067294652,2.95220295959204,2.04098346193787,2.34454611451421,2.07516838961004,2.33583148002532,2.35870794135844,3.14806957338795,1.62288097110802,2.17059443777175,0.763877555344259,2.01387296215567,1.13494658742525,0.549122826376163,0,0.744281895337007,4.05648975048929,1.26289438973556,1.25578189465339,0.964887042726734,2.40179147216586,4.73728529426212,3.42226450528254,2.20668611507745,3.52035372432753,3.1826188913945,2.85652369063216,4.48807390072937,1.57635144106191,1.7717175171902,3.18909537314974,1.96635977658886,4.31712454664739,2.89298117163023,1.50791283939272,0.54390568381871,4.42587845717133,3.86311444826625,1.28440471990234,0.937693492737625,0.983609672260053,1.76729649043061,5.67914794949262,3.51394869866975,4.95473814785438,5.73525115086125,2.89638276307112,3.67999490025482,5.66734982344852,3.50707029493574,3.16230222357219,5.78378369559253,3.97432238583152,4.45164009168138,2.93196526836437,1.64970122972535,3.98235415019888,2.91336763385978,5.74414758233027,2.64047111658257,5.31543407185391,4.61152721915891,2.32585463851399,2.90826983582004,6.06045543254026,3.79244109522979,0,2.06271086496374,7.48967132658334,5.76195500900193,4.2688365648309,3.64372959553707,3.01478397191865,1.42695054081656,3.78462747384878,4.26250928760439,0.704015124191131,2.75381692122966,0.441056796109924,2.30840754118072,2.26050197374268,2.35220407219808,1.79058516004705,1.80554989719567,2.62332752966866,0.927126510052548,1.87957968877638,4.54051109519089,1.66675074632741,1.88368457004691,2.05041341581538,1.60144721244566,9.68877050964975,9.23679585336143,9.95039811391851,0.954670618015114,5.06137589729817,2.64315307264903,2.48412283890143,2.92723614420256,2.62035076495413,1.21377911746339,2.0663363931334,1.57053565190418,2.59229946583586,0.621339313086926,0,4.78452947340732,4.30192075188454,2.52786544847262,3.35815541042101,2.19642963138012,2.58185925020659,3.77592716047455,1.78260885523708,0.724752362478018,1.15212002503146,4.74016680942267,2.63542779877213,4.21114924375792,6.23619950293416,8.05620130503666,11.7221999320946,6.97133607215819,8.4183030489509,8.88504759543699,6.78240579229499,6.85618058930516,5.26272555994663,7.88937101450702,5.2594605981706,2.0405734525369,6.88156455459601,3.05027112472217,3.8613461763738,3.09103350451505,2.25218970541418,2.01466786693992,1.71494703263253,2.00628841614145,1.6942555278512,2.76195141904306,2.29158205375759,0.859265911718438,1.37016503954128,7.55393897389701,7.42524750254986,5.85417564191487,3.62513927187364,4.14208249401456,5.91587881229807,4.38927360741134,4.43907374960749,2.67417388775123,2.30574478890781,2.38996560985018,1.77797382241292,2.26638562962784,1.28367683836726,1.26348605881899,2.28131369901216,1.88626341386076,2.34103768674706,2.24088033417042,3.21638626151434,1.90517476513229,2.54945517078682,3.08654752741928,3.29668720642645,2.94397840268795,1.02860775715625,1.59728225543404,2.14592570952589,1.45346416632329,2.91739079287525,2.11536519729191,2.74391959309159,2.10455769150274,3.39510284614654,2.24456908663095,3.08451047122853,2.1670986122624,2.45538625901814,1.85924209423159,2.70069255373598,3.49734809113124,2.8071793013449,3.00819475667618,3.82576664137687,1.76473135295612,2.08681052058379
|short_description=p2@Smad3
}}

