FFCP PHASE1:Hg19::chr1:236140794..236140806,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C932 | |||
|description=CAGE_peak_at_chr1:236140794..236140806,- | |||
|id=chr1:236140794..236140806,- | |||
|ontology_enrichment_celltype=CL:0000055!3.13e-12!180;CL:0000057!3.26e-12!75;CL:0002620!1.00e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002549;8.59e-21;2!CL:0002615;1.78e-14;3!CL:0002144;3.38e-14;3!CL:0000136;1.03e-12;13!CL:0000511;2.81e-11;1!CL:0002625;2.81e-11;1!CL:0000216;2.81e-11;1!CL:0002616;2.81e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002549,4.25e-21,2;CL:0002144,2.59e-14,3;CL:0002615,2.77e-14,3;CL:0002616,1.45e-11,1;CL:0000511,2.18e-11,1;CL:0002625,2.18e-11,1;CL:0000216,2.18e-11,1;CL:0000136,4.81e-11,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005629;8.59e-21;2!UBERON:0005358;8.59e-21;2!UBERON:0001886;8.59e-21;2!UBERON:0004086;8.59e-21;2!UBERON:0005282;8.59e-21;2!UBERON:0005281;8.59e-21;2!UBERON:0010523;3.38e-14;3!UBERON:0001915;3.38e-14;3!UBERON:0001982;3.38e-14;3!UBERON:0001136;2.81e-11;1!UBERON:0001343;2.81e-11;1!UBERON:0004910;2.81e-11;1!UBERON:0004813;2.81e-11;1!UBERON:0005284;6.96e-09;5!UBERON:0003688;1.11e-07;6!UBERON:0002358;1.11e-07;6!UBERON:0003684;1.11e-07;6!UBERON:0001178;1.11e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,4.25e-21,2;UBERON:0005358,4.25e-21,2;UBERON:0001886,4.25e-21,2;UBERON:0004086,4.25e-21,2;UBERON:0005282,4.25e-21,2;UBERON:0005281,4.25e-21,2;UBERON:0010523,2.59e-14,3;UBERON:0001915,2.59e-14,3;UBERON:0001982,2.59e-14,3;UBERON:0001136,2.18e-11,1;UBERON:0001343,2.18e-11,1;UBERON:0004910,2.18e-11,1;UBERON:0005154,2.18e-11,1;UBERON:0005295,2.18e-11,1;UBERON:0004813,2.18e-11,1;UBERON:0005297,2.18e-11,1;UBERON:0005294,2.18e-11,1;UBERON:0010141,2.18e-11,1;UBERON:0005891,2.18e-11,1;UBERON:0005284,5.28e-09,5;UBERON:0003688,1.38e-07,6;UBERON:0002358,1.38e-07,6;UBERON:0003684,1.38e-07,6;UBERON:0001178,1.38e-07,6 | |||
|phase1_expression=0.363356758541113,4.71021152560163,0.704772020479856,1.0007329835313,3.12872766099101,1.74467704820074,0,0,0.522371256399677,0,0,0,0,0.37129905888014,0.662794751455832,0,0,0.730310090387373,0,0,0,0,0,0.273748850145768,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,1.20848795132744,0.760272105718513,1.95249646038536,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0.12663051166458,0,1.72101972449288,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0.404132016209064,0.326923806226917,1.51357427644931,1.72852777344,0.234321431833797,0.312160076830321,0,0.149448680551801,0.117434498643765,0.323745888736263,0,0.204154171254893,0,0.309977343527296,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0.113432183160021,0.538168907066586,0.640672166455702,0.423863802319124,0.900273288253207,0.206105058476878,0,0.37223371266318,0.337552664482532,0.194874010322397,0,0,0.484938170456436,0.355009592516614,0.302256294682921,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0.288732895522148,0.925971025153221,0.380508304469197,0,0,0,0,0.148631162288728,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0,1.17217447210047,0,0,0,0.285826432630578,0.112131084345361,0.87192013766656,0.4400297149257,0,0,0.845302752556,0,1.04007436911366,0.257207374262142,0,0.266422179016099,0.57191197463259,9.22456729165453,0,0.325736184293735,0.710783897485092,0,0,0,0,0,0,2.10833939483032,0,0,0,0.434343920002738,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.981531933753119,1.00034104211935,0,0,0.356857977594324,0,0,0.300946099727719,0,0,0,0,0,0.391602314925481,1.71571711905428,0,0,0,0,0,0,1.24053903909388,0.306923946576125,0.841980283299221,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0.120859449591622,0,0,0