FFCP PHASE1:Hg19::chr11:2017228..2017236,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283120 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=4713 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-10bp_to_BC106078_5end | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_34_at_H19_5end | |||
|id=chr11:2017228..2017236,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;6.36e-29;19!CL:0002577;4.75e-15;3!CL:0002536;1.31e-10;2!CL:0002575;1.51e-10;2!CL:0002537;1.54e-09;5!CL:0002541;1.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.05e-29,19;CL:0002577,4.54e-15,3;CL:0002536,1.25e-10,2;CL:0002575,1.51e-10,2;CL:0002537,1.54e-09,5;CL:0002541,1.38e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.03e-17!14;UBERON:0000158!1.03e-17!14;UBERON:0001737!6.41e-15!9;UBERON:0001557!2.38e-14!19;UBERON:0003124!7.37e-13!7;UBERON:0000478!1.59e-12!24;UBERON:0001987!4.14e-08!4;UBERON:0004340!4.14e-08!4;UBERON:0004923!2.03e-07!57;UBERON:0003104!4.36e-07!238;UBERON:0009142!4.36e-07!238;UBERON:0000305!5.27e-07!7;UBERON:0000077!8.27e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.65e-31;24!UBERON:0005631;2.76e-23;10!UBERON:0000158;2.76e-23;10!UBERON:0001737;5.13e-23;9!UBERON:0001557;5.13e-23;9!UBERON:0001987;4.75e-19;4!UBERON:0000305;2.14e-17;7!UBERON:0003124;1.38e-07;3!UBERON:0000920;1.38e-07;3!UBERON:0001723;4.53e-07;3!UBERON:0001033;4.53e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.20e-39,14;UBERON:0000158,1.20e-39,14;UBERON:0000478,2.47e-31,24;UBERON:0003124,3.54e-24,7;UBERON:0001737,4.33e-23,9;UBERON:0001987,4.34e-19,4;UBERON:0004340,4.34e-19,4;UBERON:0000305,2.08e-17,7;UBERON:0001557,2.48e-17,19;UBERON:0004871,3.38e-15,8;UBERON:0004923,6.44e-08,66;UBERON:0000072,1.28e-07,47;UBERON:0000920,1.38e-07,3;UBERON:0001723,5.44e-07,3;UBERON:0001033,5.44e-07,3;UBERON:0010056,5.44e-07,3 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0,0,0,1.74467704820074,0,0,0,0,0,5.89791704751465,3.69273769519835,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0.311211035399766,0,0,0.302714855289863,1.72852777344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0,0.504641701751257,0,0,0,0,0,0,1.53798840051797,1.68584690078102,1.44606617930089,0.992645754591546,1.08939722046203,0.71181185733329,1.21348177344148,1.17732879075208,1.92373578473195,0,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,10.8524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15825045334063,0.821905290201534,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0,0,0,0.300946099727719,0,1.03473071292505,0,0,0,3.72022199179207,4.46086450954113,0,0,0,3.33440328590885,9.98612637062982,3.93107381328584,0.992431231275107,0.153461973288062,0,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0.308097234229289,0,0.275673144969061,0,0.290033387828457,0.170453254832202,2.8490251406956,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.632758849437452,0,0,2.56763392820352,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4597352674091,5.3453642549875,20.5797670406485,0,0,0,0,0.211125408127993,0,0,0.503865495708552,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,1.25660702173681,1.08647371922008,8.93203247249374,0.549585560411174,17.0571128325963,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,18.4592858878721,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0.0882561266915003,0.451961481561065,0,0,0,0,0,0,4.79543062997113,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.446342914883745,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472091293214983,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,5.30027555648885,0,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40016658797892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86623178009892,0,0.862598491173454,0,0.54604819096007,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,1.15525666150338,0,0,0,0.0752103283492573,0,0,3.92860041722134,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,1.41923792260222,0,0.171488009437418,0,0,0,0,0.078493092850514,0,0.840816489941367,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.205325613712494,3.4794432940146,2.4285549652957,0,0,0,0,0,0,0,0.218559560503957,0.470317296361523,0,0,0,0,0.4226557275834,0,0,0.386747327841463,0,0.178553938605658,0,0,0,0,0,0,0,0,3.1741610430924,0,0,1.29787968637137,0,0.218531143927391,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,1.1903221573187,0,0.124149428591716,0,0.0636471582781649,0.404234377916439,0.435433495793923,4.79126621519393,0.0673520530145875,0.0717222053926763,0.99798106963804,0,0,0,0,7.03922827210363,0,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p34@H19 | |||
}} |
Revision as of 06:07, 11 January 2014
Short description: | p34@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | -10bp_to_BC106078_5end |
EntrezGene: | H19 |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.05e-29 | 19 |
placental epithelial cell | 4.54e-15 | 3 |
amniotic epithelial cell | 1.25e-10 | 2 |
central nervous system pericyte | 1.51e-10 | 2 |
amnion mesenchymal stem cell | 1.54e-09 | 5 |
chorionic membrane mesenchymal stem cell | 1.38e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.20e-39 | 14 |
membranous layer | 1.20e-39 | 14 |
extraembryonic structure | 2.47e-31 | 24 |
chorion | 3.54e-24 | 7 |
larynx | 4.33e-23 | 9 |
placenta | 4.34e-19 | 4 |
allantois | 4.34e-19 | 4 |
amnion | 2.08e-17 | 7 |
upper respiratory tract | 2.48e-17 | 19 |
somatic layer of lateral plate mesoderm | 3.38e-15 | 8 |
organ component layer | 6.44e-08 | 66 |
segment of respiratory tract | 1.28e-07 | 47 |
egg chorion | 1.38e-07 | 3 |
tongue | 5.44e-07 | 3 |
gustatory system | 5.44e-07 | 3 |
future tongue | 5.44e-07 | 3 |