Revision as of 18:29, 14 September 2013

Short description:p2@Smad3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Smad3_5end
Coexpression cluster:NA
Association with transcript: -60bp_to_uc009qbj.1_5end
EntrezGene:Smad3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Smad3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I58.03
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I316.64
CD326+ enterocyte, pool2.CNhs13197.11849-124I423.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.36
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E97.23
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E727.88
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F216.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E69.93
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.54
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.31
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.29
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.51
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.67
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.88
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.90
GP2+ M cell, pool1.CNhs13228.11845-124H96.89
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I23.66
Ileum epithelium, pool1.CNhs13199.10252-104B94.18
Ileum epithelium, pool2.CNhs13232.10253-104C14.79
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G67.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.76
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G88.37
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H211.61
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.86
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.84
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.06
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.31
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A29.06
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I911.61
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A18.74
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.92
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.59
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.35
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.90
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.91
Mouse Schwann, donor1.CNhs12507.11728-123D93.48
Mouse Schwann, donor2.CNhs12573.11746-123F92.19
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.83
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.24
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.71
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G28.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.10
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H92.59
adrenal gland, adult.CNhs10508.49-24D73.71
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A82.97
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F52.59
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H73.32
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.67
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.16
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D89.61
corpus striatum, neonate N00.CNhs11226.630-43F14.77
cortex, adult.CNhs10473.12-14D53.65
cortex, neonate N30.CNhs11107.1392-42F23.58
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.24
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.11
epididymis, adult.CNhs10490.58-23B23.03
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C66.12
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C96.48
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C62.99
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G82.62
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E28.41
forelimb, embryo E12.CNhs10600.359-14H28.70
forelimb, embryo E13.CNhs10589.384-1E29.33
forelimb, embryo E14.CNhs10577.413-26A84.82
forelimb, embryo E15.CNhs11007.437-20E73.34
forelimb, embryo E17.CNhs10598.1517-43C43.83
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I67.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E94.35
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I93.06
heart, embryo E14.CNhs10597.403-26D44.73
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C62.16
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E32.22
heart, neonate N03.CNhs11221.1349-25I22.30
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G11.30
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.34
hippocampus, adult.CNhs10478.13-16E85.47
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I36.94
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I52.99
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D84.12
intestine, embryo E16.CNhs10585.463-22H44.64
intestine, embryo E17.CNhs10582.482-18D34.23
intestine, embryo E18.CNhs10526.1289-20F74.76
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E92.31
intestine, neonate N06.CNhs11102.688-20B83.52
intestine, neonate N07.CNhs11095.720-20F22.79
intestine, neonate N10.CNhs11098.755-23A54.29
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G14.18
kidney, embryo E14.CNhs10606.411-4I94.93
kidney, embryo E15.CNhs10997.434-16F83.20
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C74.46
kidney, neonate N00.CNhs11214.646-21G74.91
kidney, neonate N10.CNhs11206.758-6D54.55
kidney, neonate N20.CNhs11113.832-19I12.95
kidney, neonate N25.CNhs11122.1353-25F32.04
kidney, neonate N30.CNhs11203.1385-42H12.34
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F82.34
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B94.06
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G24.74
lung, embryo E14.CNhs10604.404-26F83.42
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B63.52
lung, embryo E17.CNhs10605.480-44A63.18
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C64.49
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E63.19
lung, neonate N20.CNhs11109.822-18A41.97
lung, neonate N25.CNhs11119.1359-25C74.32
lung, neonate N30.CNhs11133.1394-42H22.89
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H23.86
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.68
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.95
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.74
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I95.78
ovary, adult.CNhs10507.91-2I73.97
ovary, embryo E18.CNhs11040.505-44H74.45
ovary, neonate N00.CNhs11217.1299-22I42.93
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F25.74
pancreas, embryo E16.CNhs11003.460-26E52.64
pancreas, embryo E17.CNhs10599.1558-45G35.32
pancreas, embryo E18.CNhs10580.1535-43I74.61
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G87.49
pituitary gland, embryo E12.CNhs11018.346-16E65.76
pituitary gland, embryo E13.CNhs11009.370-44C74.27
pituitary gland, embryo E14.CNhs11037.398-44A53.64
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F53.78
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G32.75
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C32.31
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H32.35
skin, neonate N06.CNhs11097.693-20I51.79
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C14.54
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D11.88
spleen, neonate N20.CNhs11112.824-19H12.05
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C99.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D39.95
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E35.06
stomach, embryo E15.CNhs10603.1252-16G82.64
stomach, embryo E16.CNhs11022.459-17D42.48
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A92.07
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I12.59
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F54.78
testis, embryo E15.CNhs11034.443-27C54.30
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I53.36
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B72.58
testis, neonate N07.CNhs11222.726-26I43.78
testis, neonate N10.CNhs11204.763-44D91.78
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B54.74
thymus, embryo E14.CNhs11041.402-44I42.64
thymus, embryo E15.CNhs11005.430-45I24.21
thymus, embryo E16.CNhs11002.456-26C56.24
thymus, embryo E17.CNhs10581.478-18C18.06
thymus, embryo E18.CNhs10595.1273-19G411.72
thymus, neonate N02.CNhs11181.1541-43F86.97
thymus, neonate N03.CNhs11137.2104-43C78.42
thymus, neonate N06.CNhs11197.681-26C48.89
thymus, neonate N07.CNhs11211.713-19D36.78
thymus, neonate N10.CNhs11194.748-24E46.86
thymus, neonate N20.CNhs11186.820-7A25.26
thymus, neonate N25.CNhs11125.1362-25G77.89
thymus, neonate N30.CNhs11132.1393-42G25.26
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.05
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.86
urinary bladder, adult.CNhs10481.879-12E43.09
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E52.01
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I85.92
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H24.44
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.22
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.92
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C63.83
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B42.09





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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