FFCP PHASE1:Mm9::chr9:65260578..65260603,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=131|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:65260578..65260603,+|id=chr9:65260578..65260603,+|ontology_enrichment_celltype=CL:0000239!4.68e-12!6;CL:0000677!4.68e-12!6;CL:0000212!4.68e-12!6;CL:0000584!4.68e-12!6;CL:0000075!3.18e-10!7;CL:0002563!8.82e-08!9;CL:0002251!8.82e-08!9|ontology_enrichment_celltype_v019_2=CL:0000239,2.04e-07,6;CL:0000677,2.04e-07,6;CL:0000584,2.04e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.00e-23!43;UBERON:0000344!9.90e-19!15;UBERON:0005409!2.70e-18!59;UBERON:0001242!7.42e-15!13;UBERON:0000060!7.42e-15!13;UBERON:0001262!7.42e-15!13;UBERON:0004786!7.42e-15!13;UBERON:0004923!1.26e-10!24;UBERON:0001007!1.97e-09!128;UBERON:0001555!1.97e-09!128;UBERON:0007026!1.97e-09!128;UBERON:0004119!3.60e-09!130;UBERON:0000925!3.60e-09!130;UBERON:0006595!3.60e-09!130;UBERON:0000331!4.16e-08!3;UBERON:0002116!4.16e-08!3;UBERON:0001204!4.16e-08!3;UBERON:0001168!4.16e-08!3;UBERON:0004921!7.21e-08!126;UBERON:0004185!7.21e-08!126;UBERON:0003350!8.82e-08!9;UBERON:0004808!8.82e-08!9;UBERON:0001277!8.82e-08!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.32e-32,31;UBERON:0005409,2.61e-20,47;UBERON:0002108,4.44e-20,4;UBERON:0000344,1.36e-19,15;UBERON:0000331,7.90e-16,3;UBERON:0002116,7.90e-16,3;UBERON:0001204,7.90e-16,3;UBERON:0001168,7.90e-16,3;UBERON:0001242,6.21e-13,13;UBERON:0001262,6.21e-13,13;UBERON:0004786,6.21e-13,13;UBERON:0004923,7.05e-12,24;UBERON:0001962,1.29e-10,2;UBERON:0001961,1.29e-10,2;UBERON:0001744,1.29e-10,2;UBERON:0001007,2.68e-09,116;UBERON:0001555,2.68e-09,116;UBERON:0007026,2.68e-09,116;UBERON:0004119,4.28e-09,118;UBERON:0000925,4.28e-09,118;UBERON:0006595,4.28e-09,118;UBERON:0002465,2.36e-07,3;UBERON:0004921,5.58e-07,114|phase1_expression=0,1.04692622291808,2.27499619694768,2.11724947914781,0.500895729946347,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03985603307473,2.2940928106717,0.57423196411502,0,2.58565479223067,16.9120843316173,3.2763916868791,6.65191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0,0.201683524623343,0,0.380451252225118,2.84717436926707,6.42325923423642,1.50801125280162,1.39269530428806,1.36474860983384,1.79763881730844,1.08069024937347,0.597423819763102,0,0,0,0.814605311381257,0.387904974335251,0,0,1.03327103585722,0.941992367048249,0.987177311374404,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0,0,0,0.90730481304255,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0.192906610981141,0,0,0.429742108096597,0,0,0|short_description=p@chr9:65260578..65260603,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=131 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:65260578..65260603,+ | |||
|id=chr9:65260578..65260603,+ | |||
