FFCP PHASE1:Hg19::chr10:108096806..108096825,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:108096806..108096825,- | |||
|id=chr10:108096806..108096825,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002178;1.85e-12;3!CL:0002149;8.25e-07;6!CL:0002255;8.25e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.85e-12,3;CL:0002149,8.02e-07,6;CL:0002255,8.02e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0007123;7.25e-08;5 | |||
|ontology_enrichment_disease=DOID:162!2.98e-11!235;DOID:14566!6.30e-11!239;DOID:0050687!2.29e-09!143;DOID:305!1.31e-08!106;DOID:4960!2.50e-08!1;DOID:0070004!2.50e-08!1;DOID:3151!3.10e-08!1;DOID:3149!3.10e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:3493;5.48e-18;2!DOID:4231;6.48e-18;2!DOID:1907;6.48e-18;2!DOID:1115;1.27e-07;20!DOID:201;7.58e-07;6!DOID:0060100;7.58e-07;6!DOID:3001;8.25e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,5.48e-18,2;DOID:4231,6.48e-18,2;DOID:1907,6.48e-18,2;DOID:1115,1.25e-07,20;DOID:201,7.58e-07,6;DOID:0060100,7.58e-07,6;DOID:3001,8.02e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.62e-61!9;UBERON:0001557!3.08e-28!19;UBERON:0008947!2.00e-13!38;UBERON:0003258!2.00e-13!38;UBERON:0000072!7.59e-11!46;UBERON:0000065!3.15e-09!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;5.35e-08;5!UBERON:0010039;5.35e-08;5!UBERON:0002046;7.25e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,7.01e-08,5;UBERON:0004117,7.01e-08,5;UBERON:0007689,7.01e-08,5;UBERON:0007123,7.01e-08,5;UBERON:0003091,7.01e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0.168584690078102,0.723033089650446,0.330881918197182,0.871517776369625,0.237270619111097,0.539325232640658,0.588664395376038,1.53898862778556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63481878724963,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0.548167698587004,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680117776536817,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516644938982447,0,3.12980115428129,0,0,0,0,0,0,0,0,0,0,0,2.28699060503635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.77236611945176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0,0,0,0,0,1.79410980128981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:108096806..108096825,- | |||
}} |
Revision as of 04:54, 11 January 2014
Short description: | p@chr10:108096806..108096825, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr10:108096806..108096825, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.85e-12 | 3 |
epithelial cell of uterus | 8.02e-07 | 6 |
stromal cell of endometrium | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 7.01e-08 | 5 |
pharyngeal pouch | 7.01e-08 | 5 |
thyroid diverticulum | 7.01e-08 | 5 |
pharyngeal pouch 2 | 7.01e-08 | 5 |
thyroid primordium | 7.01e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 5.48e-18 | 2 |
histiocytoma | 6.48e-18 | 2 |
malignant fibroxanthoma | 6.48e-18 | 2 |
sarcoma | 1.25e-07 | 20 |
connective tissue cancer | 7.58e-07 | 6 |
musculoskeletal system cancer | 7.58e-07 | 6 |
female reproductive endometrioid cancer | 8.02e-07 | 6 |