FFCP PHASE1:Hg19::chr1:149230680..149230703,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-12bp_to_ENST00000443018,uc010pbe.1_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_ENST00000443018_5end,CAGE_peak_1_at_uc010pbe.1_5end | |||
|id=chr1:149230680..149230703,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.00e-14;12!CL:0000632;2.32e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.00e-14,12;CL:0000632,2.32e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.88e-07;3!UBERON:0006215;2.88e-07;3!UBERON:0003057;2.88e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.58e-21!57;UBERON:0005068!1.58e-21!57;UBERON:0006241!1.58e-21!57;UBERON:0007135!1.58e-21!57;UBERON:0007023!7.36e-20!115;UBERON:0001017!2.34e-18!82;UBERON:0005743!4.50e-17!86;UBERON:0002346!4.14e-16!90;UBERON:0002020!4.81e-16!34;UBERON:0003528!4.81e-16!34;UBERON:0003075!5.75e-16!86;UBERON:0007284!5.75e-16!86;UBERON:0000073!8.28e-16!94;UBERON:0001016!8.28e-16!94;UBERON:0002616!1.19e-15!59;UBERON:0002791!6.77e-15!33;UBERON:0002780!2.26e-14!41;UBERON:0001890!2.26e-14!41;UBERON:0006240!2.26e-14!41;UBERON:0001893!2.52e-14!34;UBERON:0003080!6.62e-14!42;UBERON:0000955!2.43e-13!69;UBERON:0006238!2.43e-13!69;UBERON:0002308!2.30e-12!9;UBERON:0000125!2.30e-12!9;UBERON:0001869!3.84e-12!32;UBERON:0000025!7.65e-11!194;UBERON:0003056!5.20e-10!61;UBERON:0002420!1.12e-09!9;UBERON:0007245!1.12e-09!9;UBERON:0010009!1.12e-09!9;UBERON:0010011!1.12e-09!9;UBERON:0000454!1.12e-09!9;UBERON:0009663!1.94e-09!7;UBERON:0000924!2.52e-09!173;UBERON:0006601!2.52e-09!173;UBERON:0003076!3.33e-09!15;UBERON:0003057!3.33e-09!15;UBERON:0004121!4.61e-09!169;UBERON:0002619!5.65e-09!22;UBERON:0001950!1.86e-08!20;UBERON:0004111!5.96e-08!241;UBERON:0002298!9.47e-08!8;UBERON:0000956!1.24e-07!25;UBERON:0000203!1.24e-07!25;UBERON:0002240!3.83e-07!3;UBERON:0000477!4.57e-07!286;UBERON:0000033!5.67e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.21e-24;19!UBERON:0006925;4.21e-24;19!UBERON:0002423;2.30e-18;25!UBERON:0002365;2.49e-15;31!UBERON:0002330;2.49e-15;31!UBERON:0002368;2.55e-12;33!UBERON:0001897;2.85e-10;2!UBERON:0001875;2.85e-10;2!UBERON:0006514;2.85e-10;2!UBERON:0010225;2.85e-10;2!UBERON:0000949;1.15e-09;43!UBERON:0002240;2.88e-07;3!UBERON:0005174;2.88e-07;3!UBERON:0001137;2.88e-07;3!UBERON:0005172;3.36e-07;52!UBERON:0005173;3.36e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.21e-24,19;UBERON:0006925,4.21e-24,19;UBERON:0008836,4.21e-24,19;UBERON:0008835,7.62e-21,22;UBERON:0003894,7.62e-21,22;UBERON:0009854,6.02e-20,23;UBERON:0007499,2.30e-18,25;UBERON:0009497,2.30e-18,25;UBERON:0000015,2.30e-18,25;UBERON:0002423,2.30e-18,25;UBERON:0006235,2.30e-18,25;UBERON:0004161,2.30e-18,25;UBERON:0009856,1.15e-17,26;UBERON:0002365,7.70e-15,31;UBERON:0002330,7.70e-15,31;UBERON:0002368,3.71e-13,35;UBERON:0001897,2.72e-10,2;UBERON:0010225,2.72e-10,2;UBERON:0000949,2.99e-10,45;UBERON:0001875,3.27e-10,2;UBERON:0006514,3.27e-10,2;UBERON:0003929,1.51e-08,54;UBERON:0005172,1.51e-08,54;UBERON:0005173,1.51e-08,54;UBERON:0002530,7.98e-08,59;UBERON:0002417,1.08e-07,60;UBERON:0000916,1.08e-07,60;UBERON:0002240,2.47e-07,3;UBERON:0005174,2.47e-07,3;UBERON:0001137,2.47e-07,3;UBERON:0000025,5.43e-07,192 