FFCP PHASE1:Hg19::chr1:161276191..161276202,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4359 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7225 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-29bp_to_ENST00000476410_5end | |||
|coexpression_cluster_id=C291 | |||
|description=CAGE_peak_6_at_MPZ_5end | |||
|id=chr1:161276191..161276202,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000775;5.96e-34;3!CL:0000094;1.07e-13;8!CL:0000081;2.37e-10;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,5.96e-34,3;CL:0000094,1.07e-13,8;CL:0000081,2.37e-10,11 | |||
|ontology_enrichment_development_v019=UBERON:0006241;4.27e-34;3!UBERON:0003057;4.27e-34;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.44e-42!57;UBERON:0005068!2.44e-42!57;UBERON:0006241!2.44e-42!57;UBERON:0007135!2.44e-42!57;UBERON:0002020!4.55e-40!34;UBERON:0003528!4.55e-40!34;UBERON:0001893!9.92e-40!34;UBERON:0002791!5.67e-38!33;UBERON:0002616!1.05e-37!59;UBERON:0001869!1.61e-35!32;UBERON:0002780!1.03e-34!41;UBERON:0001890!1.03e-34!41;UBERON:0006240!1.03e-34!41;UBERON:0005743!5.23e-34!86;UBERON:0001017!5.80e-34!82;UBERON:0003080!9.99e-34!42;UBERON:0002619!4.22e-33!22;UBERON:0000955!2.16e-32!69;UBERON:0006238!2.16e-32!69;UBERON:0000956!6.13e-32!25;UBERON:0000203!6.13e-32!25;UBERON:0002346!1.05e-30!90;UBERON:0003075!1.14e-30!86;UBERON:0007284!1.14e-30!86;UBERON:0000073!7.95e-30!94;UBERON:0001016!7.95e-30!94;UBERON:0007023!2.62e-29!115;UBERON:0001950!1.76e-28!20;UBERON:0003056!4.58e-23!61;UBERON:0000153!1.19e-20!129;UBERON:0007811!1.19e-20!129;UBERON:0000033!2.15e-19!123;UBERON:0000924!1.12e-16!173;UBERON:0006601!1.12e-16!173;UBERON:0004121!2.74e-16!169;UBERON:0001871!4.61e-12!7;UBERON:0002298!3.84e-11!8;UBERON:0000025!4.21e-11!194;UBERON:0000200!1.29e-10!6;UBERON:0003076!1.12e-09!15;UBERON:0003057!1.12e-09!15;UBERON:0002308!1.44e-09!9;UBERON:0000125!1.44e-09!9;UBERON:0001872!6.08e-09!5;UBERON:0000349!8.24e-09!5;UBERON:0002771!8.85e-09!3;UBERON:0006331!1.73e-08!3;UBERON:0004111!2.57e-08!241;UBERON:0002021!3.63e-08!5;UBERON:0000988!5.75e-08!3;UBERON:0000475!7.37e-08!365;UBERON:0000064!1.78e-07!219;UBERON:0002420!4.58e-07!9;UBERON:0007245!4.58e-07!9;UBERON:0010009!4.58e-07!9;UBERON:0010011!4.58e-07!9;UBERON:0000454!4.58e-07!9;UBERON:0004733!7.77e-07!12;UBERON:0002028!7.77e-07!12;UBERON:0007277!7.77e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;4.27e-34;3!UBERON:0005174;4.27e-34;3!UBERON:0001137;4.27e-34;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,4.27e-34,3;UBERON:0005174,4.27e-34,3;UBERON:0001137,4.27e-34,3;UBERON:0003076,5.55e-08,15;UBERON:0003057,5.55e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398927315243264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184099797284599,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0.254094624222463,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0.443175571691151,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.558564802544508,0,0,0,0,0,0.134366944973453,0,0,0.0787831823072236,0,0.13480708770837,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0.610131324509816,0.250381861413,0,0.221858103073705,0.310482014706917,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.128458450192919,0,0.319267718114302,0.205116364240755,0.252071696221718,0.0691572524642179,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.253663240775627,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0.263091094251396,0,0,0,0.157115589916002,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.392616934229891,0,19.8648191964198,0,0,0,0,0,0,0,0,0,0.860037498908708,0,0.339957450954573,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0.213233981900981,0.476128862927481,0,0,0,0,0,0.217716747896961,0.684466602170562,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@MPZ | |||
}} |
Revision as of 21:55, 10 January 2014
Short description: | p6@MPZ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MPZ_5end |
Coexpression cluster: | C291_spinal_substantia_retina_medulla_tongue_skeletal_trachea |
Association with transcript: | -29bp_to_ENST00000476410_5end |
EntrezGene: | MPZ |
HGNC: | 7225 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 5.96e-34 | 3 |
granulocyte | 1.07e-13 | 8 |
blood cell | 2.37e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 4.27e-34 | 3 |
dorsal region element | 4.27e-34 | 3 |
dorsum | 4.27e-34 | 3 |
posterior neural tube | 5.55e-08 | 15 |
chordal neural plate | 5.55e-08 | 15 |