FFCP PHASE1:Hg19::chr10:35931187..35931200,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:35931187..35931200,- | |||
|id=chr10:35931187..35931200,- | |||
|ontology_enrichment_celltype=CL:0002321!2.83e-08!248;CL:0000055!3.50e-08!180;CL:0000220!1.05e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.18e-07;5!CL:0000359;2.16e-07;32!CL:0000115;8.67e-07;36!CL:0000151;9.70e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.19e-09,250;CL:0000359,2.70e-08,32;CL:0002322,1.18e-07,5;CL:0002078,1.33e-07,45;CL:0000115,1.34e-07,36;CL:0000222,7.46e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!8.50e-15!84;UBERON:0001981!6.95e-11!60;UBERON:0007500!6.95e-11!60;UBERON:0004537!6.95e-11!60;UBERON:0006965!6.95e-11!60;UBERON:0003914!1.33e-09!118;UBERON:0000055!3.36e-09!69;UBERON:0001637!6.46e-09!42;UBERON:0003509!6.46e-09!42;UBERON:0004572!6.46e-09!42;UBERON:0002049!1.82e-08!79;UBERON:0007798!1.82e-08!79;UBERON:0000468!3.99e-08!659;UBERON:0000025!1.25e-07!194;UBERON:0004573!1.99e-07!33;UBERON:0004571!1.99e-07!33;UBERON:0001009!2.77e-07!113;UBERON:0004535!9.58e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.56e-10;33!UBERON:0004571;1.56e-10;33!UBERON:0001637;3.55e-10;42!UBERON:0003509;3.55e-10;42!UBERON:0004572;3.55e-10;42!UBERON:0003513;4.25e-08;7!UBERON:0007500;1.28e-07;56!UBERON:0001981;1.28e-07;56!UBERON:0004537;1.28e-07;56!UBERON:0003914;4.07e-07;74!UBERON:0007100;4.23e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,7.77e-22,83;UBERON:0007500,4.93e-15,59;UBERON:0001981,4.93e-15,59;UBERON:0004537,4.93e-15,59;UBERON:0006965,4.93e-15,59;UBERON:0003914,5.70e-15,117;UBERON:0000055,3.11e-13,68;UBERON:0001637,1.06e-12,42;UBERON:0003509,1.06e-12,42;UBERON:0004572,1.06e-12,42;UBERON:0004573,1.55e-12,33;UBERON:0004571,1.55e-12,33;UBERON:0001009,1.80e-11,112;UBERON:0002049,4.05e-11,78;UBERON:0007798,4.05e-11,78;UBERON:0004535,7.70e-11,109;UBERON:0003513,3.20e-08,7;UBERON:0000025,1.15e-07,192 | |||
|phase1_expression=1.99846217197612,1.07050261945492,0.704772020479856,0,1.34088328328186,0.872338524100369,0,1.26343974685366,0.261185628199839,0.737201809504527,1.39560233594486,0.873765488520689,1.05506791291381,0.123766352960047,0,0,1.80808358407193,0.730310090387373,1.95173119516203,0.246242116153576,0.408001382488506,0,1.71741592278634,0.684372125364421,1.75759695432724,0,0.0821005894499457,0,0,0.383829398097213,0,0,1.204823675113,0,0,0,0,0,0.200544447470142,0.651032612147555,0.223915474239924,0.647787332037959,0,0.290796477559129,0.755751887377619,0.727752183563449,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0,0,0,0.422510572623884,0,0,0.336985893439485,0.600707571366025,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,1.17447437874188,0.764546456250458,0,0,0,0,0.393010762749165,0.205601498999509,0,1.30368906653436,0,0,0,0,0.221533894583621,0,0.128091319725675,0,0.164437904603676,0,0,0.14828656316206,0.535081656179426,0,0.226618685395132,0,0,0,0,0,0,0.150575119077773,0,1.24930726552346,0.473554504088034,0,0.201606743224732,0.802320587350522,0.289648807765598,2.43806866313962,0,0.511450247374121,0.361439152384566,1.50401373190767,1.88300474649071,1.5905718941022,3.40644409211845,0.661743720148475,0.221729397462564,0.351339142772504,1.44076983047484,0.728590576585084,0,0,0,0.531831842075461,0.476981248610684,0,0,1.19257444420023,0,1.04142150482278,0.56530794192401,2.09749718104953,2.20094433552054,0.835979866147242,0.258416759169329,0,1.00416183829401,2.41697590265488,1.52054421143703,