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0.24406205754817,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0.404132016209064,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397589304964456,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,11.4079531339648,7.86261773342101,5.90789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0.146508179271894,0.849523652246594,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0.552567831062295,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.241192877250816,0,0,1.77328571372128,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0.498635045700469,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0.137041924646751,0,0.0633107959558787,0,0,0.426905989478705,0,0,0.916292769327325,0.171594997861965,0,0,0,0,0,0,0,1.20084057741958,0.273810757783986,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0.825236619583403,0.83088067605837,0,0,0,0,0,0.209818352539992,0,0.179287339332845,0,0,0,0.5085370753095,0,0,0,0,0,0,0,3.95691030930823,0,0.258565912723101,0.13223260174269,0.342173675768659,0,0,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.250381861413,0,0.332787154610557,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764467467344097,0,0.637724760305049,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.41023272848151,0.756215088665154,0.0691572524642179,0,0,0,0.11796972334774,0,0,0,0,0,0,0.20170506870352,0,0.523813388962845,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0.156986185701028,0.314231179832004,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39265542612958,0.118920090777569,0,0,0,0.0771741581079447,0,0,0,0,1.96308467114945,0.297046400327086,0.4226557275834,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0.437062287854782,0,0.203977659483963,0,0,0,0,0,1.65833887891756,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000443018,p1@uc010pbe.1 | |||
}} |
Revision as of 20:36, 10 January 2014
Short description: | p1@ENST00000443018, p1@uc010pbe.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000443018_5end, CAGE_peak_1_at_uc010pbe.1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -12bp_to_ENST00000443018, uc010pbe.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.00e-14 | 12 |
hepatic stellate cell | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 4.21e-24 | 19 |
digestive gland | 4.21e-24 | 19 |
liver bud | 4.21e-24 | 19 |
hepatic diverticulum | 7.62e-21 | 22 |
liver primordium | 7.62e-21 | 22 |
digestive tract diverticulum | 6.02e-20 | 23 |
epithelial sac | 2.30e-18 | 25 |
epithelium of foregut-midgut junction | 2.30e-18 | 25 |
anatomical boundary | 2.30e-18 | 25 |
hepatobiliary system | 2.30e-18 | 25 |
foregut-midgut junction | 2.30e-18 | 25 |
septum transversum | 2.30e-18 | 25 |
sac | 1.15e-17 | 26 |
exocrine gland | 7.70e-15 | 31 |
exocrine system | 7.70e-15 | 31 |
endocrine gland | 3.71e-13 | 35 |
dorsal plus ventral thalamus | 2.72e-10 | 2 |
thalamic complex | 2.72e-10 | 2 |
endocrine system | 2.99e-10 | 45 |
globus pallidus | 3.27e-10 | 2 |
pallidum | 3.27e-10 | 2 |
gut epithelium | 1.51e-08 | 54 |
abdomen element | 1.51e-08 | 54 |
abdominal segment element | 1.51e-08 | 54 |
gland | 7.98e-08 | 59 |
abdominal segment of trunk | 1.08e-07 | 60 |
abdomen | 1.08e-07 | 60 |
spinal cord | 2.47e-07 | 3 |
dorsal region element | 2.47e-07 | 3 |
dorsum | 2.47e-07 | 3 |
tube | 5.43e-07 | 192 |