FFCP PHASE1:Mm9::chrX:20194574..20194597,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=104130|HGNC=|MCL_coexpression_id=19|UniProt=B1AV40,O09111|association_with_transcript=92bp_to_NM_019435,uc009ste.2_5end|description=CAGE_peak_5_at_Ndufb11_5end|id=chrX:20194574..20194597,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!2.13e-22!18;UBERON:0000948!2.13e-22!18;UBERON:0005498!2.13e-22!18;UBERON:0004140!2.13e-22!18;UBERON:0009881!2.13e-22!18;UBERON:0004141!2.13e-22!18;UBERON:0003084!2.13e-22!18;UBERON:0007005!2.13e-22!18;UBERON:0004139!2.13e-22!18;UBERON:0004291!2.13e-22!18;UBERON:0004535!2.34e-18!23;UBERON:0001009!2.34e-18!23;UBERON:0004872!9.91e-14!33;UBERON:0003103!1.47e-10!43;UBERON:0003914!6.57e-08!47;UBERON:0003081!1.27e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.43e-62,18;UBERON:0000948,2.43e-62,18;UBERON:0005498,2.43e-62,18;UBERON:0004140,2.43e-62,18;UBERON:0009881,2.43e-62,18;UBERON:0004141,2.43e-62,18;UBERON:0003084,2.43e-62,18;UBERON:0007005,2.43e-62,18;UBERON:0004139,2.43e-62,18;UBERON:0004291,2.43e-62,18;UBERON:0004535,1.31e-48,23;UBERON:0001009,1.31e-48,23;UBERON:0004872,1.31e-33,33;UBERON:0003103,1.45e-25,43;UBERON:0003914,2.65e-23,47;UBERON:0003081,4.52e-12,87;UBERON:0010314,2.39e-11,92;UBERON:0000025,6.50e-09,114;UBERON:0000926,2.11e-08,120;UBERON:0004120,2.11e-08,120;UBERON:0006603,2.11e-08,120;UBERON:0004111,3.05e-08,122;UBERON:0001048,2.21e-07,134|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0.202475267389826,0,0,0.274228867211478,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0.336093799142464,0,0.573066879877513,1.03134418455488,0,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.311068836925433,0,0.210324961351382,0,0,0,0.191690942036473,0,0,0,0,0,0.0914876436024097,0,0.279182999001381,0,0,0,0.142371680799103,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0.220841518460394,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0.621377317606506,0.234526059981096,0.900310307305074,1.42046841351126,1.37734962223183,2.00547246753592,2.09280550275367,3.75582761959467,2.6856028744449,4.44311594766397,3.447516745661,3.56702762001765,4.09359964790931,2.85415149878366,2.81833479396781,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0.274561413188081,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0.952587382566147,0.115884325944855,0,0,0,0.342869252385415,0,0.238436189947321,0,0.188218760830661,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0|short_description=p5@Ndufb11}} | ||
|EntrezGene=104130 | |||
|HGNC= | |||
|MCL_coexpression_id=19 | |||
|UniProt=B1AV40,O09111 | |||
|association_with_transcript=92bp_to_NM_019435,uc009ste.2_5end | |||
|description=CAGE_peak_5_at_Ndufb11_5end | |||
|id=chrX:20194574..20194597,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!2.13e-22!18;UBERON:0000948!2.13e-22!18;UBERON:0005498!2.13e-22!18;UBERON:0004140!2.13e-22!18;UBERON:0009881!2.13e-22!18;UBERON:0004141!2.13e-22!18;UBERON:0003084!2.13e-22!18;UBERON:0007005!2.13e-22!18;UBERON:0004139!2.13e-22!18;UBERON:0004291!2.13e-22!18;UBERON:0004535!2.34e-18!23;UBERON:0001009!2.34e-18!23;UBERON:0004872!9.91e-14!33;UBERON:0003103!1.47e-10!43;UBERON:0003914!6.57e-08!47;UBERON:0003081!1.27e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.43e-62,18;UBERON:0000948,2.43e-62,18;UBERON:0005498,2.43e-62,18;UBERON:0004140,2.43e-62,18;UBERON:0009881,2.43e-62,18;UBERON:0004141,2.43e-62,18;UBERON:0003084,2.43e-62,18;UBERON:0007005,2.43e-62,18;UBERON:0004139,2.43e-62,18;UBERON:0004291,2.43e-62,18;UBERON:0004535,1.31e-48,23;UBERON:0001009,1.31e-48,23;UBERON:0004872,1.31e-33,33;UBERON:0003103,1.45e-25,43;UBERON:0003914,2.65e-23,47;UBERON:0003081,4.52e-12,87;UBERON:0010314,2.39e-11,92;UBERON:0000025,6.50e-09,114;UBERON:0000926,2.11e-08,120;UBERON:0004120,2.11e-08,120;UBERON:0006603,2.11e-08,120;UBERON:0004111,3.05e-08,122;UBERON:0001048,2.21e-07,134 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0.202475267389826,0,0,0.274228867211478,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0.336093799142464,0,0.573066879877513,1.03134418455488,0,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.311068836925433,0,0.210324961351382,0,0,0,0.191690942036473,0,0,0,0,0,0.0914876436024097,0,0.279182999001381,0,0,0,0.142371680799103,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0.220841518460394,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0.621377317606506,0.234526059981096,0.900310307305074,1.42046841351126,1.37734962223183,2.00547246753592,2.09280550275367,3.75582761959467,2.6856028744449,4.44311594766397,3.447516745661,3.56702762001765,4.09359964790931,2.85415149878366,2.81833479396781,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0.274561413188081,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0.952587382566147,0.115884325944855,0,0,0,0.342869252385415,0,0.238436189947321,0,0.188218760830661,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |||
|short_description=p5@Ndufb11 | |||
}} |
Revision as of 19:42, 14 September 2013
Short description: | p5@Ndufb11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ndufb11_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | 92bp_to_NM_019435, uc009ste.2_5end |
EntrezGene: | Ndufb11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 2.43e-62 | 18 |
heart | 2.43e-62 | 18 |
primitive heart tube | 2.43e-62 | 18 |
primary heart field | 2.43e-62 | 18 |
anterior lateral plate mesoderm | 2.43e-62 | 18 |
heart tube | 2.43e-62 | 18 |
heart primordium | 2.43e-62 | 18 |
cardiac mesoderm | 2.43e-62 | 18 |
cardiogenic plate | 2.43e-62 | 18 |
heart rudiment | 2.43e-62 | 18 |
cardiovascular system | 1.31e-48 | 23 |
circulatory system | 1.31e-48 | 23 |
splanchnic layer of lateral plate mesoderm | 1.31e-33 | 33 |
compound organ | 1.45e-25 | 43 |
epithelial tube | 2.65e-23 | 47 |
lateral plate mesoderm | 4.52e-12 | 87 |
structure with developmental contribution from neural crest | 2.39e-11 | 92 |
tube | 6.50e-09 | 114 |
mesoderm | 2.11e-08 | 120 |
mesoderm-derived structure | 2.11e-08 | 120 |
presumptive mesoderm | 2.11e-08 | 120 |
anatomical conduit | 3.05e-08 | 122 |
primordium | 2.21e-07 | 134 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.