.34444334449382,0.364182336013434,0.262248829918848,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.183138929636687,0,0,0,1.6068392984416,0.096670718292122,0,0.460511024178389,0.137836572484531,0.214840489736547,0.145016693914229,0.170453254832202,0.178064071293475,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0.38126038784765,0.511795582622668,0.42793898803392,0,0,0.179872457583315,0.54907405947211,0.117812402345686,0.404364963146632,0,0,0,0.974853958525138,0,0.409499734223957,1.27264888758341,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0.286822704408103,0.196498082026242,0.35667105148125,0,0.422215270595328,0.329294892959902,0,0.699869440489966,0,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.628303510868405,0.54323685961004,0,0.183195186803725,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0.19871461170299,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0.429226048136571,0.223171457441873,0.268733889946905,0.360299883542404,0,0.157566364614447,0.329663433524666,0.202210631562555,0.590564889088493,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0.146552233678082,0,0.129282956361551,0.13223260174269,0,0,0,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0,0.554805861502613,0,0.251567901752575,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0.414706207840855,0,0.521745061811734,0.150257608997218,0.380805212168795,0,0.181848659202559,0.107410557042488,0,0.796191777397232,0,0,0.336749488765919,0,0,0,0.260994291965212,0,0,0,0,0.308801447160972,0,0,0,0.168942440653073,0,0,0.303859956177382,0,0,0.132864840313363,0.163565394255844,0.327609848846413,0,0,0,0.106691729694141,0,0,0.184105950251841,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0.352675943690684,1.2249819094128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596748666348824,0,0.20170506870352,0,0,0,0,0,0.781078098613847,0,0,0,0,0.496211178389294,0,0,0.535701835878287,0,0,0.227662191351298,0.177404740325278,0,0,0,0,0,0.222462803784138,0,0,0,0.91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| |||
|short_description=p@chr1:236140794..236140806,- | |||
}} |
Revision as of 00:54, 11 January 2014
Short description: | p@chr1:236140794..236140806, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:236140794..236140806, - |
Coexpression cluster: | C932_Mesenchymal_Adipocyte_Endothelial_Fibroblast_Renal_Pericytes_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 4.25e-21 | 2 |
capillary endothelial cell | 2.59e-14 | 3 |
adipocyte of omentum tissue | 2.77e-14 | 3 |
perirenal adipocyte cell | 1.45e-11 | 1 |
androgen binding protein secreting cell | 2.18e-11 | 1 |
seminiferous tubule epithelial cell | 2.18e-11 | 1 |
Sertoli cell | 2.18e-11 | 1 |
fat cell | 4.81e-11 | 15 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 4.25e-21 | 2 |
ventricle of nervous system | 4.25e-21 | 2 |
choroid plexus | 4.25e-21 | 2 |
brain ventricle | 4.25e-21 | 2 |
ventricular system of brain | 4.25e-21 | 2 |
ventricular system of central nervous system | 4.25e-21 | 2 |
microcirculatory vessel | 2.59e-14 | 3 |
endothelium of capillary | 2.59e-14 | 3 |
capillary | 2.59e-14 | 3 |
mesothelium | 2.18e-11 | 1 |
seminiferous tubule of testis | 2.18e-11 | 1 |
epithelium of male gonad | 2.18e-11 | 1 |
epithelial cord | 2.18e-11 | 1 |
sex cord | 2.18e-11 | 1 |
seminiferous tubule epithelium | 2.18e-11 | 1 |
testis sex cord | 2.18e-11 | 1 |
genital ridge | 2.18e-11 | 1 |
primitive sex cord of indifferent gonad | 2.18e-11 | 1 |
coelomic epithelium | 2.18e-11 | 1 |
brain vasculature | 5.28e-09 | 5 |
omentum | 1.38e-07 | 6 |
peritoneum | 1.38e-07 | 6 |
abdominal cavity | 1.38e-07 | 6 |
visceral peritoneum | 1.38e-07 | 6 |