5.6134273236079,1.10298924103761,3.24056779152704,0.446498641420399,0.22452937262617,0.337834441449967,0,1.89853131913626,2.01521918323448,0,0,0,0.993943903390637,0.12663051166458,0.264818361626438,1.43418310374407,0.354668382198357,0,2.1349799145941,3.45334567784024,0.933633106199299,1.48181739276657,1.14423332179421,0.908144565869588,2.88087962239999,0,0.312160076830321,0.570471821544449,0.597794722207204,0,0,0.421352420106746,0.408308342509787,0.61417158655884,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0,0,0.901428353439581,0.567160915800105,0.717558542755448,0.640672166455702,0.423863802319124,1.20036438433761,0.309157587715317,0.257640540045629,0.18611685633159,0.168776332241266,0.584622030967192,0.252433774244115,0.276149695926898,0.80823028409406,0.355009592516614,0.403008392910561,0.339121184620975,1.73934767846967,1.63647672354501,0.860413786167011,2.5614478287215,4.24095258628753,2.67246068599892,2.17688215532278,3.28017106138317,1.45990943630332,3.12899064659632,0.643240938192885,2.76269842704961,0,0,0.118306800039844,0.337169380156203,0.241011029883482,0,0.435758888184812,0.71181185733329,0.134831308160164,0,0,2.21446636387394,2.80483547606892,0,2.94017422771084,0,0,0.590789906681404,0,0.368965315629341,0.343135620597051,0.98775256867763,0,0.402115889646523,0.833296006426766,0,0,0,1.507095264676,0.352226082707465,0.577465791044295,0.462985512576611,1.14152491340759,0.790204397959275,0.858486162094873,0.492434012174795,0.468008530278475,0.445893486866185,0,0.839910640994298,0.567100388969546,0.358234090811393,0,1.91691339582606,0,0.352193736052904,1.03664057770386,1.00883967391873,1.13618190083742,1.0159663086747,0.381988425558278,2.34434894420094,0,0.925447434329912,0.600686115687835,0.857479297891735,0.672786506072164,0.43596006883328,0.66004457238855,0.646358578788889,0,0.845302752556,0.26593811658487,2.08014873822732,0,0,0,0.285955987316295,2.17048642156577,0.823240336780769,0.325736184293735,0,0,0.602878754119172,0.871533458600294,0.599837947092342,0,0,0,0.718874566474748,1.14861935834114,0,0.144781306667579,0.410952645100767,0.537182889719687,0,0.985153801009636,0.646882724578552,1.02674429023799,2.7950408664471,0,0,0.837581326671744,1.27587750330633,0,0,0,0.736148950314839,0.500170521059677,0,0,0.178428988797162,0.473107245101804,0.937131319941706,2.40756879782175,4.5481500811197,2.0694614258501,1.32845119707087,0.368738337083406,0,0.587403472388222,1.02943027143257,0,0.647142602455851,0.213455115606889,1.21251028578504,1.66435439510497,2.11673205330776,1.24053903909388,1.38115775959256,1.96462066103151,1.28139149255701,2.55853624533352,0.64341568457443,0,1.07946785661859,0.355123450626254,0.246381468041427,1.03850885836724,0.348631135379878,0.362578348774867,1.00253235151642,0.184161977871793,0,0.364182336013434,0.524497659837696,1.80479845162965,0.770153371044148,3.13739907670742,0,0.949964660035881,6.8240030442538,1.87103075804167,0.215915916102139,10.7959076883203,0.270946437543853,0,0.764628819135115,3.3243040357149,0.895499018888713,0,0.261435451024901,0.769350375349168,0.984043937099117,0.325378394664303,0.515205058238611,0.366277859273374,0.660075999364704,1.14853107599234,1.30012049207304,1.6068392984416,0.580024309752732,0,0.460511024178389,0.413509717453592,0.107420244868274,0,0.0852266274161009,0.890320356467374,0.661139661443912,1.15314040419064,0.382838137483752,1.0115778085555,0,1.5740617341532,1.3940745403212,1.84820148105653,1.59691809095107,0,1.66791797193