FFCP PHASE1:Mm9::chrX:156380837..156380851,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=58194|HGNC=|MCL_coexpression_id=19|UniProt=|association_with_transcript=0bp_to_ENSMUST00000142426_5end|description=CAGE_peak_27_at_Sh3kbp1_5end|id=chrX:156380837..156380851,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!1.17e-22!18;UBERON:0000948!1.17e-22!18;UBERON:0005498!1.17e-22!18;UBERON:0004140!1.17e-22!18;UBERON:0009881!1.17e-22!18;UBERON:0004141!1.17e-22!18;UBERON:0003084!1.17e-22!18;UBERON:0007005!1.17e-22!18;UBERON:0004139!1.17e-22!18;UBERON:0004291!1.17e-22!18;UBERON:0004535!9.13e-17!23;UBERON:0001009!9.13e-17!23;UBERON:0004872!2.16e-10!33;UBERON:0003103!4.50e-08!43;UBERON:0003914!5.47e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.75e-72,18;UBERON:0000948,5.75e-72,18;UBERON:0005498,5.75e-72,18;UBERON:0004140,5.75e-72,18;UBERON:0009881,5.75e-72,18;UBERON:0004141,5.75e-72,18;UBERON:0003084,5.75e-72,18;UBERON:0007005,5.75e-72,18;UBERON:0004139,5.75e-72,18;UBERON:0004291,5.75e-72,18;UBERON:0004535,4.76e-56,23;UBERON:0001009,4.76e-56,23;UBERON:0004872,1.16e-38,33;UBERON:0003103,2.42e-29,43;UBERON:0003914,1.01e-26,47;UBERON:0003081,1.02e-13,87;UBERON:0010314,6.98e-13,92;UBERON:0000025,4.57e-10,114;UBERON:0000926,1.78e-09,120;UBERON:0004120,1.78e-09,120;UBERON:0006603,1.78e-09,120;UBERON:0004111,2.72e-09,122;UBERON:0001048,2.68e-08,134|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485300549842228,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,3.31401236056803,3.51789089971644,3.96136535214233,5.44512891845984,5.70616272067471,5.24508183817086,7.90615412151387,8.04820204198858,8.4071046504362,6.41783414662574,5.25335885053105,2.83740833410495,1.31579988682799,2.63460138349261,1.74468344388483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0,0.315270288212382,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0.252697211763798,0,0,0.280924522409647,0.0640251524048693,0.114870937911227,0.476293691283074,0.231768651889711,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0,0.145346416632329,0.282328141245992,0.169229215783353,0.548783918618318,0.526139422875686,0.407412341537585,0,0.593175090620871,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0|short_description=p27@Sh3kbp1}} | ||
|EntrezGene=58194 | |||
|HGNC= | |||
|MCL_coexpression_id=19 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000142426_5end | |||
|description=CAGE_peak_27_at_Sh3kbp1_5end | |||
|id=chrX:156380837..156380851,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.17e-22!18;UBERON:0000948!1.17e-22!18;UBERON:0005498!1.17e-22!18;UBERON:0004140!1.17e-22!18;UBERON:0009881!1.17e-22!18;UBERON:0004141!1.17e-22!18;UBERON:0003084!1.17e-22!18;UBERON:0007005!1.17e-22!18;UBERON:0004139!1.17e-22!18;UBERON:0004291!1.17e-22!18;UBERON:0004535!9.13e-17!23;UBERON:0001009!9.13e-17!23;UBERON:0004872!2.16e-10!33;UBERON:0003103!4.50e-08!43;UBERON:0003914!5.47e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.75e-72,18;UBERON:0000948,5.75e-72,18;UBERON:0005498,5.75e-72,18;UBERON:0004140,5.75e-72,18;UBERON:0009881,5.75e-72,18;UBERON:0004141,5.75e-72,18;UBERON:0003084,5.75e-72,18;UBERON:0007005,5.75e-72,18;UBERON:0004139,5.75e-72,18;UBERON:0004291,5.75e-72,18;UBERON:0004535,4.76e-56,23;UBERON:0001009,4.76e-56,23;UBERON:0004872,1.16e-38,33;UBERON:0003103,2.42e-29,43;UBERON:0003914,1.01e-26,47;UBERON:0003081,1.02e-13,87;UBERON:0010314,6.98e-13,92;UBERON:0000025,4.57e-10,114;UBERON:0000926,1.78e-09,120;UBERON:0004120,1.78e-09,120;UBERON:0006603,1.78e-09,120;UBERON:0004111,2.72e-09,122;UBERON:0001048,2.68e-08,134 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485300549842228,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,3.31401236056803,3.51789089971644,3.96136535214233,5.44512891845984,5.70616272067471,5.24508183817086,7.90615412151387,8.04820204198858,8.4071046504362,6.41783414662574,5.25335885053105,2.83740833410495,1.31579988682799,2.63460138349261,1.74468344388483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0,0.315270288212382,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0.252697211763798,0,0,0.280924522409647,0.0640251524048693,0.114870937911227,0.476293691283074,0.231768651889711,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0,0.145346416632329,0.282328141245992,0.169229215783353,0.548783918618318,0.526139422875686,0.407412341537585,0,0.593175090620871,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p27@Sh3kbp1 | |||
}} |
Revision as of 19:35, 14 September 2013
Short description: | p27@Sh3kbp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_27_at_Sh3kbp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | 0bp_to_ENSMUST00000142426_5end |
EntrezGene: | Sh3kbp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 5.75e-72 | 18 |
heart | 5.75e-72 | 18 |
primitive heart tube | 5.75e-72 | 18 |
primary heart field | 5.75e-72 | 18 |
anterior lateral plate mesoderm | 5.75e-72 | 18 |
heart tube | 5.75e-72 | 18 |
heart primordium | 5.75e-72 | 18 |
cardiac mesoderm | 5.75e-72 | 18 |
cardiogenic plate | 5.75e-72 | 18 |
heart rudiment | 5.75e-72 | 18 |
cardiovascular system | 4.76e-56 | 23 |
circulatory system | 4.76e-56 | 23 |
splanchnic layer of lateral plate mesoderm | 1.16e-38 | 33 |
compound organ | 2.42e-29 | 43 |
epithelial tube | 1.01e-26 | 47 |
lateral plate mesoderm | 1.02e-13 | 87 |
structure with developmental contribution from neural crest | 6.98e-13 | 92 |
tube | 4.57e-10 | 114 |
mesoderm | 1.78e-09 | 120 |
mesoderm-derived structure | 1.78e-09 | 120 |
presumptive mesoderm | 1.78e-09 | 120 |
anatomical conduit | 2.72e-09 | 122 |
primordium | 2.68e-08 | 134 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.