|ontology_enrichment_celltype=CL:0000239!4.68e-12!6;CL:0000677!4.68e-12!6;CL:0000212!4.68e-12!6;CL:0000584!4.68e-12!6;CL:0000075!3.18e-10!7;CL:0002563!8.82e-08!9;CL:0002251!8.82e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.04e-07,6;CL:0000677,2.04e-07,6;CL:0000584,2.04e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.00e-23!43;UBERON:0000344!9.90e-19!15;UBERON:0005409!2.70e-18!59;UBERON:0001242!7.42e-15!13;UBERON:0000060!7.42e-15!13;UBERON:0001262!7.42e-15!13;UBERON:0004786!7.42e-15!13;UBERON:0004923!1.26e-10!24;UBERON:0001007!1.97e-09!128;UBERON:0001555!1.97e-09!128;UBERON:0007026!1.97e-09!128;UBERON:0004119!3.60e-09!130;UBERON:0000925!3.60e-09!130;UBERON:0006595!3.60e-09!130;UBERON:0000331!4.16e-08!3;UBERON:0002116!4.16e-08!3;UBERON:0001204!4.16e-08!3;UBERON:0001168!4.16e-08!3;UBERON:0004921!7.21e-08!126;UBERON:0004185!7.21e-08!126;UBERON:0003350!8.82e-08!9;UBERON:0004808!8.82e-08!9;UBERON:0001277!8.82e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.32e-32,31;UBERON:0005409,2.61e-20,47;UBERON:0002108,4.44e-20,4;UBERON:0000344,1.36e-19,15;UBERON:0000331,7.90e-16,3;UBERON:0002116,7.90e-16,3;UBERON:0001204,7.90e-16,3;UBERON:0001168,7.90e-16,3;UBERON:0001242,6.21e-13,13;UBERON:0001262,6.21e-13,13;UBERON:0004786,6.21e-13,13;UBERON:0004923,7.05e-12,24;UBERON:0001962,1.29e-10,2;UBERON:0001961,1.29e-10,2;UBERON:0001744,1.29e-10,2;UBERON:0001007,2.68e-09,116;UBERON:0001555,2.68e-09,116;UBERON:0007026,2.68e-09,116;UBERON:0004119,4.28e-09,118;UBERON:0000925,4.28e-09,118;UBERON:0006595,4.28e-09,118;UBERON:0002465,2.36e-07,3;UBERON:0004921,5.58e-07,114 | |||
|phase1_expression=0,1.04692622291808,2.27499619694768,2.11724947914781,0.500895729946347,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03985603307473,2.2940928106717,0.57423196411502,0,2.58565479223067,16.9120843316173,3.2763916868791,6.65191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0,0.201683524623343,0,0.380451252225118,2.84717436926707,6.42325923423642,1.50801125280162,1.39269530428806,1.36474860983384,1.79763881730844,1.08069024937347,0.597423819763102,0,0,0,0.814605311381257,0.387904974335251,0,0,1.03327103585722,0.941992367048249,0.987177311374404,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0,0,0,0.90730481304255,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0.192906610981141,0,0,0.429742108096597,0,0,0 | |||
|short_description=p@chr9:65260578..65260603,+ | |||
}} |
Revision as of 18:32, 14 September 2013
Short description: | p@chr9:65260578..65260603, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:65260578..65260603, + |
Coexpression cluster: | MCL_coexpression_mm9:131 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.04e-07 | 6 |
gut absorptive cell | 2.04e-07 | 6 |
enterocyte | 2.04e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.32e-32 | 31 |
gastrointestinal system | 2.61e-20 | 47 |
small intestine | 4.44e-20 | 4 |
mucosa | 1.36e-19 | 15 |
ileal mucosa | 7.90e-16 | 3 |
ileum | 7.90e-16 | 3 |
mucosa of small intestine | 7.90e-16 | 3 |
wall of small intestine | 7.90e-16 | 3 |
intestinal mucosa | 6.21e-13 | 13 |
wall of intestine | 6.21e-13 | 13 |
gastrointestinal system mucosa | 6.21e-13 | 13 |
organ component layer | 7.05e-12 | 24 |
gut-associated lymphoid tissue | 1.29e-10 | 2 |
mucosa-associated lymphoid tissue | 1.29e-10 | 2 |
lymphoid tissue | 1.29e-10 | 2 |
digestive system | 2.68e-09 | 116 |
digestive tract | 2.68e-09 | 116 |
primitive gut | 2.68e-09 | 116 |
endoderm-derived structure | 4.28e-09 | 118 |
endoderm | 4.28e-09 | 118 |
presumptive endoderm | 4.28e-09 | 118 |
lymphoid system | 2.36e-07 | 3 |
subdivision of digestive tract | 5.58e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.