528,1.43124886741991,0,0.316379424718726,0.190630193923825,0,0.42793898803392,0.636406495851874,2.35484592059769,0.179872457583315,0,0.235624804691373,1.2130948894399,1.58510321173008,1.68503382495592,0.48763373908959,6.09283724078211,1.05650146756755,0,0.282810863907425,0,1.10273068709225,1.99031692572366,1.75380354101505,0,0,0.811641507850816,1.239293992399,0.845086807596724,0,0.294747123039363,1.07001315444375,0,2.74439925886963,0.987884678879706,0,0,1.15466535270614,0,0,0.376575203107117,1.72202149068492,1.68471475667626,1.33029046061003,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0.159426272728822,0,0,0.423347165447766,0.649243880549111,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0.500547425135725,0,0,0,0,0,0,0.561421621224659,1.17206543417515,0.728163130497081,0,0,0.95497793895076,0.890894042497916,2.15012491469462,0,0.562677665642051,0.445234820091624,0,0,1.39473591775749,0,0,0.20453736500431,0,1.24415835064723,0.0898683511473268,0.537063524026827,0.511572370226872,0.493217028184668,0,0,0,0.185536196323703,0,0.260427761085233,0.262379999988587,1.44999915086959,0,0,0.945550727071745,1.72371686620732,0.291604613383254,0.173624994933292,0,0.361789315876224,0,0.442317039724898,0.295547618953547,0.87754158861589,0.21787692703798,0.139423744278603,0.769502585037971,0,0.23056390438806,0,0,0.31900115973192,0.549585560411174,0.533034776018635,0,0,0,0,0.19606253431774,0.167821586975843,0,0,0,0,0,0,0.995261931078505,0.530745387020035,0,0.296521128680622,0.123563938946503,0.208843899010911,0.876214728748802,0.802577647298789,0.937057782901357,0,0,0.971121518136371,0,0,0.61214552326098,0.821425535170343,0.300646838828985,0.933193722575224,2.65861549082874,1.323967823502,1.88359751044335,1.19472429772959,0,0.416024019039416,0.694238953340524,0,0,0.34945333648406,0,0.0967563312890851,0.365446585430928,0.0821154570532092,0.484945082442097,0.529536760149002,0.451961481561065,0.959293472527256,0.19871461170299,0.189932387867636,0,0,0,0.19980960958213,0.288180834308212,0.229073192331831,0.171594997861965,0,0.248505071130865,0,0.815425236441684,0.313808538937,0.101998217636322,0,0,0.684526894459965,0,0.859530882839914,0,0.279282401272254,0.916641696046735,2.15361907373044,0.599037001496973,1.28767814440971,1.11585728720936,1.74677028465488,1.08089965062721,1.16495949527454,0.0787831823072236,0,0,0.984274815147488,0,0.795229689809303,0.817220436669454,3.21506296930038,1.51293380256957,2.49264202817511,0.449947783103001,1.5476039091159,0.121499113316049,0,1.10327990218877,1.99327434912993,0.211200673038813,0.896436696664224,0.383830394638891,0,1.98627591109629,0,0,0.864221491201268,0.326587360109409,0,0.082092520749339,1.70388021785422,0,0.293104467356165,0,0,0.26446520348538,0,0,1.06787412567695,0.157204305099666,1.65695622138878,0.496166021811951,0,0,0,1.08803560673895,0.5013797880454,0,0.327872630709804,0,0,0.244052529803926,0.250381861413,0,1.22021956690538,0.620964029413834,0.138348634936231,0.624902039810533,0,0.285465333544967,0.235265819698172,0,0.28984205722165,0.597019211547496,0,0,0.757612021100357,0.251567901752575,0,2.74608082076308,0.453692771289717,0.466311601748341,1.77426179987561,0.318593534327405,3.14862178514523,0.310525913752519,0.829412415681711,0.797525143673985,1.04349012362347,0.901545653983311,0.380805212168795,1.22061219961398,1.27294061441792,0.751873899297419,0.464033759878494,0.796191777397232,0,0,0,1.26184898228651,0,0,0.260994291965212,0.680117776536817,0,0.244736