FFCP PHASE1:Hg19::chr1:216219005..216219021,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_at_chr1:216219005..216219021,+ | |||
|id=chr1:216219005..216219021,+ | |||
|ontology_enrichment_celltype=CL:0000147!3.34e-19!14;CL:0000149!8.70e-18!4;CL:0002586!1.29e-13!3;CL:0002504!3.38e-13!3;CL:1000279!3.38e-13!3;CL:1000280!3.38e-13!3;CL:0000710!1.61e-12!20;CL:0000064!2.51e-12!3;CL:0005012!2.51e-12!3;CL:0000067!2.51e-12!3;CL:0002304!2.51e-12!3;CL:0000148!3.16e-11!10;CL:0000541!3.16e-11!10;CL:0000075!6.32e-09!27;CL:0000325!1.43e-07!39;CL:0002540!2.84e-07!6;CL:0002077!4.58e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.75e-55;10!CL:0000147;1.25e-39;14!CL:0002540;3.02e-33;6!CL:0000710;7.32e-28;20!CL:0002566;2.10e-23;1!CL:0000075;1.00e-20;27!CL:0002092;2.75e-20;10!CL:0002077;1.30e-15;34!CL:0002567;9.66e-09;3!CL:0002504;1.40e-08;3!CL:1000279;1.40e-08;3!CL:1000280;1.40e-08;3!CL:0000149;8.37e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.60e-55,10;CL:0000541,2.60e-55,10;CL:0000147,1.20e-39,14;CL:0002540,2.86e-33,6;CL:0000710,7.11e-28,20;CL:0002566,2.10e-23,1;CL:0000075,9.81e-21,27;CL:0002092,2.66e-20,10;CL:0002077,1.60e-16,34;CL:0000333,4.11e-13,41;CL:0000133,2.72e-09,59;CL:0002567,9.66e-09,3;CL:0002504,1.51e-08,3;CL:1000279,1.51e-08,3;CL:1000280,1.51e-08,3;CL:0000221,1.12e-07,72;CL:0000149,8.14e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001781!1.29e-13!3;UBERON:0001782!1.29e-13!3;UBERON:0005424!1.29e-13!3;UBERON:0007625!6.44e-13!11;UBERON:0001778!2.51e-12!3;UBERON:0001775!2.51e-12!3;UBERON:0000488!2.28e-09!4;UBERON:0000966!2.43e-08!5;UBERON:0005388!2.43e-08!5;UBERON:0001802!2.43e-08!5;UBERON:0000019!3.24e-07!19;UBERON:0000047!3.24e-07!19;UBERON:0004088!3.24e-07!19;UBERON:0003072!3.24e-07!19;UBERON:0003071!3.24e-07!19;UBERON:0004128!3.24e-07!19;UBERON:0000970!8.00e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002371;4.92e-17;12!UBERON:0001474;1.36e-11;18!UBERON:0004765;3.20e-08;26!UBERON:0002405;6.13e-08;27 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794455084879313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6828778689458,4.58386110669933,0,0,9.25447434329912,2.40274446275134,6.00235508524214,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0.328014645699706,0.650756789328606,0,0.366277859273374,0.82509499920588,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,1.09814811894422,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606596470166591,0,0,0,0,0,0.233713309847224,0,1.32582103692562,2.0125432140206,1.77962244319307,0,0.151230923763239,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:216219005..216219021,+ | |||
}} |
Revision as of 00:11, 11 January 2014
Short description: | p@chr1:216219005..216219021, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:216219005..216219021, + |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.60e-55 | 10 |
melanoblast | 2.60e-55 | 10 |
pigment cell | 1.20e-39 | 14 |
mesenchymal stem cell of the bone marrow | 2.86e-33 | 6 |
neurecto-epithelial cell | 7.11e-28 | 20 |
dark melanocyte | 2.10e-23 | 1 |
columnar/cuboidal epithelial cell | 9.81e-21 | 27 |
bone marrow cell | 2.66e-20 | 10 |
ecto-epithelial cell | 1.60e-16 | 34 |
migratory neural crest cell | 4.11e-13 | 41 |
neurectodermal cell | 2.72e-09 | 59 |
light melanocyte | 9.66e-09 | 3 |
enteric smooth muscle cell | 1.51e-08 | 3 |
smooth muscle cell of large intestine | 1.51e-08 | 3 |
smooth muscle cell of colon | 1.51e-08 | 3 |
ectodermal cell | 1.12e-07 | 72 |
visual pigment cell | 8.14e-07 | 4 |