704506468,0.895444205407437,0.926404341482917,0.219284049578707,0.176689145945881,0.192914038270915,0.337884881306145,0.256241518587947,0,0.303859956177382,0.276516872303462,0.389720617678777,0.265729680626726,0.327130788511688,0.655219697692825,0.737318726261158,0,0,0.320075189082423,0,0,0.552317850755522,0,0,0.511577485214607,0,1.41539347670307,1.09209638192014,0.509197589862076,0.212574920101683,0.991486114072017,2.23457967189298,0.318004350653419,0.47317047000752,0,0.352675943690684,0.918736432059601,0.192687675289379,0,0.478901577171454,0.615349092722265,0.504143392443436,0.345786262321089,0.161475645631851,0,0,0.471878893390961,0,0,1.52552838186867,4.8325194824207,3.1826595538604,0.752103283492572,0.60511520611056,1.56302802246618,0,0,0.147856086217045,0.472763092328763,0,0.826747186004736,0.380494861163441,2.18789923607288,0,0,0,0.383287282918786,1.60710550763486,0.336283722218824,0,0.227662191351298,0.354809480650555,0,0,0.815636795721981,0.591954962065642,0,0.444925607568277,0.39246546425257,0.157115589916002,0.560544326627578,0,0.647782773655864,0.47775168788705,1.35805433935647,0.94808167039636,0,0.347716544605159,0.801711364730253,1.03608082081518,1.19502933965765,2.07377898544228,0.430227358820278,3.90495602410866,3.66417640464378,0,0.22910686854405,3.41227024230752,2.8666168169323,0,0.196300467230486,0.243835849964539,0,0.718639647993729,0,0,1.40363678077263,2.98426162742052,2.02164154321867,1.1294608203896,0.219881033490858,0.301925687133347,0.617393264863557,0.437119121007915,0,0.245148321753905,1.41405928260976,0.196308467114945,0.594092800654172,0.4226557275834,0.679708458751268,1.03382309777839,1.09578409555081,0,0.178553938605658,0.352894871715692,0,0.730336388246517,0,0.143339583151451,1.26217249754548,0.611923411718232,0.872701380680755,0,0.371995018166751,2.77305377178851,0,1.26166424835079,3.16870158694717,8.2354025657434,1.52983244612973,0.801652215796681,0.643264296743914,0.50141507858475,1.06090177505535,0.267964130156178,0,0.724030971033267,0.213233981900981,0.476128862927481,0.0645889098360061,0.248298857183432,0.448527450322454,0.763765899337979,0.606351566874658,0.653150243690884,0.684466602170562,0.202056159043763,1.00411087549747,0.665320713092027,0,0,0,0.0898252021065869,0,0.366724332548599,0.813792356631477,0.665756774185513,0.201273793591026,0 | |||
|short_description=p@chr10:35931187..35931200,- | |||
}} |
Revision as of 02:35, 11 January 2014
Short description: | p@chr10:35931187..35931200, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:35931187..35931200, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.19e-09 | 250 |
vascular associated smooth muscle cell | 2.70e-08 | 32 |
embryonic stem cell | 1.18e-07 | 5 |
meso-epithelial cell | 1.33e-07 | 45 |
endothelial cell | 1.34e-07 | 36 |
mesodermal cell | 7.46e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 7.77e-22 | 83 |
epithelial tube open at both ends | 4.93e-15 | 59 |
blood vessel | 4.93e-15 | 59 |
blood vasculature | 4.93e-15 | 59 |
vascular cord | 4.93e-15 | 59 |
epithelial tube | 5.70e-15 | 117 |
vessel | 3.11e-13 | 68 |
artery | 1.06e-12 | 42 |
arterial blood vessel | 1.06e-12 | 42 |
arterial system | 1.06e-12 | 42 |
systemic artery | 1.55e-12 | 33 |
systemic arterial system | 1.55e-12 | 33 |
circulatory system | 1.80e-11 | 112 |
vasculature | 4.05e-11 | 78 |
vascular system | 4.05e-11 | 78 |
cardiovascular system | 7.70e-11 | 109 |
trunk blood vessel | 3.20e-08 | 7 |
tube | 1.15e-07 | 192 |